trnap-ugg_12


Basic Information

Item Value
gene id trnap-ugg_12
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056710.1
NCBI id CM032079.1
chromosome length 20499150
location 4368565 ~ 4368644 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_1895
ggtagcgtggccgagtggtctaaggcgctggatttgggctccagtctctcaggggcgtgggttcgaatccaccgctgcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1895 True 80 tRNA 0.64 1 4368565 4368644

Neighbor

gene id symbol gene type direction distance location
LOC122355129 LOC107560557,LOC107753319,LOC107735415,LOC107694068 coding downstream 131336 4232549 ~ 4237229 (-)
dnajc9 dnajc9,LOC107694081,LOC107684784,LOC107751706,LOC107753312 coding downstream 197643 4167639 ~ 4170922 (-)
p4ha1a p4ha1a,LOC107684765,LOC107753313,LOC107751705,LOC107560551 coding downstream 214690 4139060 ~ 4153875 (-)
ppp1r9bb ppp1r9bb,LOC107741705,LOC107684769,LOC107675672,LOC107713069,LOC107598037,LOC107576248 coding downstream 261321 4088710 ~ 4107244 (-)
trnal-uag_48 NA coding downstream 288383 4080101 ~ 4080182 (-)
LOC122355389 grid1b,grid1,LOC106578986,LOC106589364 coding upstream 561169 4929813 ~ 5055115 (-)
ccser2b LOC107716476,LOC107653247,LOC107727960,LOC107569472,LOC107674460 coding upstream 911737 5280381 ~ 5330233 (-)
pelo pelo,LOC107653258,LOC107674509 coding upstream 991720 5360364 ~ 5367143 (-)
emc9 emc9,LOC107716469,LOC107551848,LOC107674563,LOC107727956,LOC107653261 coding upstream 1047255 5415899 ~ 5419866 (-)
ghdc ghdc,LOC107556765,LOC107727961,LOC107716443,LOC107577004 coding upstream 1108878 5477522 ~ 5486280 (-)
G85553 NA non-coding downstream 55517 4312579 ~ 4313048 (-)
G85551 NA non-coding downstream 56661 4311453 ~ 4311904 (-)
G85545 NA non-coding downstream 83630 4275337 ~ 4284935 (-)
G85541 NA non-coding downstream 98949 4268003 ~ 4269616 (-)
G85515 NA non-coding downstream 180228 4183582 ~ 4188337 (-)
G85569 NA non-coding upstream 42696 4411340 ~ 4412200 (-)
G85572 NA non-coding upstream 84111 4452755 ~ 4453276 (-)
G85868 NA non-coding upstream 1358660 5727304 ~ 5731090 (-)
G85889 tgfb1i1 non-coding upstream 1442013 5810657 ~ 5814446 (-)
G85891 NA non-coding upstream 1451705 5820349 ~ 5821178 (-)
trnal-aag_61 NA other downstream 921 4367565 ~ 4367644 (-)
trnal-uag_59 NA other downstream 2250 4366233 ~ 4366315 (-)
trnal-aag_60 NA other downstream 4405 4364080 ~ 4364160 (-)
trnap-ugg_11 NA other downstream 4567 4363918 ~ 4363998 (-)
trnal-uag_58 NA other downstream 5721 4362763 ~ 4362844 (-)
trnal-uag_60 NA other upstream 1077 4369721 ~ 4369801 (-)
trnal-uag_61 NA other upstream 3385 4372029 ~ 4372110 (-)
trnal-aag_62 NA other upstream 3544 4372188 ~ 4372269 (-)
trnal-uag_62 NA other upstream 4552 4373196 ~ 4373278 (-)
trnal-uag_63 NA other upstream 5722 4374366 ~ 4374448 (-)

Expression


Co-expression Network