G89662


Basic Information

Item Value
gene id G89662
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 655858 ~ 677599 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU132707
TAGAACACAAATACATccattttaatttgagaaaatacaaaaagaaaccATGTACAATTTATGTACAAACTTTTTGTACAAGACAGTATGTTTTATCAGCAGGTTATATTTGACAGAGTCAGGTAGATCAGCTCAGCACCATCAATTTCTTCACGTCTGGTAGTCAAATCAGTCATTCTGCTATAAGAAACCCCATTTTCCTGTAATGAATATGCCAATAATTACATGTGTGAATGgatgttttgattatttattgaaGTGGAAGAAAAGACAGCAACAAAACAGTAATCCATATGCAAGTTCAGCATGTTAAGACTTAGTTCCCTCCAAGTATTTATTCCGTTACAGTGTATTTTCTTTATACAGTTTCTAAAACTTAAATCTGTCCTTTACAGTAGAATAAAATAGCCAAAATATGACAGTTGTGTATTACATAGCACATCAGTAAGGTTGCTTTATATgttactttaattaaaacactCTTGAATACATTGACAGGTGAATCCAACTAAACATCATAGTTCTACTCAGCATCTTTCAGTCATTGCTCTTCCCTTTTCTTGACGTTAgacttcatcatttttttttttttttttttttttttttttttttttttttttttttttttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132707 True 631 lncRNA 0.30 2 655858 677599

Neighbor

gene id symbol gene type direction distance location
zgc:110045 zgc:110045,LOC107582498,LOC107721227,LOC107708438,LOC107678543,LOC108444131,LOC107698144 coding downstream 358903 279249 ~ 296955 (-)
vwc2 vwc2,LOC107589538,LOC107678488,LOC107698155,LOC107721217,LOC107582546 coding downstream 378943 250517 ~ 276915 (-)
ikzf1 ikzf1,LOC107721232,LOC107708437,LOC107698154 coding downstream 433979 197645 ~ 221879 (-)
ttl ttl,LOC107698152,LOC107678537,LOC107721225 coding downstream 465519 184476 ~ 190339 (-)
bag5 LOC107721222,LOC107698150,LOC107589542,LOC107708429,LOC107678581 coding downstream 508872 135035 ~ 146986 (-)
vdac2 vdac2,LOC107690181,LOC108444242,LOC107582506,LOC107747461 coding upstream 344515 1022114 ~ 1029323 (-)
march8 march8,LOC107690179,LOC107708446 coding upstream 355748 1033347 ~ 1120609 (-)
zfand4 zfand4,LOC107582507,LOC107690178,LOC107678595,LOC107747469,LOC107589528 coding upstream 443929 1121528 ~ 1137833 (-)
washc2c LOC107582509,LOC107747458,LOC107678570,LOC107708449,LOC107690188 coding upstream 460509 1138108 ~ 1153163 (-)
alox5a alox5a,alox5,LOC107747471,LOC107690200,LOC107582511,LOC107589586,LOC107678516,LOC107708393 coding upstream 476235 1153834 ~ 1161491 (-)
G89598 NA non-coding downstream 335798 317508 ~ 320060 (-)
G89732 NA non-coding upstream 180203 857802 ~ 937719 (-)
LOC122356996 NA non-coding upstream 255212 932811 ~ 934723 (-)
G89744 NA non-coding upstream 328404 1006003 ~ 1006204 (-)
G89880 NA non-coding upstream 571090 1248689 ~ 1249735 (-)
G89870 si:ch211-198a12.6,LOC107747450,LOC107690167,LOC107589522,LOC107582518,LOC107678580,LOC108263519,LOC108444387,LOC103030417 non-coding upstream 592263 1269862 ~ 1275411 (-)
LOC122356753 LOC107708390,LOC107678530,LOC107589588,LOC107698143 other downstream 416499 223958 ~ 239359 (-)
G89543 NA other downstream 478538 123194 ~ 177320 (-)
G89537 LOC107698151,LOC107582543,LOC107678539,LOC107708436 other downstream 587982 67327 ~ 67876 (-)
LOC122356184 fam63b,LOC107750498,LOC107585989,LOC107670767,LOC107700433 other downstream 597425 36974 ~ 58433 (-)
LOC122356752 tcf4,LOC107675755,LOC107564475 other downstream 623653 17866 ~ 32205 (-)
lrmda c13h10orf11,cunh10orf11,c3h10orf11,cssa18h10orf11,LOC107747465,LOC107678567,LOC107708444,LOC105909757,LOC103041229,LOC107582503 other upstream 9810 687409 ~ 931005 (-)
si:dkey-228d14.5 si:dkey-228d14.5,LOC107747455,LOC107582513,LOC107708394,LOC107589525,LOC107678589,LOC107690177 other upstream 535271 1212870 ~ 1288282 (-)
LOC122356439 LOC107747448,LOC107690165,LOC107678593,LOC107582517,LOC107576986,LOC107708380 other upstream 876631 1554230 ~ 1557047 (-)
LOC122356758 ccdc88a,LOC107571560,LOC107701441,LOC107570323,LOC107695193 other upstream 1006850 1684449 ~ 1692354 (-)
G90161 tp53bp2,LOC107582030,LOC107705014,LOC107742808 other upstream 1474238 2151837 ~ 2245078 (-)

Expression


Co-expression Network