G89675


Basic Information

Item Value
gene id G89675
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 687427 ~ 688449 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU132721
aaaacatattttggatgcaaataatcGTTATGATATatagcaatgcatattttaaatgcataatatataatatacataatatattaatggtTTCATTTGCACTGAAGCAGTAAAAGTACGAGAACTGTGTCTGTAGCAGTTTTAGGATATGGAGCAGTATATGGACACTTTTACATTTCATGTCAACTACACATAAAAAGAAGATTCATACAACAATCAAACTAATCTCAAAATCCAAatcaaaaacagtcaaatctttttaacttcttgtttaaaatacaaactTATTTTGTTTGCGGTGGATCTTTGGCTAGTCTTACACAGATTCAGTGCATAAGATCAACTTGgaatgtaatattgttaaaaaaagaaaaagaaaaagaaataaataaaacgtaacGCAAGGCAAAATAAATTGGATGCACATAAATCACATCACCCTCACTGTACTTAATGGAGTTGATCTTCCAAATATTTGCCCAACTTTTTGGCCACTGCTCgtaaactccttttccaaagCACATTATggatgtttttaattgatttttctAAACATACAAAGaaactaaatcattaaaataacgCGAATAGGTCCAAAACCCGCATGAGGAAACAATCAAAAAGACTGGAGAAAGTTGTTGACTCCTCTCTCGCACATACATGCATCCACCTCCTCCTATTTCACTGCCAGAGCTGCTGTCTTTCTTTGCTCTCTCCCTCCagagaaagaatgaaataaagcaaagCTCATTACCTCTTTCTTTCACAGCTCCTCCAGGCTCCGGCACTGCAACAACTGCCCCCGCAACACACAAACTTCAGACACGACATGCACATGcacctcacaaacacacaaacatacacatgcCACGGAGTCAAGAGCCTGTGAGGGCCTCGCAGCGGCATTTCTGAAAGCACTCGTGCTGAAAGCATTCAAGAAAATACA
>TU132723
aaaacatattttggatgcaaataatcGTTATGATATatagcaatgcatattttaaatgcataatatataatatacataatatattaatggtTTCATTTGCACTGAAGCAGTAAAAGTACGAGAACTGTGTCTGTAGCAGTTTTAGGATATGGAGCAGTATATGGACACTTTTACATTTCATGTCAACTACACATAAAAAGAAGATTCATACAACAATCAAACTAATCTCAAAATCCAAatcaaaaacagtcaaatctttttaacttcttgtttaaaatacaaactTATTTTGTTTGCGGTGGATCTTTGGCTAGTCTTACACAGATTCAGTGCATAAGATCAACTTGgaatgtaatattgttaaaaaaagaaaaagaaaaagaaataaataaaacgtaacGCAAGGCAAAATAAATTGGATGCACATAAATCACATCACCCTCACTGTACTTAATGGAGTTGATCTTCCAAATATTTGCCCAACTTTTTGGCCACTGCTCgtaaactccttttccaaagCACATTATggatgtttttaattgatttttctAAACATACAAAGaaactaaatcattaaaataacgCGAATAGGTCCAAAACCCGCATGAGGAAACAATCAAAAAGACTGGAGAAAGTTGTTGACTCCTCTCTCGCACATACATGCATCCACCTCCTCCTATTTCACTGCCAGAGCTGCTGTCTTTCTTTGCTCTCTCCCTCCagagaaagaatgaaataaagcaaagCTCATTACCTCTTTCTTTCACAGCTCCTCCAGGCTCCGGCACTGCAACAACTGCCCCCGCAACACACAAACTTCAGACACGACATGCACATGcacctcacaaacacacaaacatacacatgcCACGGAGTCAAGAGCCTGTGAGGGCCTCGCAGCGGCATTTCTGAAAGCACTCGTGCTGAAAGCATTCAAGAAAATACACTAAACCTAAGattaaaagcagaaattaaaggtgtgtttaaaaaaacagccaatacatttaaaataacgtgtgtgta

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU132721 False 946 lncRNA 0.36 1 687427 688372
TU132723 True 1023 lncRNA 0.36 1 687427 688449

Neighbor

gene id symbol gene type direction distance location
LOC122356634 kcnma1a,kcnma1,LOC107582501 coding upstream 9828 563819 ~ 677599 (+)
LOC122356635 LOC107698159,LOC107747466 coding upstream 146997 380963 ~ 540430 (+)
anxa11a anxa11a,LOC107721228,LOC107708439,LOC107698157,LOC107582500,LOC107589536,LOC107678500 coding upstream 367384 306723 ~ 320043 (+)
mocos mocos,LOC107698156,LOC107582499,LOC107678503,LOC107708374 coding upstream 382088 299033 ~ 305339 (+)
LOC122356894 LOC107698146,LOC107582494,LOC107721215,LOC107678583,LOC107708388 coding upstream 538050 147154 ~ 149377 (+)
LOC122357037 NA coding downstream 120086 808535 ~ 809420 (+)
znf503 znf503,LOC107747464,LOC107708443,LOC107582504,LOC107589531 coding downstream 242863 931312 ~ 937729 (+)
ifit8 LOC107747472,LOC107582559,LOC107690202,LOC107678487,LOC107577686,LOC107589567 coding downstream 323096 1011545 ~ 1014177 (+)
LOC122356862 LOC107747462,LOC107690182,LOC107582548 coding downstream 325863 1014312 ~ 1021027 (+)
tet1 LOC107582512,LOC107690175,LOC107747454,LOC107708452,LOC107589523 coding downstream 483407 1171856 ~ 1205536 (+)
G89669 NA non-coding upstream 3655 683478 ~ 683772 (+)
G89635 NA non-coding upstream 182521 499262 ~ 504906 (+)
G89630 NA non-coding upstream 307016 380112 ~ 380411 (+)
G89627 NA non-coding upstream 308598 377357 ~ 378829 (+)
G89527 NA non-coding upstream 462681 224514 ~ 224746 (+)
LOC122356899 NA non-coding downstream 272220 960669 ~ 965089 (+)
G89714 NA non-coding downstream 319413 1007862 ~ 1008216 (+)
G89718 NA non-coding downstream 333086 1021535 ~ 1021880 (+)
G89719 LOC108444242,LOC103386924,LOC107747461,LOC107690181 non-coding downstream 336124 1024573 ~ 1026667 (+)
G89721 NA non-coding downstream 338524 1026973 ~ 1029295 (+)
G89631 LOC107698159,LOC107747466 other upstream 9826 380964 ~ 677601 (+)
dlg5a dlg5a,LOC107708441,LOC107698145,LOC107678499 other upstream 310856 323731 ~ 376571 (+)
fignl1 fignl1,LOC107721231,LOC107698153,LOC107678605 other upstream 450534 190797 ~ 236893 (+)
klc1a klc1a,klc1,LOC107721224,LOC107698151,LOC107708436,LOC107678539 other upstream 503989 150439 ~ 183438 (+)
comtd1 comtd1,LOC107690183,LOC107582505,LOC107747463,LOC107678519 other downstream 319819 1008268 ~ 1011247 (+)
G89770 LOC107582509,LOC107690188,LOC107747458 other downstream 450710 1139159 ~ 1140195 (+)
selenou1a fam213aa,fam213a,LOC107690162,LOC107733773,LOC107582522 other downstream 653647 1342096 ~ 1345863 (+)
G89846 NA other downstream 780956 1469405 ~ 1470135 (+)
LOC122356486 march8,LOC107690179,LOC107582508,LOC107708446 other downstream 892909 1581358 ~ 1613330 (+)

Expression


Co-expression Network