G89754


Basic Information

Item Value
gene id G89754
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 1080132 ~ 1164388 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU132820
GCAAGACAGTATTATTTATGAGAATGTGTCTGACAAATcttttgcacattttctatTCAAGTGACTCATGTAGTTCCCATCACAAATCAGTGAAGATTCACATACATATCAGCTGTGATGTATTCATCAGCACACGAATTCTCATTTGATTGTTTTCTTCCAAACTGGAGATTGTGAATTAACCTGCATCAATCGGATAATAAACTGGAGCCACAGTAACATCGGCATGCGAACACGACTGAATACTGCATAGACATTTATGTACACTCTCTTTCACTAGTTATATTATTCAGGTGCAACTAAAAGAGACAAATATCAGTCAATAAGACTCGAGGTGACTCCGATTTGCTGAAATATAAAGTTACATATGAATTCATTTTAGCAAAGAAAAATCAACATAcatatttgacataaaaaaatgacgTCATGAGTCATAGTTAAAAGCACTGTGATATACCTACAGAAACTGTCCACATAGGTACAAACGACTGcgattttgtgttttgtttaaacgAGTGAAAAATTAAGGCATATTGTTCGAACTGAAATGGTATGGCTTCTTGCTGGCAAGTTTCAGATGCAGTTTCCATAGAATTTCCAGTGTCGGTTGTTTCTGATCTACACATAACGGAAAAGCAAGCTTTTGTTTCTGTATCCATAGTGATGGCTGCTGGGCTGTGCAGAGCCACAGGTTCTCCGTTTGTGTGGGTGTTTTGTAAGAACTGGATTTGAGATTTGAGATGACTGATCTCTGGAATGGCAGACAGGTCACCAGGGGTCATTTCAACTCATTTCTTTAAGGCTTAGCCACTGATTGCTCTAGTTTAGGTGAAGAACTTGCTTCATGAACTCGTAAGTGGTGAAGGCAACAGCTTGTGAGGGTATACAGCGGATGTAGTTGAGGGACAGGCCACGATACAGTCCTTTTTTGACACCATATTGAGAATATACATGCTTAAGAGTTTTTGTGAGGCTGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132820 True 978 lncRNA 0.39 2 1080132 1164388

Neighbor

gene id symbol gene type direction distance location
LOC122356862 LOC107747462,LOC107690182,LOC107582548 coding upstream 59105 1014312 ~ 1021027 (+)
ifit8 LOC107747472,LOC107582559,LOC107690202,LOC107678487,LOC107577686,LOC107589567 coding upstream 65955 1011545 ~ 1014177 (+)
znf503 znf503,LOC107747464,LOC107708443,LOC107582504,LOC107589531 coding upstream 142403 931312 ~ 937729 (+)
LOC122357037 NA coding upstream 270712 808535 ~ 809420 (+)
LOC122356634 kcnma1a,kcnma1,LOC107582501 coding upstream 402533 563819 ~ 677599 (+)
tet1 LOC107582512,LOC107690175,LOC107747454,LOC107708452,LOC107589523 coding downstream 7468 1171856 ~ 1205536 (+)
eif4e1c eif4e1c,LOC107582514,LOC107690176,LOC107708453,LOC107747456,LOC108444323 coding downstream 43855 1208243 ~ 1214044 (+)
zgc:110319 zgc:110319,LOC107690174,LOC107582515,LOC107747453,LOC107708456,LOC107678512,LOC107589524 coding downstream 56767 1221155 ~ 1224114 (+)
ccar1 ccar1,LOC107747452,LOC107690173,LOC107708455,LOC107582549 coding downstream 60452 1224840 ~ 1245971 (+)
stox1 stox1,LOC107747447,LOC107690171,LOC107678608,LOC107708457,LOC107576485 coding downstream 89136 1253524 ~ 1268058 (+)
G89721 NA non-coding upstream 50837 1026973 ~ 1029295 (+)
G89719 LOC108444242,LOC103386924,LOC107747461,LOC107690181 non-coding upstream 53465 1024573 ~ 1026667 (+)
G89718 NA non-coding upstream 58252 1021535 ~ 1021880 (+)
G89714 NA non-coding upstream 71916 1007862 ~ 1008216 (+)
LOC122356899 NA non-coding upstream 115043 960669 ~ 965089 (+)
LOC122356494 NA non-coding downstream 134197 1298585 ~ 1299232 (+)
G89821 mat1a,LOC107582520,LOC107570529,LOC107733750,LOC107678534,LOC107708460 non-coding downstream 167450 1331838 ~ 1335134 (+)
G89842 NA non-coding downstream 281804 1446192 ~ 1447605 (+)
G89843 NA non-coding downstream 284658 1449046 ~ 1449943 (+)
G89844 sema4ga,LOC107733683,LOC107708465,LOC107678493,LOC107690158,LOC107582524 non-coding downstream 285977 1450365 ~ 1450830 (+)
comtd1 comtd1,LOC107690183,LOC107582505,LOC107747463,LOC107678519 other upstream 68885 1008268 ~ 1011247 (+)
G89631 LOC107698159,LOC107747466 other upstream 402531 380964 ~ 677601 (+)
dlg5a dlg5a,LOC107708441,LOC107698145,LOC107678499 other upstream 703561 323731 ~ 376571 (+)
fignl1 fignl1,LOC107721231,LOC107698153,LOC107678605 other upstream 843239 190797 ~ 236893 (+)
klc1a klc1a,klc1,LOC107721224,LOC107698151,LOC107708436,LOC107678539 other upstream 896694 150439 ~ 183438 (+)
selenou1a fam213aa,fam213a,LOC107690162,LOC107733773,LOC107582522 other downstream 177708 1342096 ~ 1345863 (+)
G89846 NA other downstream 305017 1469405 ~ 1470135 (+)
LOC122356486 march8,LOC107690179,LOC107582508,LOC107708446 other downstream 416970 1581358 ~ 1613330 (+)
mpc1 mpc1,LOC107693783,LOC107725004,LOC107565920,LOC107709408,LOC107571070 other downstream 675947 1840335 ~ 1842108 (+)
G90010 LOC107676803 other downstream 707796 1872184 ~ 1872591 (+)

Expression


Co-expression Network