G89770 (LOC107582509,LOC107690188,LOC107747458)


Basic Information

Item Value
gene id G89770
gene name LOC107582509,LOC107690188,LOC107747458
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 1139159 ~ 1140195 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU132855
ggacaactttaaaggtaatttctcagtattttaattgtttcagttttaaatagcTCCATCTCAGCCGAATACTGTCCCATCCTAACAAACCCTACATCAATCGGGATgaaatttacagttttatacaTCAGGCCCATGGTAAGAATCACAGTGCAGAGTGTTTTGCAGTGATAACTAACCCATGTCATCGTCGAATATAGATTTTGTCTCCAATTTCTTCTTTGCTTTCTTCTCCTTTGGCTTTGTGGTGCCAGTCAAGTCAGcaaaaatatcaacatcatcatcaaaCAAACTTGCATCCAACAACACTTCCTTGGGCTTCTTCTGGGCCTTGGGAGGATCTTTCGGTTCATCCTGCAAACATTTTACGgtCTGGAAAAAGTCCGGTTTTGCAGAGCTGGCTTCTGCTTTGAAGTTTTTACTATCTGCACTTTTACTCTTTCCTGCTCCaaaaatatcatcatcatcatcatcatcttctaGGAAGGAAATTTGTTTGCCTTTCTGGACAGGCTTCTGTTTGACTGTAGCAAAAAGATCATCCTCGTGGCTGTCAAAAATAGAAGAGGCCTGGTCTTTCTTTGAAGCTATGACGGTTTCTGTCTTGGAGGCTTTCTTATGGCCTTCCTCGGGGGtctttgctttgtgttttgaGGAGGAAACGGGCTTTGTGCCAAAGAGATCATCTGAATCAAACAGATCATCTCCAGAATCGAGAAATCTCTTCGGCCTGACTGCTTCGTCGGGGCTCTTGGCAGGAGCAGGGGTGCTAACGGGTAAAGTGAGCGCTGAAGGTCGCACTGAAACTGGGTTAAAGGTAGGAAGAGAAGCGGCCATAACTGGCTCATCAGCTTGTACAGAGCTGCTTTCTCCAACAGCCTGCTCCGACTGCTGCGCTGCAAGATGTCTAGCTGTTCTTGTCTGTGGTCGCCGTCGCCCTGCGCCTTTAGCCCGAC

Function

NR:

description
PREDICTED: WASH complex subunit FAM21-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132855 True 956 TUCP 0.45 2 1139159 1140195

Neighbor

gene id symbol gene type direction distance location
LOC122356862 LOC107747462,LOC107690182,LOC107582548 coding upstream 118132 1014312 ~ 1021027 (+)
ifit8 LOC107747472,LOC107582559,LOC107690202,LOC107678487,LOC107577686,LOC107589567 coding upstream 124982 1011545 ~ 1014177 (+)
znf503 znf503,LOC107747464,LOC107708443,LOC107582504,LOC107589531 coding upstream 201430 931312 ~ 937729 (+)
LOC122357037 NA coding upstream 329739 808535 ~ 809420 (+)
LOC122356634 kcnma1a,kcnma1,LOC107582501 coding upstream 461560 563819 ~ 677599 (+)
tet1 LOC107582512,LOC107690175,LOC107747454,LOC107708452,LOC107589523 coding downstream 31661 1171856 ~ 1205536 (+)
eif4e1c eif4e1c,LOC107582514,LOC107690176,LOC107708453,LOC107747456,LOC108444323 coding downstream 68048 1208243 ~ 1214044 (+)
zgc:110319 zgc:110319,LOC107690174,LOC107582515,LOC107747453,LOC107708456,LOC107678512,LOC107589524 coding downstream 80960 1221155 ~ 1224114 (+)
ccar1 ccar1,LOC107747452,LOC107690173,LOC107708455,LOC107582549 coding downstream 84645 1224840 ~ 1245971 (+)
stox1 stox1,LOC107747447,LOC107690171,LOC107678608,LOC107708457,LOC107576485 coding downstream 113329 1253524 ~ 1268058 (+)
G89721 NA non-coding upstream 109864 1026973 ~ 1029295 (+)
G89719 LOC108444242,LOC103386924,LOC107747461,LOC107690181 non-coding upstream 112492 1024573 ~ 1026667 (+)
G89718 NA non-coding upstream 117279 1021535 ~ 1021880 (+)
G89714 NA non-coding upstream 130943 1007862 ~ 1008216 (+)
LOC122356899 NA non-coding upstream 174070 960669 ~ 965089 (+)
G89775 NA non-coding downstream 8076 1148271 ~ 1149103 (+)
LOC122356494 NA non-coding downstream 158390 1298585 ~ 1299232 (+)
G89821 mat1a,LOC107582520,LOC107570529,LOC107733750,LOC107678534,LOC107708460 non-coding downstream 191643 1331838 ~ 1335134 (+)
G89842 NA non-coding downstream 305997 1446192 ~ 1447605 (+)
G89843 NA non-coding downstream 308851 1449046 ~ 1449943 (+)
comtd1 comtd1,LOC107690183,LOC107582505,LOC107747463,LOC107678519 other upstream 127912 1008268 ~ 1011247 (+)
G89631 LOC107698159,LOC107747466 other upstream 461558 380964 ~ 677601 (+)
dlg5a dlg5a,LOC107708441,LOC107698145,LOC107678499 other upstream 762588 323731 ~ 376571 (+)
fignl1 fignl1,LOC107721231,LOC107698153,LOC107678605 other upstream 902266 190797 ~ 236893 (+)
klc1a klc1a,klc1,LOC107721224,LOC107698151,LOC107708436,LOC107678539 other upstream 955721 150439 ~ 183438 (+)
selenou1a fam213aa,fam213a,LOC107690162,LOC107733773,LOC107582522 other downstream 201901 1342096 ~ 1345863 (+)
G89846 NA other downstream 329210 1469405 ~ 1470135 (+)
LOC122356486 march8,LOC107690179,LOC107582508,LOC107708446 other downstream 441163 1581358 ~ 1613330 (+)
mpc1 mpc1,LOC107693783,LOC107725004,LOC107565920,LOC107709408,LOC107571070 other downstream 700140 1840335 ~ 1842108 (+)
G90010 LOC107676803 other downstream 731989 1872184 ~ 1872591 (+)

Expression


Co-expression Network