G89775


Basic Information

Item Value
gene id G89775
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 1148271 ~ 1149103 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU132864
ACAGACCCCAAACCTTCGAACGCTAGCGTGCATTTGGCAGCGTGATGTGATAAGCACATGCTGAATGAAGTGAACTCACGGTCGCTCGTACCCTGAGGTTTTgactctttctttgttttactcTTCTTCTGGGTGATGGATGGGCCGGATGACAATGCTTGAGAACAAACAAGTTCATGCACACAGGTAAACTCAAGACAGAAAATCAACTGAATGGAAAGATGAAAACGTGTTAAAGAAGTAAAACAATCAAACTTGTAAGTAGTTCGTGACCGTACATGTGCGATCTGCTTCAGGCTTATTCGGAGTCTCTCCCTTGATTCTGGCCGCTAGTTCATCAGCAAAGGATGGCAGACCAGTGTCCTGAAAGACCTTTTTGAGTTCATCTTCATCCTTATCAGACCCTCCAAATATGTCTgaatcttcatcttcatcagcaTCATCGTAACTAGCAACAGATGGCTTCTGTGGGTTGAACGAGTGAACGTTTCAGAATTACATCTATATATGGTGCActcaatgcaaaacaaatattttgtaaaatgtaaaaatgtatatattatatgcgTCTAAATAAGGCTTTATCAAATGTGTAATTCATTACATTAccaattacatttctaaaataaatgtaaaaaaaaaatgacacttttaataaaacaaaaatatatgtaaacatttgacATCTATATCTATAATGTGCTAATTAGAAATGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU132864 True 718 lncRNA 0.37 2 1148271 1149103

Neighbor

gene id symbol gene type direction distance location
LOC122356862 LOC107747462,LOC107690182,LOC107582548 coding upstream 127244 1014312 ~ 1021027 (+)
ifit8 LOC107747472,LOC107582559,LOC107690202,LOC107678487,LOC107577686,LOC107589567 coding upstream 134094 1011545 ~ 1014177 (+)
znf503 znf503,LOC107747464,LOC107708443,LOC107582504,LOC107589531 coding upstream 210542 931312 ~ 937729 (+)
LOC122357037 NA coding upstream 338851 808535 ~ 809420 (+)
LOC122356634 kcnma1a,kcnma1,LOC107582501 coding upstream 470672 563819 ~ 677599 (+)
tet1 LOC107582512,LOC107690175,LOC107747454,LOC107708452,LOC107589523 coding downstream 22753 1171856 ~ 1205536 (+)
eif4e1c eif4e1c,LOC107582514,LOC107690176,LOC107708453,LOC107747456,LOC108444323 coding downstream 59140 1208243 ~ 1214044 (+)
zgc:110319 zgc:110319,LOC107690174,LOC107582515,LOC107747453,LOC107708456,LOC107678512,LOC107589524 coding downstream 72052 1221155 ~ 1224114 (+)
ccar1 ccar1,LOC107747452,LOC107690173,LOC107708455,LOC107582549 coding downstream 75737 1224840 ~ 1245971 (+)
stox1 stox1,LOC107747447,LOC107690171,LOC107678608,LOC107708457,LOC107576485 coding downstream 104421 1253524 ~ 1268058 (+)
G89764 NA non-coding upstream 1411 1129089 ~ 1146860 (+)
G89721 NA non-coding upstream 118976 1026973 ~ 1029295 (+)
G89719 LOC108444242,LOC103386924,LOC107747461,LOC107690181 non-coding upstream 121604 1024573 ~ 1026667 (+)
G89718 NA non-coding upstream 126391 1021535 ~ 1021880 (+)
G89714 NA non-coding upstream 140055 1007862 ~ 1008216 (+)
LOC122356494 NA non-coding downstream 149482 1298585 ~ 1299232 (+)
G89821 mat1a,LOC107582520,LOC107570529,LOC107733750,LOC107678534,LOC107708460 non-coding downstream 182735 1331838 ~ 1335134 (+)
G89842 NA non-coding downstream 297089 1446192 ~ 1447605 (+)
G89843 NA non-coding downstream 299943 1449046 ~ 1449943 (+)
G89844 sema4ga,LOC107733683,LOC107708465,LOC107678493,LOC107690158,LOC107582524 non-coding downstream 301262 1450365 ~ 1450830 (+)
G89770 LOC107582509,LOC107690188,LOC107747458 other upstream 8076 1139159 ~ 1140195 (+)
comtd1 comtd1,LOC107690183,LOC107582505,LOC107747463,LOC107678519 other upstream 137024 1008268 ~ 1011247 (+)
G89631 LOC107698159,LOC107747466 other upstream 470670 380964 ~ 677601 (+)
dlg5a dlg5a,LOC107708441,LOC107698145,LOC107678499 other upstream 771700 323731 ~ 376571 (+)
fignl1 fignl1,LOC107721231,LOC107698153,LOC107678605 other upstream 911378 190797 ~ 236893 (+)
selenou1a fam213aa,fam213a,LOC107690162,LOC107733773,LOC107582522 other downstream 192993 1342096 ~ 1345863 (+)
G89846 NA other downstream 320302 1469405 ~ 1470135 (+)
LOC122356486 march8,LOC107690179,LOC107582508,LOC107708446 other downstream 432255 1581358 ~ 1613330 (+)
mpc1 mpc1,LOC107693783,LOC107725004,LOC107565920,LOC107709408,LOC107571070 other downstream 691232 1840335 ~ 1842108 (+)
G90010 LOC107676803 other downstream 723081 1872184 ~ 1872591 (+)

Expression


Co-expression Network