mpc1 (mpc1,LOC107693783,LOC107725004,LOC107565920,LOC107709408,LOC107571070)


Basic Information

Item Value
gene id mpc1
gene name mpc1,LOC107693783,LOC107725004,LOC107565920,LOC107709408,LOC107571070
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 1840335 ~ 1842108 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU133243
GCGGCGGCAGCGCAGCGCGCGTGCGTGACTCTGTCCTCTAGTTGACGTCGCGTAGCTGCAGCAGCGAGTCGTGTTTACTGTTAACTTCGCGCCAGCTCACTTCTCTTCGTCGTTGTGTCATCTCCTGACGGACCATGGCCGGGACCCTGGCGCGCAAAGCCGTGGATCATCTCCGCAGCAAAGAGTTCAGAGATTACCTCATGAGGTGACATTTCTGGGGTCCGGTGGCGAACTGGGGCCTGCCCATCGCCGCCATCAGTGACATGAAGAAGAGTCCAGAGATCATCAGCGGCAGAATGACCTTCGCTCTCACCTGCTACTCGCTGCTCTTCATGCGCTTCGCCTACAAGGTCCAGCCCAGAAACTGGCTTCTGTTCGCCTGCCACTTCACCAACGAAGCCGCTCAGCTCGTCCAGGGCAGCAGACTCATCAAATACAACATGGAGAAGAAGATGGCCAAATAACGGATTACGTGCTCAGACGTCACGGTCATGTTTAGTACTGCAACATCTCATCTGttttaacacaataaataatcattCGGAAACTTAGGTGATTGGTTTTATGCTGTTTTCTCTCTGttacacatttaacattttaagccTTATGACACCGCTTGGAAGGTTATggtttttatgtaatgtagaaatatttgattaatttatttccgTGCTTAATGCGATCAGTAGTTATGTTGGTGAAtatggagaaaataaaacatgtaataatgcttttgctttttatgactatatctgtctgtatatctctctctgtctatctgttcTTCGCACAAAGCTATCAGAGACCTTCAGAAGACGTTACGTCACATTCCTCTGGTTGTCATAATGGAGATAATTCAATTCATGCAGAAAATGGCCAGACATTGTAAAATGGTGTTCTGTGGAGTAAAGGCATAGGGCTGAAAGAATAAACAACGTCCAGTAAACTAAAACTGt
>TU133244
GCGGCGGCAGCGCAGCGCGCGTGCGTGACTCTGTCCTCTAGTTGACGTCGCGTAGCTGCAGCAGCGAGTCGTGTTTACTGTTAACTTCGCGCCAGCTCACTTCTCTTCGTCGTTGTGTCATCTCCTGACGGACCATGGCCGGGACCCTGGCGCGCAAAGCCGTGGATCATCTCCGCAGCAAAGAGTTCAGAGATTACCTCATGAGGTGACATTTCTGGGGTCCGGTGGCGAACTGGGGCCTGCCCATCGCCGCCATCAGTGACATGAAGAAGAGTCCAGAGATCATCAGCGGCAGAATGACCTTCGCTCTCACCTGCTACTCGCTGCTCTTCATGCGCTTCGCCTACAAGGTCCAGCCCAGAAACTGGCTTCTGTTCGCCTGCCACTTCACCAACGAAGCCGCTCAGCTCGTCCAGGGCAGCAGACTCATCAAATACAACATGGAGAAGAAGATGGCCAAATAACGGATTACGTGCTCAGACGTCACGGTCATGTTTAGTACTGCAACATCTCATCTGttttaacacaataaataatcattCGGAAACTTAGCTATCAGAGACCTTCAGAAGACGTTACGTCACATTCCTCTGGTTGTCATAATGGAGATAATTCAATTCATGCAGAAAATGGCCAGACATTGTAAAATGGTGTTCTGTGGAGTAAAGGCATAGGGCTGAAAGAATAAACAACGTCCAGTAAACTAAAACTGt
>XM_043255224.1
CGGCGGCAGCGCAGCGCGCGTGCGTGACTCTGTCCTCTAGTTGACGTCGCGTAGCTGCAGCAGCGAGTCGTGTTTACTGTTAACTTCGCGCCAGCTCACTTCTCTTCGTCGTTGTGTCATCTCCTGACGGACCATGGCCGGGACCCTGGCGCGCAAAGCCGTGGATCATCTCCGCAGCAAAGAGTTCAGAGATTACCTCATGAGCACACATTTCTGGGGTCCGGTGGCGAACTGGGGCCTGCCCATCGCCGCCATCAGTGACATGAAGAAGAGTCCAGAGATCATCAGCGGCAGAATGACCTTCGCTCTCACCTGCTACTCGCTGCTCTTCATGCGCTTCGCCTACAAGGTCCAGCCCAGAAACTGGCTTCTGTTCGCCTGCCACTTCACCAACGAAGCCGCTCAGCTCGTCCAGGGCAGCAGACTCATCAAATACAACATGGAGAAGAAGATGGCCAAATAACGGATTACGTGCTCAGACGTCACGGTCATGTTTAGTACTGCAACATCTCATCTGttttaacacaataaataatcattCGGAAACTTAGGTGATTGGTTTTATGCTGTTTTCTCTCTGttacacatttaacattttaagccTTATGACACCGCTTGGAAGGTTATggtttttatgtaatgtagaaatatttgattaatttatttccgTGCTTAATGCGATCAGTAGTTATGTTGGTGAAtatggagaaaataaaacatgtaataatg

Function

symbol description
mpc1 Predicted to enable pyruvate transmembrane transporter activity. Involved in pyruvate metabolic process. Acts upstream of or within digestive tract development. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be integral component of mitochondrial inner membrane. Is expressed in several structures, including digestive system; female organism; head; pectoral fin; and vasculature. Human ortholog(s) of this gene implicated in mitochondrial pyruvate carrier deficiency. Orthologous to human MPC1 (mitochondrial pyruvate carrier 1).

NR:

description
PREDICTED: mitochondrial pyruvate carrier 1

GO:

id name namespace
GO:0006850 mitochondrial pyruvate transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133243 True 956 lncRNA 0.46 4 1840335 1842108
TU133244 False 713 TUCP 0.51 5 1840335 1842108
XM_043255224.1 False 729 mRNA 0.48 5 1840336 1841882

Neighbor

gene id symbol gene type direction distance location
foxg1d foxg1,LOC107709474,LOC107680282,LOC107565904,LOC108443822 coding upstream 22243 1815818 ~ 1818092 (+)
LOC122356760 pim3,LOC107732271 coding upstream 70109 1768733 ~ 1770226 (+)
prorsd1 LOC107701441,LOC107571560 coding upstream 155156 1683250 ~ 1685179 (+)
pdzd7a pdzd7a,pdzd7,LOC107690160,LOC107570534,LOC107678494 coding upstream 462382 1357268 ~ 1377953 (+)
zgc:154058 zgc:154058,LOC107733751,LOC107582519,LOC107690163,LOC107570530,LOC107708463,LOC103041715,LOC108441772,LOC108263524 coding upstream 512550 1299234 ~ 1327785 (+)
irf1a LOC107571076,LOC107725011,LOC107680285,LOC107565919 coding downstream 18823 1860931 ~ 1864358 (+)
fbxo28 fbxo28,LOC107753723,LOC107742812,LOC107701582,LOC107558225 coding downstream 197374 2039482 ~ 2046270 (+)
degs1 degs1,LOC107753721,LOC107699139,LOC107742811,LOC108412154 coding downstream 212881 2054989 ~ 2059566 (+)
wu:fc17b08 LOC107705013,LOC107565911,LOC107699137,LOC107742810,LOC107753730,LOC107753729 coding downstream 234065 2076173 ~ 2094028 (+)
LOC122356476 LOC107582116,LOC107753727,LOC107699114,LOC101886535,LOC107558210,LOC107709369 coding downstream 324512 2166620 ~ 2175433 (+)
G89997 NA non-coding upstream 676 1837979 ~ 1839659 (+)
G89957 NA non-coding upstream 112184 1701578 ~ 1728151 (+)
G89981 ccdc88a,LOC107570323 non-coding upstream 124451 1711945 ~ 1715884 (+)
G89974 NA non-coding upstream 147214 1692435 ~ 1693121 (+)
G89973 ccdc88a,LOC107570323,LOC107695193 non-coding upstream 147924 1690146 ~ 1692411 (+)
LOC122356489 NA non-coding downstream 19363 1861471 ~ 1862276 (+)
G90006 NA non-coding downstream 24039 1866147 ~ 1869613 (+)
G90009 NA non-coding downstream 29582 1871690 ~ 1871892 (+)
G90011 NA non-coding downstream 31107 1873215 ~ 1873444 (+)
G90013 NA non-coding downstream 32593 1874701 ~ 1877196 (+)
LOC122356486 march8,LOC107690179,LOC107582508,LOC107708446 other upstream 227005 1581358 ~ 1613330 (+)
G89846 NA other upstream 370200 1469405 ~ 1470135 (+)
selenou1a fam213aa,fam213a,LOC107690162,LOC107733773,LOC107582522 other upstream 494472 1342096 ~ 1345863 (+)
G89770 LOC107582509,LOC107690188,LOC107747458 other upstream 700140 1139159 ~ 1140195 (+)
comtd1 comtd1,LOC107690183,LOC107582505,LOC107747463,LOC107678519 other upstream 829088 1008268 ~ 1011247 (+)
G90010 LOC107676803 other downstream 30076 1872184 ~ 1872591 (+)
lgi1a lgi1a,lgi3,LOC107565913,LOC107701579,LOC107753733,LOC108260544 other downstream 147764 1989872 ~ 1997310 (+)
tp53bp2a tp53bp2,LOC107582030,LOC107705014,LOC107558217,LOC107742808 other downstream 311314 2153422 ~ 2166028 (+)
cutc cutc other downstream 333901 2176009 ~ 2180829 (+)
LOC122356772 pim3,LOC107732271 other downstream 422638 2264746 ~ 2284807 (+)

Expression


Co-expression Network