LOC122356772 (pim3,LOC107732271)


Basic Information

Item Value
gene id LOC122356772
gene name pim3,LOC107732271
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2264746 ~ 2284807 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU133438
GTGACGTCAAACTGGAGAACCTACTGATCAACATCGAGACATCCGAAGTCAAGCTGATTGACTTCGGATGCGAAGATTTCTGGGGACTTCACCCTACAAGTCCTACCACGGCACAGCAAAGTACTCCCCTCCAGAGTACCACCGCAGGGGAGAGTACCACGGCTGGCCAGCGACGGTCTGGTCACTAGGGGTCGTGATGTTCGCACTGTTGTGTGGACACTTCCCTAGCGACCATGACCTGTTGCTGCTGCAGAAGAAGCGCTGGTCCAAACCTGGCCTGTCAAAAG
>XM_043255825.1
ATGGGACAGCGAAACACCAAAGTGAGTCCGATGACTGTTGGAGAGGTGTACGATCAACATCTTAGTACACCCCCAAAACCCAGCACCAACACGGAGGTTCAACATCCCCCTCCCCGCGATGAGACCCCTGTTGACTACATCTTCAGCCGCTACGCCATTGGTGATCAGCTGGGGAAAGGCGGTTTTGGCGTGGTGTATGAAGGGAGACGTTTGGATGACGATCTTAAAGTGGCTGTGAAATATGTCACAAAGACTCAGCACATGGAGTGTATTATCATCCCCGATCATCCAAACCCTCTTCCGAAAGAGATCGCCCTCACCATCCTGGCCAACAAAGGTCACAGAGTGCCGGAGATAATCAGGCTGCTGGACTGGACGGACCACCCTGACCACTTCGTCCTGGTCCTGGAATGTCCCTCTCCCTGCGAGAACCTGGTAGAGTTCATGAGGCGTCATGGTGGAAGAATCGATGAAGAAACGACGCGCCAGATCATGTGGCAGGCGACTTACGCTGCACACAAGTGCTGCCTCCGCAGAGTCTTCCACCGTGACGTCAAACTGGAGAACCTACTGATCAACATCGAGACATCCGAAGTCAAGCTGATTGACTTCGGATGCGGGGACATTCTGGGGACTTCACCCTACAAGTCCTACCACGGCACAGCAAAGTACTCCCCTCCAGAGTACCACCGCAGGGGAGAGTACCACGGCTGGCCAGCGACGGTCTGGTCACTAGGGGTCGTGATGTTCGCACTGTTGTGTGGACACTTCCCTAGCGACCATGACCTGTTGCTGCTGCAGAAGAAGCGCTGGTCCAAACCTGGCCTGTCAAAAGAATGCTGTGACCTCCTCGGGGCTCTCCTCCAAGAAAAGCCCATCCGGAGACTTGGTTTGGGGCAAATCGTGTTCCACAGCTGGTTTATGgcCCTCTTGTAGGACCGCTCCAGTTGGTGCTCTTCATCCCTCCTCTCGCCTTTGCGTCTTGCGGGGCGAGCAGGCCTCGTGTAGCGTCTTGCGCCCCGGCTTGAGGAAGCAGTATTTGCGTCTGGCGGTACTGCTTCCGGAGGGATgtgtacat

Function

symbol description
pim3 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Orthologous to human PIM3 (Pim-3 proto-oncogene, serine/threonine kinase).

NR:

description
PREDICTED: serine/threonine-protein kinase pim-3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133438 False 287 lncRNA 0.55 2 2264746 2284358
XM_043255825.1 True 1078 mRNA 0.55 7 2282762 2284807

Neighbor

gene id symbol gene type direction distance location
LOC122356461 cox15,LOC107753717,LOC107582029,LOC108437854,LOC108260879,LOC102219127 coding upstream 40293 2217871 ~ 2224453 (+)
abcc2 abcc2,LOC107758572,LOC107582114,LOC107654078,LOC107558209 coding upstream 47726 2199984 ~ 2217020 (+)
LOC122356458 NA coding upstream 69559 2186258 ~ 2195187 (+)
LOC122356476 LOC107582116,LOC107753727,LOC107699114,LOC101886535,LOC107558210,LOC107709369 coding upstream 89313 2166620 ~ 2175433 (+)
wu:fc17b08 LOC107705013,LOC107565911,LOC107699137,LOC107742810,LOC107753730,LOC107753729 coding upstream 170718 2076173 ~ 2094028 (+)
nrxn1b LOC107654084,LOC107582113,LOC107699145,LOC107758571,LOC107558206,LOC107738897 coding downstream 29699 2314506 ~ 2424731 (+)
LOC122356459 LOC107715620,LOC107654086,LOC107727476,LOC107571253 coding downstream 143953 2428760 ~ 2432683 (+)
LOC122356456 LOC107710218 coding downstream 161243 2446050 ~ 2450413 (+)
tmem14a zgc:163080,LOC107751370,LOC107701972,LOC107579763,LOC107597714 coding downstream 192786 2477593 ~ 2478849 (+)
polh polh coding downstream 197395 2482202 ~ 2488135 (+)
LOC122356498 pim3,LOC107732271 non-coding upstream 24699 2238942 ~ 2240047 (+)
G90094 NA non-coding upstream 188918 2075552 ~ 2075828 (+)
G90089 NA non-coding upstream 210900 2053597 ~ 2053846 (+)
G90088 NA non-coding upstream 212441 2052035 ~ 2052305 (+)
G90041 heatr5b non-coding upstream 228909 2035337 ~ 2035837 (+)
G90206 NA non-coding downstream 718 2285525 ~ 2286244 (+)
LOC122356495 NA non-coding downstream 18678 2303485 ~ 2304076 (+)
LOC122356488 NA non-coding downstream 25074 2309881 ~ 2311135 (+)
G90214 NA non-coding downstream 37802 2322609 ~ 2322964 (+)
G90220 NA non-coding downstream 152299 2437106 ~ 2437509 (+)
cutc cutc other upstream 83917 2176009 ~ 2180829 (+)
tp53bp2a tp53bp2,LOC107582030,LOC107705014,LOC107558217,LOC107742808 other upstream 98718 2153422 ~ 2166028 (+)
lgi1a lgi1a,lgi3,LOC107565913,LOC107701579,LOC107753733,LOC108260544 other upstream 267436 1989872 ~ 1997310 (+)
G90010 LOC107676803 other upstream 392155 1872184 ~ 1872591 (+)
mpc1 mpc1,LOC107693783,LOC107725004,LOC107565920,LOC107709408,LOC107571070 other upstream 422638 1840335 ~ 1842108 (+)
G90230 NA other downstream 185138 2469945 ~ 2470381 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other downstream 697752 2982559 ~ 3010641 (+)
LOC122356070 dnph1 other downstream 767175 3051982 ~ 3278260 (+)
G90350 dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069 other downstream 889928 3174735 ~ 3285406 (+)
G90349 NA other downstream 894620 3179427 ~ 3179933 (+)

Expression


Co-expression Network