G90161 (tp53bp2,LOC107582030,LOC107705014,LOC107742808)


Basic Information

Item Value
gene id G90161
gene name tp53bp2,LOC107582030,LOC107705014,LOC107742808
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2151837 ~ 2245078 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU133469
ggaggagctcggaGAAGCTGtcaggaggaggtggaggaggagggcTGTCGGGCTGAGGAGGTGGAGGTGAGAGCGGAGCGAGGGGCTGCGGGGCCGGGTGTGGAGGAGGCGGAGGAAGCATGTCCTCTGCTTGGATCTCAGGGGCCGCTGCGGGCTCCGGCGGCTCAGGAACTGCCTGCTCCGCTCTCTCCAGAGCTGCTTCATCTGCTCTCGGAGGATCTGCTGGCGGCTCCTTCTCCTCTTCTCCTGGAGGAGTCACCGCTGTCTCCATCGCGGCCAGGGTCGTCTTCTGGTACAGCAGCTTCTGGATGTTGGGGCCGCCCGGGCCCTCGGGCTCCGTGATGGAGCTGCGTTTCTTCAGGGGTCTGGGGGCATTGTAGAGCTTCTTCCTGAGGGCCTCGAGGTCGACGTCGCTCTGGTGCCGGTAGGGGTTGGAGATAAAGGGAAGCAGTTTGGTGGGACTCAGAGGTCTGGGGATGCGCTCACTCTCGGAGGTTCCAGTGCTGGGGTCCTTCTCTGCTTCGGGGCCACTGGATGAGTCCAGGTACGGGATCACGGGGT

Function

symbol description
tp53bp2 Enables NF-kappaB binding activity; identical protein binding activity; and p53 binding activity. Involved in intrinsic apoptotic signaling pathway by p53 class mediator and positive regulation of execution phase of apoptosis. Located in cell junction; cytosol; and nucleus. Colocalizes with perinuclear region of cytoplasm.

NR:

description
PREDICTED: apoptosis-stimulating of p53 protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133469 True 561 TUCP 0.65 3 2151837 2245078

Neighbor

gene id symbol gene type direction distance location
slit1a slit1,slit1a,LOC107699140,LOC107753728,LOC107705008,LOC107565895 coding downstream 5241 2093475 ~ 2146596 (-)
nvl nvl,LOC107558213 coding downstream 77059 2060300 ~ 2074778 (-)
heatr5b heatr5b,LOC102314180 coding downstream 114726 2012695 ~ 2037111 (-)
efemp1 efemp1,LOC107753722,LOC107742815,LOC107701580 coding downstream 140443 1997355 ~ 2011394 (-)
vit LOC107680287,LOC107565916,LOC107709440 coding downstream 231212 1899037 ~ 1920625 (-)
LOC122356487 LOC107654083,LOC107715618,LOC107727478 coding upstream 194128 2439206 ~ 2457063 (-)
LOC122356433 LOC107680168,LOC107571251,LOC107567524,LOC107563091,LOC107676802,LOC107653882,LOC107756192,LOC107560357,LOC107717306 coding upstream 213802 2458880 ~ 2466266 (-)
gsta.1 LOC107701971,LOC107734005 coding upstream 233505 2478583 ~ 2480329 (-)
LOC122356775 gtpbp2,LOC107751133,LOC107701968,LOC107699157 coding upstream 243349 2488427 ~ 2497421 (-)
LOC122356217 LOC107719934,LOC107699158,LOC107597732 coding upstream 362002 2607080 ~ 2608868 (-)
LOC122356492 NA non-coding downstream 96946 2052031 ~ 2054891 (-)
G90150 NA non-coding downstream 97877 2053757 ~ 2053960 (-)
G90078 NA non-coding downstream 244299 1907316 ~ 1907538 (-)
G90076 NA non-coding downstream 264228 1887406 ~ 1887609 (-)
G90074 NA non-coding downstream 280105 1871381 ~ 1871732 (-)
LOC122356500 NA non-coding upstream 20800 2265878 ~ 2280146 (-)
G90207 NA non-coding upstream 40464 2285542 ~ 2286209 (-)
G90208 NA non-coding upstream 42305 2287383 ~ 2298224 (-)
G90211 NA non-coding upstream 59136 2304214 ~ 2311129 (-)
G90261 NA non-coding upstream 182383 2427461 ~ 2427901 (-)
LOC122356758 ccdc88a,LOC107571560,LOC107701441,LOC107570323,LOC107695193 other downstream 459483 1684449 ~ 1692354 (-)
LOC122356439 LOC107747448,LOC107690165,LOC107678593,LOC107582517,LOC107576986,LOC107708380 other downstream 594790 1554230 ~ 1557047 (-)
si:dkey-228d14.5 si:dkey-228d14.5,LOC107747455,LOC107582513,LOC107708394,LOC107589525,LOC107678589,LOC107690177 other downstream 863555 1212870 ~ 1288282 (-)
lrmda c13h10orf11,cunh10orf11,c3h10orf11,cssa18h10orf11,LOC107747465,LOC107678567,LOC107708444,LOC105909757,LOC103041229,LOC107582503 other downstream 1220832 687409 ~ 931005 (-)
LOC122356753 LOC107708390,LOC107678530,LOC107589588,LOC107698143 other downstream 1912478 223958 ~ 239359 (-)
G90304 NA other upstream 339118 2584196 ~ 2585331 (-)
G90311 polh other upstream 381250 2626328 ~ 2627157 (-)
G90445 znf318,LOC107739464,LOC107655625,LOC107728066,LOC107559766 other upstream 745340 2990418 ~ 3244896 (-)
dlk2 dlk2,LOC107669558,LOC107696386,LOC107559779,LOC107728069 other upstream 1036259 3281337 ~ 3298549 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other upstream 1177675 3422753 ~ 3435580 (-)

Expression


Co-expression Network