G90261


Basic Information

Item Value
gene id G90261
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2427461 ~ 2427901 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU133608
AAGCAAACTGCCCAAACGGCAATAAATAAAGATGCTAGGACAAGATCCAGACACCTCTTAGAGAGCAAAAAGAAGATTTGGTACCAAGCCAGGGGAGTACAGGACTTCTCAATGGTCAGTATAATTTTTTACAGATTGATCGCAAAGATCTCCAGACGCAGCAGCAGTGGGAGAAACAAAGAGAGGTCACAAAGGTCCAACCCCATCCATTCATAATCACGCTTTCAACCcttttaaacaatgcaaaccacaacacacacatccacaggAAGAAAGAAGAGTGGGCTGCACCATGTCCCCCACTCTGATGGAAACACAGTCAATCACAGCATGGGAATGGAAAAGCACCAAATCTCCTCCTCAACGGATAAAGATACACTTCCATAAAAGAGGTTCAAAGTGTTCAAGTGAAACAGCATCAGATACAGCATGTCCTGAGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133608 True 441 lncRNA 0.44 1 2427461 2427901

Neighbor

gene id symbol gene type direction distance location
slit1a slit1,slit1a,LOC107699140,LOC107753728,LOC107705008,LOC107565895 coding downstream 280865 2093475 ~ 2146596 (-)
nvl nvl,LOC107558213 coding downstream 352683 2060300 ~ 2074778 (-)
heatr5b heatr5b,LOC102314180 coding downstream 390350 2012695 ~ 2037111 (-)
efemp1 efemp1,LOC107753722,LOC107742815,LOC107701580 coding downstream 416067 1997355 ~ 2011394 (-)
vit LOC107680287,LOC107565916,LOC107709440 coding downstream 506836 1899037 ~ 1920625 (-)
LOC122356487 LOC107654083,LOC107715618,LOC107727478 coding upstream 11305 2439206 ~ 2457063 (-)
LOC122356433 LOC107680168,LOC107571251,LOC107567524,LOC107563091,LOC107676802,LOC107653882,LOC107756192,LOC107560357,LOC107717306 coding upstream 30979 2458880 ~ 2466266 (-)
gsta.1 LOC107701971,LOC107734005 coding upstream 50682 2478583 ~ 2480329 (-)
LOC122356775 gtpbp2,LOC107751133,LOC107701968,LOC107699157 coding upstream 60526 2488427 ~ 2497421 (-)
LOC122356217 LOC107719934,LOC107699158,LOC107597732 coding upstream 179179 2607080 ~ 2608868 (-)
G90211 NA non-coding downstream 116332 2304214 ~ 2311129 (-)
G90208 NA non-coding downstream 129237 2287383 ~ 2298224 (-)
G90207 NA non-coding downstream 141252 2285542 ~ 2286209 (-)
G90201 NA non-coding downstream 143115 2239768 ~ 2284346 (-)
LOC122356500 NA non-coding downstream 147315 2265878 ~ 2280146 (-)
LOC122356497 NA non-coding upstream 14346 2442247 ~ 2443484 (-)
G90271 NA non-coding upstream 53469 2481370 ~ 2481642 (-)
LOC122356206 NA non-coding upstream 72634 2500535 ~ 2502458 (-)
G90300 NA non-coding upstream 193335 2621236 ~ 2623909 (-)
G90312 NA non-coding upstream 197003 2624904 ~ 2625273 (-)
G90161 tp53bp2,LOC107582030,LOC107705014,LOC107742808 other downstream 182383 2151837 ~ 2245078 (-)
LOC122356758 ccdc88a,LOC107571560,LOC107701441,LOC107570323,LOC107695193 other downstream 735107 1684449 ~ 1692354 (-)
LOC122356439 LOC107747448,LOC107690165,LOC107678593,LOC107582517,LOC107576986,LOC107708380 other downstream 870414 1554230 ~ 1557047 (-)
si:dkey-228d14.5 si:dkey-228d14.5,LOC107747455,LOC107582513,LOC107708394,LOC107589525,LOC107678589,LOC107690177 other downstream 1139179 1212870 ~ 1288282 (-)
lrmda c13h10orf11,cunh10orf11,c3h10orf11,cssa18h10orf11,LOC107747465,LOC107678567,LOC107708444,LOC105909757,LOC103041229,LOC107582503 other downstream 1496456 687409 ~ 931005 (-)
G90304 NA other upstream 156295 2584196 ~ 2585331 (-)
G90311 polh other upstream 198427 2626328 ~ 2627157 (-)
G90445 znf318,LOC107739464,LOC107655625,LOC107728066,LOC107559766 other upstream 562517 2990418 ~ 3244896 (-)
dlk2 dlk2,LOC107669558,LOC107696386,LOC107559779,LOC107728069 other upstream 853436 3281337 ~ 3298549 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other upstream 994852 3422753 ~ 3435580 (-)

Expression


Co-expression Network