G90324 (cul9,LOC107564217,LOC107669557,LOC107559769,LOC107655624,LOC107706827)


Basic Information

Item Value
gene id G90324
gene name cul9,LOC107564217,LOC107669557,LOC107559769,LOC107655624,LOC107706827
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3187826 ~ 3192113 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU133730
AGCAGATCGGTACCTGCTTCCCGAACCGTTTCCCCAGCAGATGCTGACCAACCTCAGTGAATCTGAGGAGCTTCAACAGGAGTTTCATCTTTACCGCCTACAGCAACTGGACAAAAACCTGGAGGACTTTGAGGAGATGATGGATGAGGACGTTTCTGAACTCGAGGAAGAGGGTGACGTGAAAGTGTTGGTGTTGTCCCCGCGCTGCTGGGTTGTGTCTGCTCCCTGCTACCTCGAGGACCCCAGCAAACACTTCCCTGCCCAACTCTGCACTTACCTGGCCGAATTCACAGACTTTTACGCCAACGGTCAGCGCATGTATAGTTTGACTCACAGTAAGCCTCGGCGGCTGCAGTGGACGTGGCTCGGACACGCAGAGCTTCAGTATGGCTCCTCTACTCTCTACGTCTCCACGCTGCAGATGTACATCTTGCTTCAGTTCAACAAACATGAGGACGTGAACGTGGAGATGCTGCAGCAGGCCACGGGTCTCTCTCCAGCCATGATGAGCCATGCCCTCAAACCTCTCACTGCAGAGAAAGGGGTTCTCACTCACACCGGCTCCAGCCAGGACCCC
>TU133737
TGACGCCGAGGCTGCAGAGGCTTTAGGGCGGACCTGCTGGGAAGCTCTCATCACCCCCATCGTGCAGAGCATCACTATCTCAGAGACATCGACTCTCAGCCCTCTGTCATGGCTGATGAACGAATATTTGGAGAACACTGAATCCTCCAAGAGATGTAAGAGCTCAGCCTCCACCTTCAACTCGCGTGTGCGGCGTCTCACTCATTTGCTTGTCCACGTGGACACCAGCACAGTCGATACAGAAGAGCTCAAACCTCCCATCAAATCCAaagGTATCAACAGAAGCAGAGATTTGAAGAatggTAAAGAGGGCAAGAATAAGGAAACGACGGCAGTGAGCTCATCTTCATCCTCAGGCAAACCAAAAGTGAAGAATACAAGCAGCATCGCAGGCATTGCTTTGTGCTGGCAGGGTGTCGTTCAGCGACAGGTAAAGAGTTTCCTGGATTTGACTTGCAGCCTCCCTGACTTCGTAGAGCGCTACAGGGGTCTGTTCCTCCGGCTAAAAAATGCCATGGAGGAACTTTTGGTCAACACACTGCCTTTGTG
>TU133738
TGACGCCGAGGCTGCAGAGGCTTTAGGGCGGACCTGCTGGGAAGCTCTCATCACCCCCATCGTGCAGAGCATCACTATCTCAGAGACATCGACTCTCAGCCCTCTGTCATGGCTGATGAACGAATATTTGGAGAACACTGAATCCTCCAAGAGATGTAAGAGCTCAGCCTCCACCTTCAACTCGCGTGTGCGGCGTCTCACTCATTTGCTTGTCCACGTGGACACCAGCACAGTCGATACAGAAGAGCTCAAACCTCCCATCAAATCCAGTATCAACAGAAGCAGAGATTTGAAGAatggTAAAGAGGGCAAGAATAAGGAAACGACGGCAGTGAGCTCATCTTCATCCTCAGGCAAACCAAAAGTGAAGAATACAAGCAGCATCGCAGGCATTGCTTTGTGCTGGCAGGGTGTCGTTCAGCGACAGGTAAAGAGTTTCCTGGATTTGACTTGCAGCCTCCCTGACTTCGTAGAGCGCTACAGGGGTCTGTTCCTCCGGCTAAAAAATGCCATGGAGGAACTTTTGGTCAACACACTGCCTTTGTG

Function

symbol description
cul9 Predicted to enable several functions, including ATP binding activity; metal ion binding activity; and ubiquitin protein ligase binding activity. Involved in microtubule cytoskeleton organization; protein ubiquitination; and regulation of mitotic nuclear division. Located in cytosol. Part of cullin-RING ubiquitin ligase complex.

NR:

description
PREDICTED: cullin-9-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133730 True 577 TUCP 0.55 4 3190326 3192113
TU133737 False 549 TUCP 0.51 5 3187826 3189681
TU133738 False 546 TUCP 0.51 5 3187826 3189681

Neighbor

gene id symbol gene type direction distance location
LOC122356067 ppp2r5d,LOC107559765,LOC107696374,LOC106605890 coding upstream 137159 3022616 ~ 3050667 (+)
LOC122356304 LOC107739478,LOC107564218,LOC107728064,LOC107655626,LOC107559768 coding upstream 208577 2971146 ~ 2979249 (+)
LOC122356776 LOC107564218,LOC107739478,LOC107706823 coding upstream 216679 2957658 ~ 2971147 (+)
LOC122357122 cul9,LOC107655624,LOC107669557 coding upstream 236064 2916892 ~ 2951762 (+)
LOC122356236 apmap,LOC107702698,LOC107564208,LOC107717839,LOC107559784 coding upstream 327159 2852563 ~ 2860667 (+)
LOC122356783 LOC107655626,LOC107728064,LOC107564218,LOC107739478,LOC107706823 coding downstream 17679 3209792 ~ 3227749 (+)
LOC122356787 LOC107739478,LOC107564218 coding downstream 37000 3229113 ~ 3231423 (+)
znf318 znf318,LOC107739464,LOC107564219,LOC107728066 coding downstream 42930 3235043 ~ 3246109 (+)
tjap1 tjap1,LOC107728071,LOC107559778 coding downstream 128316 3320429 ~ 3398358 (+)
ncoa4 LOC107739471,LOC107669570,LOC107696383,LOC107728073 coding downstream 225421 3417534 ~ 3426736 (+)
LOC122356074 NA non-coding upstream 166935 3020068 ~ 3020891 (+)
G90339 NA non-coding upstream 170606 3016794 ~ 3017220 (+)
LOC122356240 NA non-coding upstream 306140 2865807 ~ 2881686 (+)
G90292 NA non-coding upstream 558219 2629192 ~ 2629607 (+)
G90290 NA non-coding upstream 562543 2624938 ~ 2625283 (+)
G90326 cul9,LOC107736443,LOC107564217,LOC107669557,LOC107683065 non-coding downstream 7734 3199847 ~ 3201487 (+)
LOC122356226 NA non-coding downstream 54150 3246263 ~ 3247132 (+)
G90365 NA non-coding downstream 123550 3315663 ~ 3315908 (+)
G90373 lrrc73,LOC107696385,LOC107728077,LOC107739469 non-coding downstream 209851 3401964 ~ 3403754 (+)
G90378 NA non-coding downstream 258060 3450173 ~ 3450485 (+)
G90349 NA other upstream 7893 3179427 ~ 3179933 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other upstream 177185 2982559 ~ 3010641 (+)
G90230 NA other upstream 717445 2469945 ~ 2470381 (+)
LOC122356772 pim3,LOC107732271 other upstream 903019 2264746 ~ 2284807 (+)
cutc cutc other upstream 1006997 2176009 ~ 2180829 (+)
LOC122356782 NA other downstream 15298 3207411 ~ 3209753 (+)
G90343 ppp2r5d,LOC107696374,LOC107559765 other downstream 79212 3271325 ~ 3274372 (+)
G90348 dnph1 other downstream 85724 3277837 ~ 3280997 (+)
G90377 NA other downstream 257288 3449401 ~ 3450017 (+)
prkn park2,LOC107739476,LOC107669573,LOC107696378 other downstream 428293 3620406 ~ 3713763 (+)

Expression


Co-expression Network