LOC122356072 (znf318,LOC107739464,LOC107564219,LOC107728066)


Basic Information

Item Value
gene id LOC122356072
gene name znf318,LOC107739464,LOC107564219,LOC107728066
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 2982559 ~ 3010641 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU133784
CGGCACAGGAAGTGAGCGCAGACACAGTCGTTTGAGTGTGATGAATACGCTCTCATTCATATTGAATTTTTTGAAATTGCGTTTATCTGTTGAGGGTGATAATCGCCACCCCGCGCCCGGGATAACAAGGACTTGACACCGACGCGGAAACAGCGGCTACGCGTCGTTATGTACCGCGGTTCTAGGCCGCACAGAGGCGGCTATCATCCCCCTCCGTCGCGTGGTTTCGGTTCCCGTCCTGGACCAGGCCACCCCCCGGATCCGTACCGCCGGCCCTCCCCGCGGAGGAGGTACTCACCGGCCGATGAATACCGAGGAGGGAGACCTCCGCGAGCCTATGGGAGATACAGCCCATCACCTCCTCGTGGTGGTCTCCCTGTAGATCACAGTCTGGTTATAACTGTGGAGCAGGCTGACCCATCCAAGCGAAGCGCCCTATGTCCGAGATTATGCCGCGGGAGTCACATCATAAGCCCTATTACTCTCAAGGAAGTCGAGCTATGATGGACACAGCGATCGAGGTTCGAGGAGGCGCAGTGTTAGCCGCGGGAGGAGCA
>TU133785
CGGCACAGGAAGTGAGCGCAGACACAGTCGTTTGAGTGTGATGAATACGCTCTCATTCATATTGAATTTTTTGAAATTGCGTTTATCTGTTGAGGGTGATAATCGCCACCCCGCGCCCGGGATAACAAGGACTTGACACCGACGCGGAAACAGCGGCTACGCGTCGTTATGTACCGCGGTTCTAGGCCGCACAGAGGCGGCTATCATCCCCCTCCGTCGCGTGGTTTCGGTTCCCGTCCTGGACCAGGCCACCCCCCGGATCCGTACCGCCGGCCCTCCCCGCGGAGGAGGTACTCACCGGCCGATGAATACCGAGGAGGAGACCTCCGCGAGCCTATGGGAGATACAGCCCATCACCTCCTCGTGGTGGTCTCCCTGTAGATCACAGTCTGGTTATAACTGTGGGGAACGAGCTGACCCATCCAAG
>TU133786
GAGTATGATGATAAGCCTCCATCCCTATTCATCAACTGACTgaccaaaaaaactatttttaaaccgTACGCTTTCGCTTTCTCGCTGTATTTAGGAGAGTAGGTAAACAAAACGATGCTACTTCGCTGCGTTCAATTGGCTGTTCCCGGCATGACGTCATGTCCGGTGAGTGAGGGGCCAATGGCGGCACAGGAAGTGAGCGCAGACACAGTCGTTTGAGTGTGATGAATACGCTCTCATTCATATTGAATTTTTTGAAATTGCGTTTATCTGTTGAGGGTGATAATCGCCACCCCGCGCCCGGGATAACAAGGACTTGACACCGACGCGGAAACAGCGGCTACGCGTCGTTATGTACCGCGGTTCTAGGCCGCACAGAGGCGGCTATCATCCCCCTCCGTCGCGTGGTTTCGGTTCCCGTCCTGGACCAGGCCACCCCCCGGATCCGTACCGCCGGCCCTCCCCGCGGAGGAGGTACTCACCGGCCGATGAATACCGAGGAGGGAGACCTCCGCGAGCCTATGGGAGATACAGCCCATCACCTCCTCGTGGTGGTCTCCCTGTAGATCACAGTCTGGTTATAACTGTGGAGCAGGCTGACCCATCCAAGCGAAGCGCCCTATGTCCGAGATTATGCCGCGGGAGTCACATCATAAGCCCTATTACTCTCAAGGAAGTCGAGCTATGATGGACACAGCGATCGAGGTTCGAGGAGGCGCAGTGTTAGCCGCGGGAGGAGCA
>XM_043254525.1
CCCGGCATGACGTCATGTCCGGTGAGTGAGGGGCCAATGGCGGCACAGGAAGTGAGCGCAGACACAGTCGTTTGAGTGTGATGAATACGCTCTCATTCATATTGAATTTTTTGAAATTGCGTTTATCTGTTGAGGGTGATAATCGCCACCCCGCGCCCGGGATAACAAGGACTTGACACCGACGCGGAAACAGCGGCTACGCGTCGTTATGTACCGCGGTTCTAGGCCGCACAGAGGCGGCTATCATCCCCCTCCGTCGCGTGGTTTCGGTTCCCGTCCTGGACCAGGCCACCCCCCGGATCCGTACCGCCGGCCCTCCCCGCGGAGGAGGTACTCACCGGCCGATGAATACCGAGGAGGGAGACCTCCGCGAGCCTATGGGAGATACAGCCCATCACCTCCTCGTGGTGGTCTCCCTGTAGATCACAGTCTGGTTATAACTGTGAGCAGGCTGACCCATCCAAGCGAAGCGCCCTATGTCCGAGATTATGCCGCGGGAGTCACATCATAAGCCCTATTACTCTCAAGGAAGTCGAGCTATGATGGACACAGCGATCGAGGTTCGAGGAGGCGCAGTGTTAGCCGCGGGAGGAGCAGGCGGCGGAGCCGCAGTCCTGGCTACGGGCGCAGCAAGTCGCCAGCGCAGCCGCATGGCAGGAGTCGGAGCTACAGTCGCGGCAGGAGTCCCGCAGCGAAGAGCCGAGCGCGCAGCAAGAGCAGAACCCGTGGGAGGAGCTACAGCAGAAGTCGAAGCAGAAGCGGAAGCCAGTCGCGCAGACAGAGCAGGGCCAGGAGCAGGGCGCGGAGCAAGAGCCCGCGGAGCCGCAGCCGCGAAAGGAGCCGCAGCAGGGGAGAGCAGAGGCGGAGTCGTGCTAGGAGCTGGGCCGGAGCCAGGCGCCAGTCGGGCGGAAGCAGTAGCAGCAGCGGCTCCAGTAGAAGTCGCCACAGCAGCGTCAACAGGAGAGTCAAATCAGGCGACTTTAGGGTGAGAGAGGAGGACTTTTCTGAGCTGGAGAAGGCCAGGCGACGGAAAGAAATCCAGGACATGCTTGTGCAGCCTGCGAAGTCAATTTTGAAGAAAAGAATGGATTCTTCCGAGACCGATTCTCCTATGCTAGTACAGAATAGTGACTCCCCTCGAGGAAATCCAGATGGTGGTCTTTCACATGAGGCTGAACAGCTTCTCTCCGCACTTTCCAAAACCATGGAGCCAGACTTGTTAGCATCCATGCTGGGTAAAAGCTCTGATAGTGGTGTTCTTGAAGAGCTGATTGGTAAAATCCAACCAGCCAGAGGGGGCGGAGGTGACCTGCTCCTCCCTCACGAGAAGGGAAGACAGGAGAAATTAGACCTCACACAATTCCTAGGAATGATATCTGAGGTCACCCAACCACAGAATGTAAAAAAGAGTCATCCAGATATTGAAGATGAGGAGAAGTTCCTCTATGgggatgaagaagaagagggCAGTGAGGTGGCGCCAGCAAATTCGAACTTTCCAGGTACAAGTTACCCTCAGTCTTGTGAAATGCAAATAAGAGAACCTTACACATTTGGCCATACAGTAGACAATGTGATGAGCCATTCACATAGAGACAGtaggcagacagacaggcatCATTCCTCCTCCACACCTGAGGTACACGCCAAGGAAGGACCTAATAACTTCCCACCTGGAGTTGGGCCACAGGACGTCAAGGTGAGGAAAGAGGTGGAGGAATATGAGAAGATACAAGATTTGCTGAAAACAATTGGCTTGGACCTGGGTGTGGCTGAGATAAGCAAGATGGCTGCCAGGACGCAGGCGCGCCTGCACGGAAACACCCTTGTGAAGACACCAACTCGTCGGCATTCGGATAGAAAGCACCGGAGCCGTAGCAGGAgttacagcagcagcagcagcaggagctCCAGTTGCAGTCGGAGTAGCAGCCGAAGCAGAAGCAGAAGTCCTCAAAGCCGAAGTGGCAGTTTGGATCACGCTTCAAGTCGCAGCAAGAAAAAGCCAGCTTCCCCAGAAAAAAGATCTCCACTCTCACATAGTCAGAACAAGAAAGATGCTCAACCTAGCATTTCTCAAGCAGAAAGCAGCTGGCCTACCACACCCAATGTGGGTCCTGGGTCTCAGATGTATCCCTCCCAAACCAGCCACCCGACACATCCCATGTCCCCATACCCTGGGCCGCCTCCACGTGGGGTAATGCCACCTGACTACCCACCGAGAGGTTACGATCCGTATGGCAATTATGTTCCATATATGCCTCCGGGATGGCCGATGTACCCACCTCCAAGTACGGTACCTCCTCCCAGTCCAATGGATCCCTACAGCCACCCTAACATTGAGCGACCCTTTCTTAAAATCATCAAAACTGTGCGAGCGAGAGTAAAGGTGATGATCATAAAGGTTACAACCCCTAAATCAGATCCTTTGGCCTCTAAAGCGATCACTAGTGGCATTCAGAGGAAAGAAATGGAAGAGAAGAATACTGCTAGCCAAAAACAAAAGGTCATGGAAGAGCTTGAAAAGCTAAGAAAGGAGAAAGACGTGCGAcacaaaaggaaagaaaatctCTTAAAGGATGTGGAGACATTGAGAAAGCAGCAAGGGGAGCTTCTTCGAAAGAAGCGAAGGGAGAAGGATGGGCACAAGGACCCTGTACTCATCGAACTCAGTCAGCTCCAAGAAAATGCAATGGCCCAAATCTCTAAATTGCGTGCTGAACAGAGAGAGGCAGATCAAAAATATGAAGAGCTGGTCAAAGTAGCTCTTATTCTCGGTATAGACCACAAAGACTCGAAGATCTCTGGGGACCATGCGCAGCAGCCCCTTCAGAGTAAGAAGGAGTCAGCCAGAAGCCCAGAGAAATCAGGGGCCAAAACCAGCACCTCATACAATAAGGTAGCCTCCTCAAAATCAAGAGCGTCTCCTGAAAAACCCAAGTCATTTCTTCCGTCGAGCTGTCATTCCCTGGACACTGCTGCCGAGCAGTTCGAGTACTATGATGCAGGAAACCACTGGTGTAAAAACTGCAATGTTACAAGTGGTTCAATGTTtgattatttcatgcatttgcaCAGCAAAACCCATAGGAAGACTCTAGATCCTTATGACAGACCTTGGGCAAAATCAGAGAGTGAAAAGAAACCCCCTGTTGGAAAGAGGACTTCTAAGCCAGCCAAagGCTCTGAGTTCTTGATCCCTGTAAGGGGATTCTTCTGCCAGTTATGTGAAGAGTTTTTTGGTGATCCCATTTGTGCTGAGGCTCATGTCACCTGCCATATTCACAATGAGAAATACAAGGCAAAAATTTATGAAAATCCCCTCTATGAACAAAGGAGGAACTTGGACCGTCAGGCTGGCTTGGAGAGCCAAAAGAGTTCAGAGCACAAACGAAAACGTGAAGATGACGAACAGGATGATGTGAAGAAATCCAAACACAGTAAaggaaaaatatcaagcaaTGAAGTGGACACAAAACCACAGTACAACAAGGAAGAGGAGAATAAGAATATCAAAGGAGACAATAAACCTAAGGAGAAATACAAGAAAGAGGATATAGATAAACAGAAATACAAGAAGGAGGATGATGAAAGAGGCAAAATAAAAGAGGATGAGAGAAGGTACAAAAAAGATGATGATGAGCGAAACCGCTTCAGAAAAGAAGAGGAATACACGTATAGATACAGGAAGGAGGAAGGGGAGAGATCCAGGTATGAAGAGGACAGATTTAGAAAccgagatgatgatgatgaacacTATCGATATAGAGAAGAGGACGACAGATACAGATTTAGAAAAGATGATGACAGAGGCCGATATAGTAGAGAAGAGGAGAAGTCAAAGTACAGCAGAGAAGATGATAAGAAGTACAAATACACTCGGGAGTTTGAAGAGAAGAAGTCAAAATACAAGGATGAGGACTGGGGCAAGTGGTCGAAATCCAAGTGGGACGAGGACAAAGATGGTaatgaaaagtatgaaaaaaaggAAGATAAAGTTCAGCACCAGAAGAGCAAGGCTAGTTATTCCAAAGATGACAAGGAGAGCACAGGAAAATTCAGTGGTAAAGATGGCAAATCAGAATCAGAGAAACCCAGCGAGCCTCCTAAAATATTATGTGGCCCAAGTCCTGCCTTGCTTGCTAAACTTCGCAAGAAGAACGAGGAAGCTGCTGGTCGGCCTGGCTTTGGAAAATTTGGTCTGAAAAAGCCACAGAAGACAGCACTGGAGAAAGAGGCAGAGAGGATGGCGGCACAGTTCTTAAAGGAAGAGGAAGACAGTGTTCCTTCTGAAATGGCAGAAAACAAGGGTGCTGAACTTGATCCTTTTTCCAAGTCTATAGCTGCTGCAAAATCAATTGCTATCAAACTGACAGGAAAGGCTTTGCTGCCCCCTTCAGGTGAATGGCTAgcattcaatgaaaataaaactaatccTACTTTACCTCCTCCCACATCTCCCATGGTTATTAGGAAGTCTTACACAGGTGTGCAAAATAAACCAACACCATCTGCTGATAAATCTTCTGCACCCGTAACAGGAGCTCAGAAGGGCCCAACATTGTCAGCAGACCTCATCTCTAAGGCATTTAGTGGAGAAGAGgtgcaattaaaacaaacaaaggacACCCCTGCAAACCCTGTAGATATCTTCAGCATACCCGTACCTGTTCAGTCTCCCACTGCAGCACCAAAAATGGCAAATTTAAGCCAGATGGAACCTGTTACTCCCAGTCAATGTGTTATTACTCTTGAGTCTGATGTGGCTGCTCCAGGAGTGCCTGAGGAGGAGCAGAAGCTCACCGTAATCCTTCGTCCTCCTCCTCAACTTTCTTCAAAAGCCAGAGACCCGCCCCCAAGAATGGTAAAGCCAAAGACAACTCTTGCAgcaggaaaagcaaaagatttGTTTGACATTTTCTACAGTAGCAGTGCTGCAGTAAAAACCTCAGTTTGCAGCAGTGTTGGTGACAAACAAAACTTCGGATTTGCTCCTCAAGACAGTGGCTCAACCTGCAGAGAGTCCAACAATAAAGTCAAAAATGCTAGTGATGTTTGCAAGAGCGGAGAACCTCTCAAGGTCAATGACTCGAAAGTTCCCCTGAGAGATGAACGTCTCAAGAACGAGGAGTCAGGAGTTAACTTGAGAGAAGAACCTCTTAAGAATGAGAACACAGATCTTGCCCAGAGAGAAGAACCCCTCAAAAATGAGGACTCAAATCTTACACTGAGAGAAGTATCCCCCAATAATAAATACTCAGAAGTTACCCAGACAGAAGAACCCTCCAAGAATGAGGGTTTAAATATTTCCCGGAGAGAAGAATCTCACAAGAACATAGACGCAGAAGTTGCCCAGATTGCAGAACCCACTGAGAATGAGGACTTGAGTCTTGCCCAGAGAGAGCAATCTCTAGAAAACAAAGGCTCAGAAGTTGCCCAGACAGGTGAACCCCCCAGGAATGAGGGCTCAAATCTGGTCTGGAGAGAGGAATCTCCCAAGAGTGAAGACTCAGACGTTGGCCAGACAGAAGAATCCCCCAAAAATGAGTCGTCAAATGTTGCACAAAGAGAGGAATCTCCCAAGAACGAGGACTTTGAACAAGTCTTTGAGGATACCATCTTAAAACATGACCTTCCAGATGAAGATAATGCAAAAGAAGATTTTGTTGATCAACAAGTTCTTAAATCTATTGAAATCTCTGTGGGGGATATAACTGTGATGGAAGTAGATAGTCAGAACACAATGCAGACAAATAATGATGAGGAAAACCCTCTGGAATCTGAGGAACCCATGTCGTTCTCTCCCCTTCCCGGGTCTTTCACTGAGCAAATAAACTTGGATACATTTGAATTCAATTTTGAGACTTTGTAAAGGATCTACGAAGAGTAGGTTTAGGGATGTATATGATACCTCTGAATGTAAAtaagtgatttatttctttgtataaGTATTCTTTGTATTTGCTTTATCCAGTTAGAATGTTTCATGTCTATTCTTAACCTTTTGGCAGGTAATGCCAGTGAAAACGTGGACTGAAAAGCATTCATTCTGAAGTGGATGCTGGGGAAGGAATCCCTCtaagaaaatgaaaactttcATCAAGTAACGAACCCTTAGTATGTGTAAAAGTTTTGCTATCTTGTCAAAAGCACCTGGTGTTGAGCTACTTGTTTCCTTATTCTGTTTCCAGCAGAAACCATTCCTTTTTCCCCAAAggtaatgtaaaaacatataatgAATATGATGAGTATCAAACATTTAAGTCTGTAAAACCATTTGCTTTGTTCgttccatttaaataaatgaagatattttaatgcagGAGCCAGAAAGATCCAGGCTCAGAGAAGAGAAATGGTGTGGAGTTCATGCTTCAAGGACATATGCGTTCACAACTGTGGCCAGAAAATGTCAGGCTTGGCCTCCATAGTTTTTATTACACTGTACTCTGTATTGATGACTTTtctttccagtttttttttttaaggaactaATGTAGTTCACATTGCTACCACGCTACTTTAGCATCTGCAGATAGTTGGTGTAATTGCACATGTTCTGTGCTAGCTCAAATAAATCACAGCAACCCTTTCTGTCTTTGCTTTTTACTCATATGCTTATTACCGCTGGTGTTAGACTTGTGCAGTTCTCTTTTTACGTTTTGCACACATTGGGCCTCGTTCATAAAACAGGAGCAGAATGCGTTTCTGTGTATATCGTCCATAAAACGTTTCTATTATGCCACACTGAGTGAAGCAGTTTGCCTCAAGCTTGGTTTTATGAAcgttatatatgttataaagtTCATTACGTTGGTGTTTTATGAATGAGGCATACCGCACTGTATTTGCATGTGCATCAAATACGAATGTAAGTAACATTACTAGTATTTATTATAAGTATTAAACTAATATGTTGTACCTGCTTACAGTAAACTCTTGAAATGacattaaacttgttttatctGTATTTGCATTA

Function

symbol description
znf318 Predicted to enable nucleic acid binding activity and zinc ion binding activity. Orthologous to human ZNF318 (zinc finger protein 318).

NR:

description
PREDICTED: zinc finger protein 318-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133784 False 557 TUCP 0.58 3 2982743 2984609
TU133785 False 427 lncRNA 0.58 3 2982743 3010641
TU133786 False 741 TUCP 0.55 3 2982559 2984609
XM_043254525.1 True 6979 mRNA 0.46 19 2982703 2994788

Neighbor

gene id symbol gene type direction distance location
LOC122356304 LOC107739478,LOC107564218,LOC107728064,LOC107655626,LOC107559768 coding upstream 3310 2971146 ~ 2979249 (+)
LOC122356776 LOC107564218,LOC107739478,LOC107706823 coding upstream 11412 2957658 ~ 2971147 (+)
LOC122357122 cul9,LOC107655624,LOC107669557 coding upstream 30797 2916892 ~ 2951762 (+)
LOC122356236 apmap,LOC107702698,LOC107564208,LOC107717839,LOC107559784 coding upstream 121892 2852563 ~ 2860667 (+)
ppm1g ppm1g,LOC107660231,LOC107717838,LOC107754752,LOC107702697 coding upstream 136299 2839850 ~ 2846260 (+)
LOC122356067 ppp2r5d,LOC107559765,LOC107696374,LOC106605890 coding downstream 11975 3022616 ~ 3050667 (+)
LOC122356783 LOC107655626,LOC107728064,LOC107564218,LOC107739478,LOC107706823 coding downstream 199151 3209792 ~ 3227749 (+)
LOC122356787 LOC107739478,LOC107564218 coding downstream 218472 3229113 ~ 3231423 (+)
znf318 znf318,LOC107739464,LOC107564219,LOC107728066 coding downstream 224402 3235043 ~ 3246109 (+)
tjap1 tjap1,LOC107728071,LOC107559778 coding downstream 309788 3320429 ~ 3398358 (+)
LOC122356240 NA non-coding upstream 100873 2865807 ~ 2881686 (+)
G90292 NA non-coding upstream 352952 2629192 ~ 2629607 (+)
G90290 NA non-coding upstream 357276 2624938 ~ 2625283 (+)
G90232 NA non-coding upstream 500784 2481369 ~ 2481775 (+)
G90220 NA non-coding upstream 545050 2437106 ~ 2437509 (+)
G90339 NA non-coding downstream 6153 3016794 ~ 3017220 (+)
LOC122356074 NA non-coding downstream 9427 3020068 ~ 3020891 (+)
G90326 cul9,LOC107736443,LOC107564217,LOC107669557,LOC107683065 non-coding downstream 189206 3199847 ~ 3201487 (+)
LOC122356226 NA non-coding downstream 235622 3246263 ~ 3247132 (+)
G90365 NA non-coding downstream 305022 3315663 ~ 3315908 (+)
G90230 NA other upstream 512178 2469945 ~ 2470381 (+)
LOC122356772 pim3,LOC107732271 other upstream 697752 2264746 ~ 2284807 (+)
cutc cutc other upstream 801730 2176009 ~ 2180829 (+)
tp53bp2a tp53bp2,LOC107582030,LOC107705014,LOC107558217,LOC107742808 other upstream 816531 2153422 ~ 2166028 (+)
lgi1a lgi1a,lgi3,LOC107565913,LOC107701579,LOC107753733,LOC108260544 other upstream 985249 1989872 ~ 1997310 (+)
LOC122356070 dnph1 other downstream 41341 3051982 ~ 3278260 (+)
G90350 dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069 other downstream 164094 3174735 ~ 3285406 (+)
G90349 NA other downstream 168786 3179427 ~ 3179933 (+)
G90324 cul9,LOC107564217,LOC107669557,LOC107559769,LOC107655624,LOC107706827 other downstream 177185 3187826 ~ 3192113 (+)
LOC122356782 NA other downstream 196770 3207411 ~ 3209753 (+)

Expression


Co-expression Network