G90348 (dnph1)


Basic Information

Item Value
gene id G90348
gene name dnph1
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3277837 ~ 3280997 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU133811
TGCGGATGCTCTCCATACTTTCCGGTGAAAGCTGCTCCTGTCGAGGAAAGCCGCTCTCGTGTCGTTGTCAGACAGCACGAAGACATTCGCAAAGCATGAACATATATTTTTGCGGAAGCATCCGCGGAGGGAGACAGGACGTGAACGTTTACCAGAGAATAGTGAAGAAGTTACAGCGGTATGGCACGGTTTTGACGGAGCACGTGAGCTCGGGCAGTCTGTCGGAAAAGGGTGAAGATGCGGCTTTGGGTGGAGATAAAGCCATCCATGATCGAGACGTGGAGTGGCTGATGCTGTCTGATGTGATAGTAGCCGAGGTGACCCAGCCGTCTTTAGGAGTGGGTTACGAGCTCGGCGAAAAGCGGCGCTCAACAAGAGGGTTTTCTGTCTCTTCAGACCTTCGTCTGGCAAAGTGCTGTCTGCCATGATCAGAGGAGCTTCCGCAAACTCGCTCTTCCAAGTCCAGGACTACACAGAGGAAGAAGTCGAGAGCGTCTTGGAGAAATACTTTGAAGGCGTCGCCAAGAACCGATGAGCGCGTTTCAGCAAATCGTAACCAGATAAGCGCAACTTCTATATGCTTCTCCTCTCATTACAGAAAGTCAGTAGGACGTGCTTTCTTCGTTTTACATTCAATTTTCAGTGGAcatgtattgtgatttacatctGAATAAATCTCTTTGGGTTAAACACGGGTGTTGCGCCGGCTAATGTAGTTTAAATAGATTATGGGCCATAAATATCACTGTGAGATC
>TU133812
CTCCGTGTGAGAGCCGTTCATCCTGTCTGGGTCTTGATTGAGAGGCTGGTAATAGTACCCGGCACTGTCCTCGTCTCCGGCGcctccttcctcctcctcctcctcctctatGTCCTCCCCGCTCCACTCCTCCTGCGCCGCGGTGTCTGAGGGCCGCTCCTGCAGCGCATCCTCCTCGGGGTTCGGTGAAGATGCGGCTTTGGGTGGAGATAAAGCCATCCATGATCGAGACGTGGAGTGGCTGATGCTGTCTGATGTGATAGTAGCCGAGGTGACCCAGCCGTCTTTAGGAGTGGGTTACGAGCTCGGCGAAAAGCGGCGCTCAACAAGAGGGTTTTCTGTCTCTTCAGACCTTCGTCTGGCAAAGTGCTGTCTGCCATGATCAGAGGAGCTTCCGCAAACTCGCTCTTCCAAGTCCAGGACTACACAGAGGAAGAAGTCGAGAGCGTCTTGGAGAAATACTTTGAAGGCGTCGCCAAGAACCGATGAGCGCGTTTCAGCAAATCGTAACCAGATAAGCGCAACTTCTATATGCTTCTCCTCTCATTACAGAAAGTCAGTAGGACGTGCTTTCTTCGTTTTACATTCAATTTTCAGTGGAcatgtattgtgatttacatctGAATAAATCTCTTTGGGTTAAACACGGGTGTTGCGCCGGCTAATGTAGTTTAAATAGATTATGGGCCATAAATATCACTGTGAGATC

Function

symbol description
dnph1 Predicted to enable deoxyribonucleoside 5'-monophosphate N-glycosidase activity. Predicted to be involved in deoxyribonucleoside monophosphate catabolic process and positive regulation of cell growth. Predicted to be located in nucleus. Orthologous to human DNPH1 (2'-deoxynucleoside 5'-phosphate N-hydrolase 1).

NR:

description
PREDICTED: 2'-deoxynucleoside 5'-phosphate N-hydrolase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133811 True 755 TUCP 0.49 4 3279202 3280997
TU133812 False 709 TUCP 0.52 4 3277837 3280997

Neighbor

gene id symbol gene type direction distance location
znf318 znf318,LOC107739464,LOC107564219,LOC107728066 coding upstream 31728 3235043 ~ 3246109 (+)
LOC122356787 LOC107739478,LOC107564218 coding upstream 46414 3229113 ~ 3231423 (+)
LOC122356783 LOC107655626,LOC107728064,LOC107564218,LOC107739478,LOC107706823 coding upstream 50088 3209792 ~ 3227749 (+)
LOC122356067 ppp2r5d,LOC107559765,LOC107696374,LOC106605890 coding upstream 227170 3022616 ~ 3050667 (+)
LOC122356304 LOC107739478,LOC107564218,LOC107728064,LOC107655626,LOC107559768 coding upstream 298588 2971146 ~ 2979249 (+)
tjap1 tjap1,LOC107728071,LOC107559778 coding downstream 39432 3320429 ~ 3398358 (+)
ncoa4 LOC107739471,LOC107669570,LOC107696383,LOC107728073 coding downstream 136537 3417534 ~ 3426736 (+)
LOC122356604 LOC107739472,LOC107565599,LOC107669574 coding downstream 153526 3434523 ~ 3440314 (+)
LOC122356793 LOC107669554,LOC107696371,LOC107578696 coding downstream 432836 3713833 ~ 3717294 (+)
si:ch73-193i2.2 LOC107728794,LOC107590009,LOC107696375,LOC107739482 coding downstream 436299 3717296 ~ 3729468 (+)
LOC122356226 NA non-coding upstream 30705 3246263 ~ 3247132 (+)
G90326 cul9,LOC107736443,LOC107564217,LOC107669557,LOC107683065 non-coding upstream 76350 3199847 ~ 3201487 (+)
LOC122356074 NA non-coding upstream 256946 3020068 ~ 3020891 (+)
G90339 NA non-coding upstream 260617 3016794 ~ 3017220 (+)
LOC122356240 NA non-coding upstream 396151 2865807 ~ 2881686 (+)
G90365 NA non-coding downstream 34666 3315663 ~ 3315908 (+)
G90373 lrrc73,LOC107696385,LOC107728077,LOC107739469 non-coding downstream 120967 3401964 ~ 3403754 (+)
G90378 NA non-coding downstream 169176 3450173 ~ 3450485 (+)
G90381 NA non-coding downstream 188450 3469447 ~ 3489791 (+)
G90388 NA non-coding downstream 221071 3502068 ~ 3543652 (+)
G90343 ppp2r5d,LOC107696374,LOC107559765 other upstream 3465 3271325 ~ 3274372 (+)
LOC122356782 NA other upstream 68084 3207411 ~ 3209753 (+)
G90324 cul9,LOC107564217,LOC107669557,LOC107559769,LOC107655624,LOC107706827 other upstream 85724 3187826 ~ 3192113 (+)
G90349 NA other upstream 97904 3179427 ~ 3179933 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other upstream 267196 2982559 ~ 3010641 (+)
G90377 NA other downstream 168404 3449401 ~ 3450017 (+)
prkn park2,LOC107739476,LOC107669573,LOC107696378 other downstream 339409 3620406 ~ 3713763 (+)
pkdcca pkdcca,LOC107669579,LOC107739483,LOC107718010,LOC107695038,LOC107590011,LOC107586469 other downstream 528056 3809053 ~ 3832550 (+)
G90660 epcam,LOC107699293,LOC107727368,LOC107586477,LOC107707148,LOC107678540,LOC107707150,LOC108422531,LOC107723711 other downstream 901502 4182499 ~ 4353931 (+)
si:ch211-250c4.5 LOC107727386,LOC107699305,LOC107586489,LOC107708409,LOC107678597 other downstream 1280651 4561648 ~ 4695842 (+)

Expression


Co-expression Network