G90350 (dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069)


Basic Information

Item Value
gene id G90350
gene name dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3174735 ~ 3285406 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU133814
ATACAGAGTCACGCTGAGCAAACCTGTCCCAGTCAACCGCTCCCAGGGGACCACTCCCAGCGGGGATGAAAGACGCTCGTTCAAAATCTCAGTGGTGACTCAGCATGGAGCAGAAGCACTGGAAGGTGGAGACTCGGTCTATACAGCGTCCTCCGTTGAGGCAGGGCTGGCCGGCGCAGTCGTCCAGGTTGATGGTGCAGAAACGGCCAGTGAAACCCGCAGGGCACAGACAGGAAAAACGGTTCACGCCATCCAAACAGGTGGCACCGTTGGCACAGGGGCGCATCAGGCAGTCGTCCATGTTGGTCTCGCAGCGGGGCCCCGTGAAGCCGGCCAGGCATCGACAAGACAGTTCTGGAGCGTAACCACCCAGATCCTCGCAGAGACCACCATTCTTGCAGGGGCACTTGGTCTTTTGGCAAGGTCCTGTTTTCAGCTCACAGTCCCGCCCATGAAAGCCTTCGGGACACAAGCAGCTGTAATCCCCAGAGTCATTCAAGACGCAAGTAGCTCCATTCTGACACGGCTGCTCTCTG

Function

symbol description
dlk2 Predicted to enable Notch binding activity. Acts upstream of or within negative regulation of Notch signaling pathway; negative regulation of angiogenesis; and vasculature development. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DLK2 (delta like non-canonical Notch ligand 2).

NR:

description
PREDICTED: protein delta homolog 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133814 True 536 TUCP 0.58 3 3174735 3285406

Neighbor

gene id symbol gene type direction distance location
LOC122356067 ppp2r5d,LOC107559765,LOC107696374,LOC106605890 coding upstream 124068 3022616 ~ 3050667 (+)
LOC122356304 LOC107739478,LOC107564218,LOC107728064,LOC107655626,LOC107559768 coding upstream 195486 2971146 ~ 2979249 (+)
LOC122356776 LOC107564218,LOC107739478,LOC107706823 coding upstream 203588 2957658 ~ 2971147 (+)
LOC122357122 cul9,LOC107655624,LOC107669557 coding upstream 222973 2916892 ~ 2951762 (+)
LOC122356236 apmap,LOC107702698,LOC107564208,LOC107717839,LOC107559784 coding upstream 314068 2852563 ~ 2860667 (+)
tjap1 tjap1,LOC107728071,LOC107559778 coding downstream 35023 3320429 ~ 3398358 (+)
ncoa4 LOC107739471,LOC107669570,LOC107696383,LOC107728073 coding downstream 132128 3417534 ~ 3426736 (+)
LOC122356604 LOC107739472,LOC107565599,LOC107669574 coding downstream 149117 3434523 ~ 3440314 (+)
LOC122356793 LOC107669554,LOC107696371,LOC107578696 coding downstream 428427 3713833 ~ 3717294 (+)
si:ch73-193i2.2 LOC107728794,LOC107590009,LOC107696375,LOC107739482 coding downstream 431890 3717296 ~ 3729468 (+)
LOC122356074 NA non-coding upstream 153844 3020068 ~ 3020891 (+)
G90339 NA non-coding upstream 157515 3016794 ~ 3017220 (+)
LOC122356240 NA non-coding upstream 293049 2865807 ~ 2881686 (+)
G90292 NA non-coding upstream 545128 2629192 ~ 2629607 (+)
G90290 NA non-coding upstream 549452 2624938 ~ 2625283 (+)
G90365 NA non-coding downstream 30257 3315663 ~ 3315908 (+)
G90373 lrrc73,LOC107696385,LOC107728077,LOC107739469 non-coding downstream 116558 3401964 ~ 3403754 (+)
G90378 NA non-coding downstream 164767 3450173 ~ 3450485 (+)
G90381 NA non-coding downstream 184041 3469447 ~ 3489791 (+)
G90388 NA non-coding downstream 216662 3502068 ~ 3543652 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other upstream 164094 2982559 ~ 3010641 (+)
G90230 NA other upstream 704354 2469945 ~ 2470381 (+)
LOC122356772 pim3,LOC107732271 other upstream 889928 2264746 ~ 2284807 (+)
cutc cutc other upstream 993906 2176009 ~ 2180829 (+)
tp53bp2a tp53bp2,LOC107582030,LOC107705014,LOC107558217,LOC107742808 other upstream 1008707 2153422 ~ 2166028 (+)
G90377 NA other downstream 163995 3449401 ~ 3450017 (+)
prkn park2,LOC107739476,LOC107669573,LOC107696378 other downstream 335000 3620406 ~ 3713763 (+)
pkdcca pkdcca,LOC107669579,LOC107739483,LOC107718010,LOC107695038,LOC107590011,LOC107586469 other downstream 523647 3809053 ~ 3832550 (+)
G90660 epcam,LOC107699293,LOC107727368,LOC107586477,LOC107707148,LOC107678540,LOC107707150,LOC108422531,LOC107723711 other downstream 897093 4182499 ~ 4353931 (+)
si:ch211-250c4.5 LOC107727386,LOC107699305,LOC107586489,LOC107708409,LOC107678597 other downstream 1276242 4561648 ~ 4695842 (+)

Expression


Co-expression Network