LOC122356782


Basic Information

Item Value
gene id LOC122356782
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3207411 ~ 3209753 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU133820
CCCCATCACGACTTCGGACAGCAGCCCCCCAGAATGAGGATGATGGACGACATGGAAAGAGATCGAGGGTTTATGCAAGAGCCGCAGGGATTCATGGTGAACGACGGGCCTTTTAACCGGATGGATTTCCCCGACAGGCACGAATGTCGCCCTCGCTTTGAGGGACCTGATCCAGCTTTCCGTCATCAAGAGTTTGGAAACAGACCGCCTGCACCAGCTTTACCGTTTTACCGTCCAGAGCTTGAGTATGAACCGCGTTTCCGTTCCCCGGAGTTTTGTGACAGACCTCGAGACTTCTGTCCGCCCGAGTTTAGGGGCAGACCCCCGAACTTCCGCCCTCCTGAGTTTGACGGGGGGCCAGGTTTCCACATGATGAACCCTGCTTTCGACCAAATGGAGCAGTTTGGTCCAAGAGACCAACATTATATGCCGCCAATGGACCCCCATGGCAATCATTCGTttggagagagaggagggttTGCTGCACCGCTGGCACCTGATTTCCGGGGCCCGGGGCCGGTACAGCCACCATCTGAGGCGTTCAGTAGCGCGCCTCGTCCCGCCTGTTCACCCCAACCTCCACAGAAAAAAGATCAGCTGGCTCCGAAAGAGACTGAACCGCCTAAATCGATGGCTTTAAAGATATCATCGTTC
>XM_043255841.1
CGCAGCGGACTTTTGCCAAACACAAGCTAGTTAGCGTCTAGCGAGCGGCTCACAACGCAGATCAGATGTATTACAGCAACTGTATTAAGCTACTGTTTGCGTCGATGCGACGTCAACTGTACTAACGTCTGCATGGTTGTGCGCGCGAACAAACGTGCTCGTGACACGGTTTGCTAACGTTAGCTGCTCACCGAGCAACTCGGTTGGGAAATGGGAAAAACCGCAAGAAAGGAAAGGGGGCAGCTCAAGCAGGACCAAAGGGCATGCGTCTCCCAGCGCCTCCTCAACCCAGACCTCCTCAACAAGGAGGCTTTCGCGGACCTGCTCCCGGTTTCCAGATGGGCCCCTGACACAGGTTTCCTGCGCCCCATCACGACTTCGGACAGCAGCCCCCCAGAATGAGGATGATGGACGACATGGAAAGAGATCGAGGGTTTATGCAAGAGCCGCAGGGATTCATGGTGAACGACGGGCCTTTTAACCGGATGGATTTCCCCGACAGGCACGAATGTCGCCCTCGCTTTGAGGGACCTGATCCAGCTTTCCGTCATCAAGAGTTTGGAAACAGACCGCCTGCACCAGCTTTACCGTTTTACCGTCCAGAGCTTGAGTATGAACCGCGTTTCCGTTCCCCGGAGTTTTGTGACAGACCTCGAGACTTCTGTCCGCCCGAGTTTAGGGGCAGACCCCCGAACTTCCGCCCTCCTGAGTTTGACGGGGGGCCAGGTTTCCACATGATGAACCCTGCTTTCGACCAAATGGAGCAGTTTGGTCCAAGAGACCAACATTATATGCCGCCAATGGACCCCCATGGCAATCATTCGTttggagagagaggagggttTGCTGCACCGCTGGCACCTGATTTCCGGGGCCCGGGGCCGGTACAGCCACCATCTGAGGCGTTCAGTAGCGCGCCTCGTCCCGCCTGTTCACCCCAACCTCCACAGAAAAAAGATCAGCTGGCTCCGAAAGAGACTGAACCGCCTAAATCGATGGCTTTAAAGATATCATCGTTCAAGAATATCTCTGCAAAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU133820 False 654 TUCP 0.56 3 3207776 3209732
XM_043255841.1 True 1040 mRNA 0.55 3 3207411 3209753

Neighbor

gene id symbol gene type direction distance location
LOC122356067 ppp2r5d,LOC107559765,LOC107696374,LOC106605890 coding upstream 156744 3022616 ~ 3050667 (+)
LOC122356304 LOC107739478,LOC107564218,LOC107728064,LOC107655626,LOC107559768 coding upstream 228162 2971146 ~ 2979249 (+)
LOC122356776 LOC107564218,LOC107739478,LOC107706823 coding upstream 236264 2957658 ~ 2971147 (+)
LOC122357122 cul9,LOC107655624,LOC107669557 coding upstream 255649 2916892 ~ 2951762 (+)
LOC122356236 apmap,LOC107702698,LOC107564208,LOC107717839,LOC107559784 coding upstream 346744 2852563 ~ 2860667 (+)
LOC122356783 LOC107655626,LOC107728064,LOC107564218,LOC107739478,LOC107706823 coding downstream 39 3209792 ~ 3227749 (+)
LOC122356787 LOC107739478,LOC107564218 coding downstream 19360 3229113 ~ 3231423 (+)
znf318 znf318,LOC107739464,LOC107564219,LOC107728066 coding downstream 25290 3235043 ~ 3246109 (+)
tjap1 tjap1,LOC107728071,LOC107559778 coding downstream 110676 3320429 ~ 3398358 (+)
ncoa4 LOC107739471,LOC107669570,LOC107696383,LOC107728073 coding downstream 207781 3417534 ~ 3426736 (+)
G90319 tuba4l,LOC107655627,LOC107559781,LOC107564211,LOC107706828,LOC107669576 non-coding upstream 3392 2857325 ~ 3204019 (+)
G90326 cul9,LOC107736443,LOC107564217,LOC107669557,LOC107683065 non-coding upstream 5924 3199847 ~ 3201487 (+)
LOC122356074 NA non-coding upstream 186520 3020068 ~ 3020891 (+)
G90339 NA non-coding upstream 190191 3016794 ~ 3017220 (+)
LOC122356240 NA non-coding upstream 325725 2865807 ~ 2881686 (+)
LOC122356226 NA non-coding downstream 36510 3246263 ~ 3247132 (+)
G90365 NA non-coding downstream 105910 3315663 ~ 3315908 (+)
G90373 lrrc73,LOC107696385,LOC107728077,LOC107739469 non-coding downstream 192211 3401964 ~ 3403754 (+)
G90378 NA non-coding downstream 240420 3450173 ~ 3450485 (+)
G90381 NA non-coding downstream 259694 3469447 ~ 3489791 (+)
G90324 cul9,LOC107564217,LOC107669557,LOC107559769,LOC107655624,LOC107706827 other upstream 15298 3187826 ~ 3192113 (+)
G90349 NA other upstream 27478 3179427 ~ 3179933 (+)
LOC122356072 znf318,LOC107739464,LOC107564219,LOC107728066 other upstream 196770 2982559 ~ 3010641 (+)
G90230 NA other upstream 737030 2469945 ~ 2470381 (+)
LOC122356772 pim3,LOC107732271 other upstream 922604 2264746 ~ 2284807 (+)
G90343 ppp2r5d,LOC107696374,LOC107559765 other downstream 61572 3271325 ~ 3274372 (+)
G90348 dnph1 other downstream 68084 3277837 ~ 3280997 (+)
G90377 NA other downstream 239648 3449401 ~ 3450017 (+)
prkn park2,LOC107739476,LOC107669573,LOC107696378 other downstream 410653 3620406 ~ 3713763 (+)
pkdcca pkdcca,LOC107669579,LOC107739483,LOC107718010,LOC107695038,LOC107590011,LOC107586469 other downstream 599300 3809053 ~ 3832550 (+)

Expression


Co-expression Network