G90365



Basic Information


Item Value
gene id G90365
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3315663 ~ 3315908 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU133829
CAATAATCCTGAAGGCCTTGATCAGCTTGtccaggtgtgtttgattagagttagCGCTGAACTCTGCGGGAACGTGGACTTTGACTTGAAATCCCCTGTAGTAAACCTCACATAGTGCACCTTTTAAAGAAGGTTAAGTCGTTTGTAGTAGTGTCTGAAAGCATAGTGCGTATTAGTCCACCTAATCTGTAAAACCATTGTACATTAAACAGCTTCTAGATATATCTCATGCtctacaaaataaag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU133829 True 246 lncRNA 0.40 1 3315663 3315908

Neighbor


gene id symbol gene type direction distance location
znf318 znf318,LOC107739464,LOC107564219,LOC107728066 coding upstream 69554 3235043 ~ 3246109 (+)
LOC122356787 LOC107739478,LOC107564218 coding upstream 84240 3229113 ~ 3231423 (+)
LOC122356783 LOC107655626,LOC107728064,LOC107564218,LOC107739478,LOC107706823 coding upstream 87914 3209792 ~ 3227749 (+)
LOC122356067 ppp2r5d,LOC107559765,LOC107696374,LOC106605890 coding upstream 264996 3022616 ~ 3050667 (+)
LOC122356304 LOC107739478,LOC107564218,LOC107728064,LOC107655626,LOC107559768 coding upstream 336414 2971146 ~ 2979249 (+)
tjap1 tjap1,LOC107728071,LOC107559778 coding downstream 4521 3320429 ~ 3398358 (+)
ncoa4 LOC107739471,LOC107669570,LOC107696383,LOC107728073 coding downstream 101626 3417534 ~ 3426736 (+)
LOC122356604 LOC107739472,LOC107565599,LOC107669574 coding downstream 118615 3434523 ~ 3440314 (+)
LOC122356793 LOC107669554,LOC107696371,LOC107578696 coding downstream 397925 3713833 ~ 3717294 (+)
si:ch73-193i2.2 LOC107728794,LOC107590009,LOC107696375,LOC107739482 coding downstream 401388 3717296 ~ 3729468 (+)
LOC122356226 NA non-coding upstream 68531 3246263 ~ 3247132 (+)
G90319 tuba4l,LOC107655627,LOC107559781,LOC107564211,LOC107706828,LOC107669576 non-coding upstream 111644 2857325 ~ 3204019 (+)
G90326 cul9,LOC107736443,LOC107564217,LOC107669557,LOC107683065 non-coding upstream 114176 3199847 ~ 3201487 (+)
LOC122356074 NA non-coding upstream 294772 3020068 ~ 3020891 (+)
G90339 NA non-coding upstream 298443 3016794 ~ 3017220 (+)
G90373 lrrc73,LOC107696385,LOC107728077,LOC107739469 non-coding downstream 86056 3401964 ~ 3403754 (+)
G90378 NA non-coding downstream 134265 3450173 ~ 3450485 (+)
G90381 NA non-coding downstream 153539 3469447 ~ 3489791 (+)
G90388 NA non-coding downstream 186160 3502068 ~ 3543652 (+)
G90514 NA non-coding downstream 253160 3569068 ~ 3569492 (+)
G90350 dlk2,LOC107696386,LOC107669558,LOC107559779,LOC107728069 other upstream 30257 3174735 ~ 3285406 (+)
G90348 dnph1 other upstream 34666 3277837 ~ 3280997 (+)
LOC122356070 dnph1 other upstream 37403 3051982 ~ 3278260 (+)
G90343 ppp2r5d,LOC107696374,LOC107559765 other upstream 41291 3271325 ~ 3274372 (+)
LOC122356782 NA other upstream 105910 3207411 ~ 3209753 (+)
G90377 NA other downstream 133493 3449401 ~ 3450017 (+)
prkn park2,LOC107739476,LOC107669573,LOC107696378 other downstream 304498 3620406 ~ 3713763 (+)
pkdcca pkdcca,LOC107669579,LOC107739483,LOC107718010,LOC107695038,LOC107590011,LOC107586469 other downstream 493145 3809053 ~ 3832550 (+)
G90660 epcam,LOC107699293,LOC107727368,LOC107586477,LOC107707148,LOC107678540,LOC107707150,LOC108422531,LOC107723711 other downstream 866591 4182499 ~ 4353931 (+)
si:ch211-250c4.5 LOC107727386,LOC107699305,LOC107586489,LOC107708409,LOC107678597 other downstream 1245740 4561648 ~ 4695842 (+)

Expression



Co-expression Network