wu:fj16a03


Basic Information

Item Value
gene id wu:fj16a03
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 3951763 ~ 3955955 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU134171
ACGTCGCTATAAAAGAGCAAGCGCTCGGATTCCAGCAGGCATTTCGGAGCAACCAGACAGCGCTGAAACCACATCACAAACCCACAGAGCCAAGATGAAGGCCTGGTTCGTTCTGCTCCTGCTGCTGCCTCTCTGCACGGCGGATCATTTCATTGAGTGCTGCGGTGAAGACTTCCTGATGGTGAGGAACATGCCTCTGCAGTGCAAGAGTAAAGTTCCTCAAGTCTGCTACACTAGAGCAACTGGAGAGAAAGGCTGCGTCAGCGAGGTATTCTGTCAAAAGAAAGGCTGGCAATGTTGTAATGAAAACCGGTGCAACGCTCAATCCTCAAACGGAGTCTGCTAACAGCCAGCTTCGTTCATGCCTCTGTcatctttgttttcattttatatatgattttatatcgCGCCACCAATAccttcaaataaaagaaatctaaTTTTCAGTAATCAGCCTGTGATTTTATGCTTTCAGTCGGCCGTGTTGCCCAAGGTCGATCAGACAACATGTCgcacacaagaaaaaaaaactttgcccTGACcgattatttatttgcacagcGGAGAACAGGCAGTTTTGCTGAGTCAGGAAGAGTCTCTCGGTGAGGCGCTCTGTCGGTTTCACCACAACATAACCTTGCTATCTAACACAGACGGTCGAAATCAATAAAGAACATAAACATCAGTCAAGGTCTGCAGTTTTGCTTGTTTGCCGGTCCAAACTTCAGAGTTTACAGATGCGAAGGGTCAAGGTTCGGCTTGGCGTGACTCCATTGGCCCCCTGCTGGTAGGTCGCGCTGGTTCGCGACTGCACCATCTGGCAGCAAAAAGCTATTTTCTTCTATCTTCATTGACGGTAATTCAGAATTAACCGCGTGTTTTTCgataaaaaggtttttgcaAGCTAGTCTTTGCTAACATTTATGTTCAGTTTAGGGCGACGAAAGAATCCCAGTACTCTCAAGAGCGGCATATAATTGTACTTTAAACACACACGTACGCACAGagagatgaaatgaaatgagtttCTGATAACATCAGTTCATCGATTATTGTGTCCGGAATAGAAAAGAtaggcattttttaaaaagcaattgcTTTGCTGTCTAACTTAAAACTGCTTCGTCTGGCCAAAATCCATGAttcataataatatgtattcTATCGGAAAAGTCCAAATACACCAACATATTTTCTTTAGAACTTTTTGTACTTACATTACACTTATTTCGTTCCATaattatacaaacaaataaatagcacTAATCTACACCTCGAAATGGC
>XM_043255556.1
acGTGACACTGCACCTCCACGTCGCTATAAAAGAGCAAGCGCTCGGATTCCAGCAGGCATTTCGGAGCAACCAGACAGCGCTGAAACCACATCACAAACCCACAGAGCCAAGATGAAGGCCTGGTTCGTTCTGCTCCTGCTGCTGCCTCTCTGCACGGCGGATCATTTCATTGAGTGCTGCGGTGAAGACTTCCTGATGGTGAGGAACATGCCTCTGCAGTGCAAGAGTAAAGTTCCTCAAGTCTGCTACACTAGAGCAACTGGAGAGAAAGGCTGCGTCAGCGAGGTATTCTGTCAAAAGAAAGGCTGGCAATGTTGTAATGAAAACCGGTGCAACGCTCAATCCTCAAACGGAGTCTGCTAACAGCCAGCTTCGTTCATGCCTCTGTcatctttgttttcattttatatatgattttatatcgCGCCACCAATAccttcaaataaaagaaatctaaTTTTCAGTAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106605369 isoform X2

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU134171 True 1284 lncRNA 0.43 3 3951763 3955937
XM_043255556.1 False 468 mRNA 0.47 3 3952597 3955955

Neighbor

gene id symbol gene type direction distance location
prph2b LOC107739477,LOC107586467,LOC107578331,LOC107590000,LOC107669578,LOC107728796,LOC107696376 coding downstream 187162 3761833 ~ 3764601 (-)
qkib qki,LOC107696379,LOC107559772 coding downstream 408087 3482958 ~ 3543676 (-)
LOC122356548 qki,LOC107739475,LOC107559772,LOC107696379,LOC107669572 coding downstream 484706 3454742 ~ 3467057 (-)
yipf3 yipf3,LOC107696384 coding downstream 534831 3412331 ~ 3416932 (-)
lrrc73 lrrc73,LOC107728077,LOC107696385 coding downstream 542118 3401937 ~ 3409645 (-)
LOC122356122 kcng3,LOC107758134,LOC107590001,LOC107756869,LOC107586474,LOC108273984 coding upstream 60078 4016033 ~ 4022400 (-)
haao haao,LOC107586504,LOC107699283,LOC107727361,LOC107590002,LOC107678607,LOC107707146 coding upstream 106517 4062472 ~ 4067606 (-)
LOC122357001 LOC107699293,LOC107586477,LOC107727368,LOC107678540,LOC107707148 coding upstream 285572 4241527 ~ 4244433 (-)
thada thada,LOC107586496,LOC107590015,LOC107707143,LOC107727367,LOC107590014 coding upstream 289776 4245731 ~ 4325475 (-)
epcam epcam,LOC107707150,LOC107727388,LOC107699297 coding upstream 395329 4351284 ~ 4353751 (-)
G90629 LOC107586470,LOC107698167 non-coding downstream 166 3945108 ~ 3951597 (-)
G90632 NA non-coding downstream 7499 3943873 ~ 3944264 (-)
G90631 NA non-coding downstream 8058 3943460 ~ 3943705 (-)
G90627 LOC107590012 non-coding downstream 14551 3936965 ~ 3937212 (-)
G90626 NA non-coding downstream 17313 3934213 ~ 3934450 (-)
G90633 LOC107590022,LOC107586473,LOC107758132,LOC107666233 non-coding upstream 54218 4010173 ~ 4014001 (-)
LOC122356721 NA non-coding upstream 382887 4338842 ~ 4347524 (-)
G90750 NA non-coding upstream 434400 4390355 ~ 4413771 (-)
G90802 epas1,LOC107586486,LOC107727363,LOC107699276,LOC107589559,LOC107708405 non-coding upstream 589066 4545021 ~ 4570758 (-)
G90786 NA non-coding upstream 593156 4549111 ~ 4622804 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other downstream 516183 3422753 ~ 3435580 (-)
dlk2 dlk2,LOC107669558,LOC107696386,LOC107559779,LOC107728069 other downstream 653214 3281337 ~ 3298549 (-)
G90445 znf318,LOC107739464,LOC107655625,LOC107728066,LOC107559766 other downstream 706867 2990418 ~ 3244896 (-)
G90311 polh other downstream 1324606 2626328 ~ 2627157 (-)
G90304 NA other downstream 1366432 2584196 ~ 2585331 (-)
hcar1-3 LOC107590023,LOC107678489,LOC107707144,LOC107699282,LOC107586503,LOC107736563 other upstream 96788 4052743 ~ 4055413 (-)
LOC122356061 LOC107699307,LOC107586507,LOC107708387,LOC108442385,LOC108263686,LOC107727357,LOC106576682,LOC104955882 other upstream 717011 4672966 ~ 4689168 (-)
col13a1 col13a1,LOC107678564,LOC107708413,LOC107589579,LOC107727372,LOC107586491 other upstream 734927 4690882 ~ 4779732 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other upstream 1964547 5920502 ~ 5926677 (-)
gng2 gng2,gbg2,LOC107569409 other upstream 2105730 6061685 ~ 6073197 (-)

Expression


Co-expression Network