G90846


Basic Information

Item Value
gene id G90846
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 4829751 ~ 4833144 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU134515
CGGCGCAGCAGAGTCTCTCAAAACAGTAATACAACTAAACGATTGGATAATGGGTTTTTTGGTATTTCGCTCCACGGTTCCCACCTGCTAAGTACTCGATGACGGCTGCCATGTAGACGGGGGCGCCCATGCCGATGCGATACTTATGGGTTCCTGTGCGCAAGTAACGCATCATCCTCCCGACGGGAAAAATGACCCCTGCCCGGGCAGAACGAGACAGCTTGGTGATCTTCTTCTTTCCTCCTCTGGCTGACATCCTGCCTTttctgtggagaaaaaaaatcaaccgTTTGTCCCGTCGTCGTTTGATCAAGGTAACAATCCTGGTAATGAAAGCGTCAGAGACCGAGCGGGCCCACCTCCTCTTGACTCACAGTGCCACTGGATGGAGTACCTACGGAGAAACCGAAACAAAACCATTGACTCATTAACATCTCTGAATGTGAACTCGACAGACTCCATCTGCTTCGACAGATGACGCTCTCGCGCGCTCCTATAGACGTTAATGACTAGATTAGCCTGGGAAACGAAGCTAATACGTAGACACGTTTAAAAGGTTACGGCTTTCTGGCCACCGTTTAAGCCCTTTTCGATCCATTGACTTTCCCGTCTGGATAACTCTGCAGGTTTGCATGAAGGTATAACCAAAAAAATCCGAACATAACATATCGATCGCTTGGCTGAAATCAAAGAGCACAAGCTTCAAAGCTGCAACGTTGACTGAAAGTGATGGAGATGGAGCATTTAGGCCTGCACGTCTTCAAAACATTAACCTTTGTCGTGCAGCGCGTTGTATTATACGTTAAAACCAAATCCTGAGGGCGACGTAATAACCGTTTTCTTTCGGTATCCAAAGACGATGCTTAAATTGCAGTGAAGAGTGTAAAACTAGTGcttggaaagaaaacaaaaaacaattggGCTGCATCTGAAATCGCAAACTTCCTCACTATGCAGTAAGAAAGCGGTTATCTGTTGCTCCCAGGATTCAGTCAACTTGTAAATTGACGCTGAAAGTCACGTGACACCGACCCCATGTCCTCTAGAAGACATACTCCATTCATACTCCACACATACTACTGTTACACTCGTGCtgtacaaaacacacattttagcGGTCACAAggtaattaattacttattCAAAGTATGCGCTCGAGAGAGTAGCGTTACGCGATTTCGGAAGCAGCCTTGGGCGCCATCTTGTGAAGAAAAGGGATATGAATACTTTAAAGCAGATTTTGACGTAAATATTATGCCTGCAATCAATCGCATGTCCTTTTAAAGAACCCGAAAAGTTGATAATGAAACGTATTTTGCTATATTATGGACctcgttttatatatatatatatatatatatatatattttttaagtaCACTTATAATACTGTACTTTGTTTTAGATCACCTTtgcatcaaatttgaaaaaaaaaaaaaaacaatatagagCAGTGGTATGTTAAATGTAATAGCGTTCTCTTCTGATATAATCTCTCTTCTTTATAATTCCATctcaattctttttttcttttttttttgaaagtcatGAAAACACTCTTGGGAAAAcgggaatgcaaaaaaaaatgtatttgtgtttctGCGATGTGAAAAAGgtccattattattatatattaattacaaaatatacgTTAAGCATAATTTTCTAATagataaaaaagttaaataaaaaggtaaggtaaaaacagcaacaaacgAGCAAGATACAGAATGACTTAAACTGGAGAAAGATACATAAATTGTATATTGGGTTCCTGATTAATAggtttttatgtcttttttttttgcatagccGTTAATTAGCAGGATAACGCAGGCTATctttttttcatgaatgaaaTGTGACCTGGACCCGTTATTCGCAGGTTTCGTGAGATTTATCCACGTAAAACAGTTGAAGCACTGCATGCTATAAGGTGTTTTATGCACGTTGACCGTTGCACacacagtttttattcatttgtttatttagctgACCCAAAAAAAGCCTGAAAACCGGACCGTTTCGCCCAACTGCACAAACATGACCCGGGGTCTGCGACTGTCTGCGCGGCAGCAGCGCGTCCCTCAGCCCGCGGCGACCCCGCGCTGCCATCGCGAATTAAAGGCGCAGCGCGTCTTTTAAGATAAACAGCGGACGTTCATAAACACGGCGCGCGATTCCTCCCCGCTATAAAAAGTTTCGCCTCAAATATGTGCGACAAAAGACCCGCCTCCTGCCAGCAACGGCGCGTTAACACCATTATATTCAGTCGGGATGCGGTACGTGATCGCAAGGCCGTCGCCAAATCCAACGCGTACGATCAAAGGCCTCGCCTTAACTTCGCCGCTTCTCCGCTAAAACGCGCGCGAAAACACGGACACGTCCGTGCAGCAAACGCGTCGTGCACAAATTCGCAATCGTGTTTTTTTAAACCCCGCTCCTCCCACACCAGCTCAccccccattttgttttttttgtttttttttttttttaccccgccgcatttacatacagtaaaacatCGCAAGCGAGTGATGCGTTTCGACGCGACGCGACCGCAACGTTGTTGTTCTAATCGACGCATCCGCGAGCGTTCGGCTTCGTGTTTTTAAAATGCGAACGCCGTCGTTCCGTCGCGCGCGCGCGCCGCGTACGGTGCGTTCGCATGCGTCGCATCGCGCGCTTATCAGCTCGATATCTCGTGCCAATATTTACCTGTTTGTTCTCTACAAATGCGTCATGTACGAAATATATCTGTCCTCTGACAGGCGCGAATAAGGAGGAGTTCCTGGTCTTATTCCTATTCACTGTCCTTGTGCGCCGAGCCTCTGctgttccttaaaaaaaaaaaattacagagagagagagagacacaccgCGAAAAACTACAGCAGCCAGTACCACCGTGCTGTCGATGGAGGCAGGCTTtaggctgctgctgcttctcatttaaaaaacatcgCATTCGAGATATGAAATGCATTACGGCGCGGCCGATGCGACCCGCGCCAAATGCACCTTTAAGCGAATACGGGATGCGTTTGTGTGGGTATCATGCATTTATCGTGATCATTAATTAATTCGCCACAGACAGCTGCAGGTGACTGGGAGATTGACACTTACTGTAAAAATCTCTCTTCACCTGGTCTCTACGCGATGGCGTGCCGATCTTCGTTCATTTTCACCTCTCCTAATGAACTCGGTCGGATGCgcgcttttgaaaaaaaaaattaacctcACGCGCTCCGCTTAAAAATCGGACCTCTTCATTGCGAGTTAGGATGGCCGTGCAGCTGCTCGGTTCTGATATAACGGCCTGTTTCGATGGCGTTTAGCGCCCGCGCAACCCGTGCTAGACCGAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134515 True 3366 lncRNA 0.45 2 4829751 4833144

Neighbor

gene id symbol gene type direction distance location
hells hells,LOC107727385,LOC107586490,LOC107699304,LOC107708407,LOC107678596,LOC107589556 coding downstream 157501 4626388 ~ 4672250 (-)
galm galm,LOC107586487,LOC107699302 coding downstream 218643 4607224 ~ 4611108 (-)
socs5b socs5b,socs5,LOC107727375,LOC107586485,LOC107708402,LOC107699300 coding downstream 357801 4462022 ~ 4471950 (-)
prop1 LOC107727379,LOC107699286,LOC107586498 coding downstream 383463 4441892 ~ 4446288 (-)
ttc7a ttc7a,LOC107586483,LOC107678602 coding downstream 392259 4404523 ~ 4437492 (-)
gbf1 gbf1,LOC107708418 coding upstream 4634 4837778 ~ 4904092 (-)
ninl ninl,LOC107708420,LOC107589549,LOC107699311,LOC107727377,LOC107582480,LOC107678585 coding upstream 98275 4931419 ~ 4955793 (-)
sema4ga sema4ga,LOC107690158,LOC107582524,LOC107733683,LOC107678493,LOC107708465 coding upstream 175428 5008572 ~ 5040509 (-)
slf2 LOC107690156,LOC107582525,LOC107678590,LOC107567840 coding upstream 207420 5040564 ~ 5054042 (-)
wdr32 wdr32,LOC107733687,LOC107582526,LOC107708468,LOC107690155,LOC107678556 coding upstream 231154 5064298 ~ 5070193 (-)
G90842 NA non-coding downstream 78783 4750432 ~ 4750968 (-)
G90786 NA non-coding downstream 206947 4549111 ~ 4622804 (-)
G90785 NA non-coding downstream 244790 4560776 ~ 4584961 (-)
G90802 epas1,LOC107586486,LOC107727363,LOC107699276,LOC107589559,LOC107708405 non-coding downstream 258993 4545021 ~ 4570758 (-)
G90750 NA non-coding downstream 415980 4390355 ~ 4413771 (-)
G91022 NA non-coding upstream 125239 4958383 ~ 4959411 (-)
G91025 NA non-coding upstream 131458 4964602 ~ 4964959 (-)
LOC122356716 NA non-coding upstream 295368 5128512 ~ 5129707 (-)
G91066 NA non-coding upstream 297207 5130351 ~ 5130949 (-)
G91085 NA non-coding upstream 427921 5261065 ~ 5262123 (-)
col13a1 col13a1,LOC107678564,LOC107708413,LOC107589579,LOC107727372,LOC107586491 other downstream 50019 4690882 ~ 4779732 (-)
LOC122356061 LOC107699307,LOC107586507,LOC107708387,LOC108442385,LOC108263686,LOC107727357,LOC106576682,LOC104955882 other downstream 140583 4672966 ~ 4689168 (-)
hcar1-3 LOC107590023,LOC107678489,LOC107707144,LOC107699282,LOC107586503,LOC107736563 other downstream 774338 4052743 ~ 4055413 (-)
wu:fj16a03 NA other downstream 873796 3951763 ~ 3955955 (-)
timm23b timm23b,timm23a,LOC107565600,LOC107669571,LOC107739474,LOC108263229,LOC108426535 other downstream 1394171 3422753 ~ 3435580 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other upstream 1087358 5920502 ~ 5926677 (-)
gng2 gng2,gbg2,LOC107569409 other upstream 1228541 6061685 ~ 6073197 (-)
LOC122356805 LOC107666373,LOC107587882 other upstream 1387031 6220175 ~ 6227272 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other upstream 1525057 6358201 ~ 6396426 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other upstream 1620387 6453531 ~ 6499573 (-)

Expression


Co-expression Network