G90957


Basic Information

Item Value
gene id G90957
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 5397495 ~ 5435571 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU134690
TTCGTTTTACCGTTTAATTATAGACAAAATGTTCTATGTCATTCTTTATGTACACATATAATTACAAGGTCAGTTTAAATGTCCAGGTCgtcatttttttatcttaaagtaGGCAGCTAGTTTAAAGTTTGTTCATGACATTCGCCATCTTACATACAAAAGAAGCTGCAATGCAGTCACATTTCAAAAGCCTGGGATACTCCACCCGCCAAGTGCAGTAAGTCGCTTAACATAGACGGCATTCACATTACTGTCCATCACTATGTACAAAAAACTTGAGTGCACTTGCTGCTACATTATACATATTAACAAACTACAGACTCCATATCTACAGTATCACTGTATACAGATGGTGCGGTCGGTGTGTGAGGAGTACTGTTTGAGGCTTACAGAGAAAAGCAATGTGAGATTTAGCTTCCATCTGAAGGAAGAGAGACCAGCTCCTTTCATTAGACCACTTTGTATGTACGTGTGAGTGCACTTTCCCTTTTGGACCCTAAAAgattgtgagagaaaaaaaaaacgaaaacacaTAAACGGTCTCTCTACGACGTCCCGGCTTACATTCACACCTGATGGGTGTCACAGGACTTGAATTTTCCTATGAGATCACGGACAGATTAGTAACATCCTGTTTAGGCTTTCAATACTAGATGTTTTGTTCTGGTCTAGTGACTTGTCCCTTTATTCATGGCACTTTAAACGCACCGAGAACTGGCGAGCAGGTCATCTGTGCCGTCTCGGTACAGCCGCGCGCCAGGATAATGAAAGATGTAATGACTGCGCCGCTACACACACTTACACCGATTTAGATTTCATAATGTCACATTTCCTCACTCTATCTCTGACCTTTCCTTTGCACTAGGCAATCCACTCCATATCCTGGAGAATACCCCCGGTATCCGACGCAGGTCCAGgtttgtgcatttgtgtatgCAGATAATCCTTCGCCAGCCCAAAATGACATCTGACATTTCGAGAAACCCAAACAAGGTCCTTGTTCGCTCTAATTCCATCCtgctgcctgcctgcctgcagtCACCTTTTATTTCTGCCTTCCTTGAAATGTGCCTGAGAAATGGGTTGAGATTTCAGATAAGAGAGAAGTGAGAGGaagtaaatgataaaagcaGAAGCAGCGGCGGCGCTATCATTATGGCAAACATAAACACTGACGTCTCAGATCTCTACACGAACACGTGAAAGGAGGTAATTCAAAAGAGAATGGAAGGATGCGAAAAAGCTAAAATGTAGAAATCCTCTTATTGGGACAAACATAAAATGCTTGGGAGAGGCGTCACAGATGACCTGTGAATTAAAACGCTTGTAAACATACCAGCTCGCTGTGTTTTATTCCTGCACATCAGAGACGTGATtaattattaagaaataaaagcagttaCTGCCATGATTAAAGAGACATAGACGTACTATAAGCCTCTAAAAGACATCCTGTactatatgcgtgtgtgtgtttagccaTGCAGCCAAAGAAGTCTCCAGAAGaaaaatgtctgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgttgccttcaTCAGAGATGCAGCAGTGCAAGGATTCTTCCTCCTGATTgtaaaaatggaataaaataactgaaataagttaAATATCATAAAGTGGCCCAGGATAAGTCCTTTCAGTCAGGGTCACATAAGAGTTAATTTCCTGTAGTGTTCTCTCACTTTGGGCCAGGAGAGATTCAGGTTCTCTAATCAGAGTCCTCTTGGCTTGTCTAAACCACGCCACCCAGCCATAAGCGTGTGTTCTTGTGACTCTTGTGTCCTGGCAGGGGTCCGAGGTCAGAGGACGAGGGGTAAATGTCAGATGCAGGTGGCGGGCTGTGCTAATGGCTGCTGCTTGCGGCTACGCAACCCTCCCGACTTCTCCTTATATCCCAGACACATCTGCTGAGAGACGTCCACTAATGCACTCGCTACTGCCAG
>TU134692
tgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgccttcaTCAGAGATGCAGCAGTGCAAGGATTCTTCCTCCTGATTgtaaaaatggaataaaataactgaaataagttaAATATCATAAAGTGGCCCAGGATAAGTCCTTTCAGTCAGGGTCACATAAGAGTTAATTTCCTGTAGTGTTCTCTCACTTTGGGCCAGGAGAGATTCAGGTTCTCTAATCAGAGTCCTCTTGGCTTGTCTAAACCACGCCACCCAGCCATAAGCGTGTGTTCTTGTGACTCTTGTGTCCTGGCAGGGGTCCGAGGTCAGAGGACGAGGGGTAAATGTCAGATGCAGGTGGCGGGCTGTGCTAATGGCTGCTGCTTGCGGCTACGCAACCCTCCCGACTTCTCCTTATATCCCAGACACATCTGCTGAGAGACGTCCACTAATGCACTCGCTACTGCCAG

Function

GO:

id name namespace
GO:0019900 kinase binding molecular_function
GO:0019901 protein kinase binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU134690 True 1969 lncRNA 0.43 2 5433582 5435571
TU134692 False 490 lncRNA 0.49 3 5397495 5435571

Neighbor

gene id symbol gene type direction distance location
cdc25b LOC107690144,LOC107733779,LOC107582534,LOC107567856,LOC107718443,LOC107678573 coding upstream 138286 5252901 ~ 5259209 (+)
sfxn5a sfxn5a,sfxn5,LOC107567846,LOC107733701,LOC107690191,LOC108262907,LOC100691010 coding upstream 184631 5198874 ~ 5212864 (+)
LOC122356791 LOC107733689,LOC107690150,LOC107582530,LOC107708385,LOC107678491,LOC106918274,LOC103144266 coding upstream 261265 5132489 ~ 5136230 (+)
mrps26 LOC107678578,LOC107690153,LOC107582565,LOC107733693,LOC107708396,LOC107567847 coding upstream 266048 5129847 ~ 5131447 (+)
si:dkey-33c12.3 si:dkey-33c12.3,LOC107582528,LOC107733690,LOC107690152,LOC107567853,LOC107678577 coding upstream 268638 5125547 ~ 5128857 (+)
ky LOC107666377,LOC107747591,LOC107556906,LOC107733664,LOC107695013,LOC107568638 coding downstream 131931 5567502 ~ 5574433 (+)
fgfr3 fgfr3,LOC107733743,LOC107666479,LOC107556915 coding downstream 272950 5708521 ~ 5740890 (+)
nsd2 LOC107747575,LOC107666517,LOC107556918,LOC107733764 coding downstream 359669 5795240 ~ 5807876 (+)
lrit3b lrit3b,LOC107556923,LOC107666384 coding downstream 494626 5930197 ~ 5935584 (+)
LOC122357047 enpep,LOC107747565,LOC107666571,LOC107585235,LOC107667073,LOC107733706 coding downstream 500830 5936401 ~ 5946902 (+)
G90905 NA non-coding upstream 361379 5035359 ~ 5036116 (+)
G90879 LOC107733683,LOC107690158,LOC107582524,LOC107678493,LOC107708465 non-coding upstream 383833 5003410 ~ 5013662 (+)
G90888 NA non-coding upstream 432480 4964702 ~ 4965015 (+)
G90700 NA non-coding upstream 925751 4471065 ~ 4471744 (+)
G90659 socs5b,socs5,LOC107727375,LOC107586485,LOC107699300,LOC107708402 non-coding upstream 931627 4459639 ~ 4465868 (+)
G90985 NA non-coding downstream 66071 5501642 ~ 5505510 (+)
G90997 NA non-coding downstream 88174 5523745 ~ 5525112 (+)
G91003 LOC107556907,LOC107666376 non-coding downstream 104921 5540492 ~ 5597345 (+)
G91124 NA non-coding downstream 329135 5764706 ~ 5765211 (+)
G91126 NA non-coding downstream 332603 5768174 ~ 5768524 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other upstream 126248 5261036 ~ 5271247 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other upstream 199091 5177718 ~ 5198404 (+)
si:ch73-49p17.1 LOC107678601,LOC107727381,LOC107589548,LOC107708422 other upstream 399504 4992153 ~ 4997991 (+)
si:ch211-250c4.5 LOC107727386,LOC107699305,LOC107586489,LOC107708409,LOC107678597 other upstream 701653 4561648 ~ 4695842 (+)
G90660 epcam,LOC107699293,LOC107727368,LOC107586477,LOC107707148,LOC107678540,LOC107707150,LOC108422531,LOC107723711 other upstream 1043564 4182499 ~ 4353931 (+)
lamtor3 lamtor3 other downstream 515646 5951217 ~ 5952517 (+)
commd8 commd8,LOC107666485,LOC107556927,LOC107733703,LOC107585230 other downstream 546947 5982518 ~ 5986979 (+)
akt3a akt3a,akt3,LOC107587843,LOC107666464,LOC107585250,LOC107666430,LOC103024575,LOC108422057,LOC106589689 other downstream 819032 6254603 ~ 6358017 (+)
LOC122356719 LOC107585299,LOC107733725,LOC107698728,LOC107711427,LOC107666365,LOC107711426,LOC107585285,LOC107733707 other downstream 1657573 7093144 ~ 7147218 (+)
sh2d4ba sh2d4ba,LOC107713884,LOC107666399,LOC107565924,LOC107743625,LOC107696870 other downstream 2335989 7771560 ~ 7787307 (+)

Expression


Co-expression Network