G91178


Basic Information

Item Value
gene id G91178
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 5924540 ~ 5926325 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU135044
AAActgaatcaataaaaataaaaatgtaaccatTCTCCATTGAATTTCCAGCAAATACAGCGATGGTCATATCACCCAGCTGATTAATGACATCAGCCatgcagaaacagacagagcCATGCTactacacagacacactcttGCTCACAAAAATACACTCATACACCCACTGCGGAACAAACTGCTCCCTGTAATACTGTTAGAACAAGAGGACATCACCGGCCGGACACACATGGGAAGCGGCGGGACTTCGTACCTGCCAACAACCCAACCTCTGCAGCtgcagagagcgagagaagagCTTCAGACACACACTGCAGCAGCCCACCCCCcaacgcgcgcgcacacacacacacacacacacggaggtAAATGGAAACGTGTATAAGGTGACTTCAggaccatcacacacacacacgctctcacaaaGAAGTCCTAAAGATAAGCACGCACTCCTGACCTAACCACTGGATGCTTTTGAAGACATTAGGCTTTTTCAATTCATCACTATTCTACTGTTTGAAAGCCGGGGCCTGGAGACTCAAGGATGAGCTAATAACAAAGGAATGAAAGGCTGTAACTACAGGAGCCTAATAGCAACTAATCACCACCATAATGGTTACTTACGGGAAGACTCTGCGGCATCCATTAATGAAGGACAAATAAGCATTTATTCACAAAACAGTGATTCATGAGAGATGTTTCTAtactaaaaaaaagtgtgcaatcTCTCTTCAATACAAAGACATGTGTACTATCATGTGAAACATCCTTCCATCACGAGTGTCATTTACAGGGCCCCAAAAAGTATtgacatgaatgcattttaccTTCTCTAAGAACGTCACATTTCTCACAGTTCACAGACACACTAGCAGAATAACTAGCAGGTTAGTGATAATCTGtcttgaaaatatatacatacactaatGTTTAAAGTTTCTAGtcagaaagaaatgtattattttattcagtaaacatgcattaaattaaagtaaaatgacaaagacattttttgtgTTAGAGAagatctataaaaaaaaaagttgcatcactgtttccacaaaacGTAAGCATTACTGTTTTGAACATTGATCATAATAACACCACTTCTGAGGAATCATGTGACCATTATTAGTCAGTTTACGTTAAATATAAGCTAATAAAATTAGAAGAATCATTCTCGAGTTTCAATCGggcaaagtaaaaaaacattttaaactagcTAGAAGACTGATcagctatattattattattaataatgagaACATACAGAATACGGGTTGAAATACCTTCTGAATTCTCATGGgggagaaatattttttaatctaatctaaatttaagacagtttttttgtttttactacttaaatatttaatttgcttgATTCAGACAAGGGGAAAAAACGTATTCACAAACAAATTCTCAAACCTCCTGAAGTTAAATGAAGCTGATTAAATAGGACTCGTGAATCATACAGTAGGTGTGGATCATGTGTCCTTGCACTTTCTAGGgccacatacagtatataacatcatatgaaactttttattaatgatgTGTATCCAACTAACTaccaagtaaataaaataagatgaaaCAAACCATAAAGCGTTTTTCATAATCAAATGATTATAagagcataaaaatacaaaaatgatgatgatgataaatacTCATCAAACAAGATACCAAACAAAAACTGTAACTGTAAACAGAGGTTACATCTAGatgcacatttacataaacTGTGGTTAATCTGGTCCAAAGTGTGCTTCTGCAGCAA

Function

NR:

description
transmembrane protein 56-B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135044 True 1786 lncRNA 0.36 1 5924540 5926325

Neighbor

gene id symbol gene type direction distance location
nsd2 LOC107747575,LOC107666517,LOC107556918,LOC107733764 coding upstream 116664 5795240 ~ 5807876 (+)
fgfr3 fgfr3,LOC107733743,LOC107666479,LOC107556915 coding upstream 183650 5708521 ~ 5740890 (+)
ky LOC107666377,LOC107747591,LOC107556906,LOC107733664,LOC107695013,LOC107568638 coding upstream 350107 5567502 ~ 5574433 (+)
gfra4a gfra4a,gfra4,LOC107693311,LOC107747595,LOC107695017,LOC107568637,LOC107733662 coding upstream 493192 5344526 ~ 5431348 (+)
cdc25b LOC107690144,LOC107733779,LOC107582534,LOC107567856,LOC107718443,LOC107678573 coding upstream 665331 5252901 ~ 5259209 (+)
lrit3b lrit3b,LOC107556923,LOC107666384 coding downstream 3872 5930197 ~ 5935584 (+)
LOC122357047 enpep,LOC107747565,LOC107666571,LOC107585235,LOC107667073,LOC107733706 coding downstream 10076 5936401 ~ 5946902 (+)
pprc1 pprc1,LOC107666421,LOC107747555,LOC107569410,LOC107667059,LOC107733763,LOC107585240 coding downstream 151892 6078217 ~ 6087501 (+)
oga mgea5,LOC107666422,LOC107585241,LOC107667060 coding downstream 162627 6088952 ~ 6101193 (+)
npm3 npm3,LOC107666424,LOC107569414,LOC107747554,LOC107667062,LOC107585242,LOC107733732 coding downstream 175306 6101631 ~ 6103986 (+)
G91174 LOC107666555,LOC107747569,LOC107556920,LOC107733787,LOC107585221,LOC107695029 non-coding upstream 47801 5873007 ~ 5876739 (+)
G91127 NA non-coding upstream 155022 5769290 ~ 5769518 (+)
G91126 NA non-coding upstream 156016 5768174 ~ 5768524 (+)
G91124 NA non-coding upstream 159329 5764706 ~ 5765211 (+)
G91003 LOC107556907,LOC107666376 non-coding upstream 327195 5540492 ~ 5597345 (+)
G91179 NA non-coding downstream 33 5926358 ~ 5926748 (+)
G91180 NA non-coding downstream 1509 5927834 ~ 5928133 (+)
G91172 NA non-coding downstream 28566 5954891 ~ 5956598 (+)
G91250 gabrb1,LOC106937613 non-coding downstream 72117 5998442 ~ 6002062 (+)
G91324 NA non-coding downstream 443885 6370210 ~ 6370528 (+)
ap5s1 ap5s1,LOC107693289,LOC107678575,LOC107718444,LOC107567857,LOC107582535,LOC107733789 other upstream 653293 5261036 ~ 5271247 (+)
rab11fip5a LOC107733767,LOC107690145,LOC107582533 other upstream 726136 5177718 ~ 5198404 (+)
si:ch73-49p17.1 LOC107678601,LOC107727381,LOC107589548,LOC107708422 other upstream 926549 4992153 ~ 4997991 (+)
si:ch211-250c4.5 LOC107727386,LOC107699305,LOC107586489,LOC107708409,LOC107678597 other upstream 1228698 4561648 ~ 4695842 (+)
G90660 epcam,LOC107699293,LOC107727368,LOC107586477,LOC107707148,LOC107678540,LOC107707150,LOC108422531,LOC107723711 other upstream 1570609 4182499 ~ 4353931 (+)
lamtor3 lamtor3 other downstream 24892 5951217 ~ 5952517 (+)
commd8 commd8,LOC107666485,LOC107556927,LOC107733703,LOC107585230 other downstream 56193 5982518 ~ 5986979 (+)
akt3a akt3a,akt3,LOC107587843,LOC107666464,LOC107585250,LOC107666430,LOC103024575,LOC108422057,LOC106589689 other downstream 328278 6254603 ~ 6358017 (+)
LOC122356719 LOC107585299,LOC107733725,LOC107698728,LOC107711427,LOC107666365,LOC107711426,LOC107585285,LOC107733707 other downstream 1166819 7093144 ~ 7147218 (+)
sh2d4ba sh2d4ba,LOC107713884,LOC107666399,LOC107565924,LOC107743625,LOC107696870 other downstream 1845235 7771560 ~ 7787307 (+)

Expression


Co-expression Network