G3612


Basic Information

Item Value
gene id G3612
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 5368834 ~ 5369510 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU4019
ACACCATGAAAAGAGCGCCAGCAGTAGTCCTGAGCAAGTTTCTTGGCCTCACTCATGGGTACCTGTGGGGTTGGTTGTGGCACAGTTGGTGTAGGTGTAGGTGTAATAATTTCCCTCTGAATGGTGGATTTGAGAGCATTGGGTTGATTCGGTTTGTCCTGAGCAGCTTCGCCTGATTGTGTTTTTAATTGTGGTCTAGTAGGCTTTGGCCTCTGCTCTTGTCGTCTTTGTTGTGGTCTCATTGTCTGGGTTGTGACAGGGGCTGTTGAAGATTCAGATCTGAAGACCATCTGAGCCTCGTCGGATGCTCTCTTGCACATCTGAGGCTTTATGACGCGTCGGCCTTGGCAAGCATTCTGTAACTTGCGGAGGTCCCACATGATCTGCTTGTAATAATGTACTGGATTTTTTTTGTAAGAGCGGCAGACATGAGGCTTGCCCTGGTACTCACACCAGTACGAATGTTCCAGGCCCTGGCAAGTGATGCGGAGCTTAATCAGATCTCTTTGTCCTATCACGCTCATGTAGCATTCATCTTTGGTGCCTCTGGTAAGAAACTCAATCACATCTTTCCAAACGTTCCTCCTGCCTCCTGGTTCATCATCATCGTGACCCTGGGTTTGAGCGAGAGCTGCCTGGAGGCAGCATGTTAGCAGGAGTGTGCTTGTGATTGTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4019 True 677 lncRNA 0.42 1 5368834 5369510

Neighbor

gene id symbol gene type direction distance location
CI01000000_05311908_05314253 NA coding downstream 54578 5310741 ~ 5314256 (-)
CI01000000_05286804_05288152 NA coding downstream 80620 5286788 ~ 5288214 (-)
CI01000000_04986976_04998622 NA coding downstream 369815 4986709 ~ 4999019 (-)
CI01000000_04924131_04926561 NA coding downstream 442068 4924058 ~ 4926766 (-)
CI01000000_04728056_04730605 NA coding downstream 638063 4727845 ~ 4730771 (-)
CI01000000_05380329_05386853 ANXA5A coding upstream 10545 5380055 ~ 5386853 (-)
CI01000000_05409025_05413963 TMEM33.L, TMEM33 coding upstream 38729 5408239 ~ 5414411 (-)
CI01000000_05422567_05424822 CRYBA1L1 coding upstream 52736 5422246 ~ 5425430 (-)
CI01000000_05431517_05435978 CABP2B, CABP2 coding upstream 62007 5431517 ~ 5435978 (-)
CI01000000_05465020_05466303 NA coding upstream 95134 5464058 ~ 5466516 (-)
G3586 NA non-coding downstream 22489 5329960 ~ 5346345 (-)
G3467 NA non-coding downstream 90986 5272812 ~ 5277848 (-)
G3478 NA non-coding downstream 173604 5194958 ~ 5195230 (-)
G3476 NA non-coding downstream 175683 5192675 ~ 5193151 (-)
G3477 NA non-coding downstream 176788 5191843 ~ 5192046 (-)
G3613 NA non-coding upstream 168 5369678 ~ 5370563 (-)
G3614 NA non-coding upstream 2738 5372248 ~ 5373134 (-)
G3615 NA non-coding upstream 4497 5374007 ~ 5374347 (-)
G3616 NA non-coding upstream 6703 5376213 ~ 5376514 (-)
G3627 NA non-coding upstream 24173 5393683 ~ 5394503 (-)
G2730 NA other downstream 978682 4386383 ~ 4390152 (-)
CI01000000_04079738_04081018 MIF other downstream 1287717 4078121 ~ 4081117 (-)
G2484 NA other downstream 1795280 3570066 ~ 3573554 (-)
CI01000000_03564077_03564373 NA other downstream 1801743 3562887 ~ 3567571 (-)
CI01000000_03245643_03246684 NA other downstream 2122119 3245134 ~ 3246721 (-)
G3650 NA other upstream 170953 5540463 ~ 5540881 (-)
G3716 NA other upstream 630897 6000407 ~ 6000769 (-)
G3931 NA other upstream 787503 6157013 ~ 6403525 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 other upstream 5034818 10407395 ~ 10409950 (-)

Expression


Co-expression Network