G91395 (LOC107666411)


Basic Information

Item Value
gene id G91395
gene name LOC107666411
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 6183634 ~ 6183997 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU135382
TCCTCCACAGGGATCTTGACAGAAATGAACACActttttatcatcttttttaGCATGACATGACACCATTGTTtctatgtgcatatttaaacacCATGAAATCGATCAGCCTGGCAGGAAGTGAAGGCTGCTCAAACTCCTCCTCCTTTTCTAATACGACGCTGTCATACAGCTGATGAGCGTCGGCTTGGACCATAGAGGTGAAAAGCACCACTCTGTTTGCATTATGTCTGGCAACAAATTCCAAAGCAGTTTTACAAAGAGCTTTTGCAAGGCCACCACCCCGAAACTTCTTTTTCACAGAGATCCTCTTTAGTTCCCAAGCACCTGGCTCCTCCACTCAGGGCAGAACGCCCGCCGTCCC

Function

NR:

description
PREDICTED: probable N-acetyltransferase CML5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135382 True 364 lncRNA 0.46 1 6183634 6183997

Neighbor

gene id symbol gene type direction distance location
sufu sufu,LOC107666454,LOC107667077 coding downstream 37603 6134613 ~ 6146031 (-)
trim8a trim8a,LOC107666453,LOC107747550,LOC107667064,LOC107733745,LOC108421648 coding downstream 49698 6115706 ~ 6133936 (-)
gabra2a si:dkey-52k1.6,gabra2,LOC107747556,LOC107666515,LOC107569424,LOC108262858 coding downstream 124490 6045262 ~ 6059144 (-)
gabrg1 si:dkey-155h10.3,gabrg1,LOC107747559,LOC107666522,LOC107667066,LOC107585224,LOC107569420,LOC107733747 coding downstream 143725 6029208 ~ 6039909 (-)
gabrb1 gabrb1,LOC107747557,LOC107666521,LOC107733746,LOC107585222,LOC107667065 coding downstream 174104 5987132 ~ 6009530 (-)
desi2 desi2,LOC107587845,LOC107747542,LOC101155051,LOC107089908 coding upstream 28544 6212541 ~ 6219756 (-)
zbtb18 LOC107587843,LOC107666464,LOC107747541,LOC107585250,LOC107733762,LOC107698757 coding upstream 70600 6254597 ~ 6263995 (-)
dync2li1 dync2li1,LOC107666473,LOC107698753,LOC107585292,LOC107747586 coding upstream 245385 6429382 ~ 6433028 (-)
abcg5 abcg5,LOC107747536,LOC107733783 coding upstream 249480 6433477 ~ 6444448 (-)
prepl prepl coding upstream 369491 6553488 ~ 6560661 (-)
G91364 NA non-coding downstream 82451 6099268 ~ 6101183 (-)
LOC122356110 NA non-coding downstream 254143 5926993 ~ 5929491 (-)
G91210 fgfr3,LOC107733743,LOC108263592 non-coding downstream 450956 5731256 ~ 5732678 (-)
G91085 NA non-coding downstream 921511 5261065 ~ 5262123 (-)
G91066 NA non-coding downstream 1052685 5130351 ~ 5130949 (-)
G91406 NA non-coding upstream 22097 6206094 ~ 6207963 (-)
G91420 NA non-coding upstream 106884 6290881 ~ 6292203 (-)
G91454 NA non-coding upstream 262501 6446498 ~ 6448426 (-)
G91459 ppm1b,LOC107582773,LOC107700122,LOC107749348,LOC107698817,LOC107550052,LOC105904124 non-coding upstream 352604 6536601 ~ 6538368 (-)
G91490 NA non-coding upstream 503080 6687077 ~ 6687295 (-)
gng2 gng2,gbg2,LOC107569409 other downstream 110437 6061685 ~ 6073197 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other downstream 256957 5920502 ~ 5926677 (-)
col13a1 col13a1,LOC107678564,LOC107708413,LOC107589579,LOC107727372,LOC107586491 other downstream 1403902 4690882 ~ 4779732 (-)
LOC122356061 LOC107699307,LOC107586507,LOC107708387,LOC108442385,LOC108263686,LOC107727357,LOC106576682,LOC104955882 other downstream 1494466 4672966 ~ 4689168 (-)
hcar1-3 LOC107590023,LOC107678489,LOC107707144,LOC107699282,LOC107586503,LOC107736563 other downstream 2128221 4052743 ~ 4055413 (-)
LOC122356805 LOC107666373,LOC107587882 other upstream 36178 6220175 ~ 6227272 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other upstream 174204 6358201 ~ 6396426 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other upstream 269534 6453531 ~ 6499573 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other upstream 1625852 7809849 ~ 7816379 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other upstream 1859568 8043565 ~ 8047901 (-)

Expression


Co-expression Network