G91454


Basic Information

Item Value
gene id G91454
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 6446498 ~ 6448426 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU135466
TTGATTAGGATGGTGAACTGTTGCAGTTTTCCAGGCAGGCGATCCTTCTTTTTGCAAACTGTGATCGCTGATTCCTTGTTCGGGACGGGAGGAACACTGCAGGTGTACAAACTTTATCATCAGCTTTTCACTTTCGTTCATACGGCATGAGAGCTCTTTAGAAAACTTTCAAGAAAAAGCCTCAGTGTGAAAGAACAGATACCAATATGGTTATTGAAATGTACCTTTGCGGGGCATCCAGCGCCGGGAAACCCCCATCTTCTGATTTCCACATGAAATCCTCTGTGTTCTTCACCTTTTCTACAAACTGGGCCGCTAGCACCCTGGCTTTCTCCAAACACTGCGCTTCCTTTTCAGGACTGCGCCGATCGATGCTTATCAAGTCCACTGCATGAGAAGTTCACAGTTCAGAGACAACTCGACCACACTTGCTCATGCTGTGGACATCGGTCTCTGCCCAACTCACCGTAGTAGTCAGACGGGTTGCAGTATCGCGGACATGGGTATCCGAGAGAAGTAAAGTAAGGTACCATGTGCTGGGCATGACCGCAGTACACAGCTGTGCCAGAAGACAGGAGCACCACCAGGTCAAAGAGCTGAAAGATATCTGAACGAGGCTGATGGACTGACAGCAACACCAGCCGGTTCCCTCGAGCCAGACGGTACAATGTAATGACCAAATTATGGGCTGTGAAACTGTCCAGACCCGAAGTAGGCTCATCTAGGATGAGAATACCTGAAAAAACATATAAAGCAAAAGCAAAGGACTCACCTGGATTCCAGAGCAGCTGCACGGCGATGCTGaccctcctcctctctccgCCGGACACGCCCCTCACGTACTCGTTCCCGACGCGCGTGTGCGCGCACTGCCTCAGGCGCAGCTCCGCGATGACGTCGTCCACCTGCGCGGGTCAGACACACAGTCAGGCGCGCTCGCGGGACCTTTGACTAGTCGTGCCGTCTGAGCTGCTCACCCGTTGATCTCTCTGCTGCTGGGTGAAGTGCGCAGGCAGCCGCAGCTTGGCCACAAACGCCAGCGTCTCTCGCACCGTGAGATGCGGCAAGAGACGGTCGTCCTGCCGCACGTGCGCAATGCATTTCTTCACCAGGGAACGTGTCGAGGGTTTCCCGTTGATCAGAATCTCTCCCGACTTCGTCGTGCCGCCCTCATCTCGACACGTTATGATGTCCAGTAAGGAGG

Function

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process

KEGG:

id description
ko00830 Retinol metabolism
ko04146 Peroxisome
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU135466 True 1204 lncRNA 0.53 2 6446498 6448426

Neighbor

gene id symbol gene type direction distance location
abcg5 abcg5,LOC107747536,LOC107733783 coding downstream 2050 6433477 ~ 6444448 (-)
dync2li1 dync2li1,LOC107666473,LOC107698753,LOC107585292,LOC107747586 coding downstream 13470 6429382 ~ 6433028 (-)
zbtb18 LOC107587843,LOC107666464,LOC107747541,LOC107585250,LOC107733762,LOC107698757 coding downstream 182503 6254597 ~ 6263995 (-)
desi2 desi2,LOC107587845,LOC107747542,LOC101155051,LOC107089908 coding downstream 226742 6212541 ~ 6219756 (-)
sufu sufu,LOC107666454,LOC107667077 coding downstream 300467 6134613 ~ 6146031 (-)
prepl prepl coding upstream 105062 6553488 ~ 6560661 (-)
six2a six2a,six2,LOC107666385,LOC107711421,LOC107602488,LOC107602487,LOC107733704 coding upstream 271635 6720061 ~ 6722866 (-)
srbd1 LOC107711437,LOC107666540,LOC107585258,LOC107733719,LOC107698739 coding upstream 340406 6788832 ~ 6840561 (-)
prdx3 prdx3,LOC107733724,LOC107666469 coding upstream 412862 6861288 ~ 6863797 (-)
dennd10 fam45a,LOC107711433,LOC107733722,LOC107585262,LOC107602482 coding upstream 419272 6867698 ~ 6871804 (-)
G91420 NA non-coding downstream 154295 6290881 ~ 6292203 (-)
G91406 NA non-coding downstream 238535 6206094 ~ 6207963 (-)
G91395 LOC107666411 non-coding downstream 262501 6183634 ~ 6183997 (-)
G91364 NA non-coding downstream 345315 6099268 ~ 6101183 (-)
LOC122356110 NA non-coding downstream 517007 5926993 ~ 5929491 (-)
G91459 ppm1b,LOC107582773,LOC107700122,LOC107749348,LOC107698817,LOC107550052,LOC105904124 non-coding upstream 88175 6536601 ~ 6538368 (-)
G91490 NA non-coding upstream 238651 6687077 ~ 6687295 (-)
LOC122357105 NA non-coding upstream 245236 6693662 ~ 6703923 (-)
G91513 NA non-coding upstream 338841 6787267 ~ 6787607 (-)
G91574 eif3a,LOC107666466 non-coding upstream 430796 6879222 ~ 6879894 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 50072 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 219226 6220175 ~ 6227272 (-)
gng2 gng2,gbg2,LOC107569409 other downstream 373301 6061685 ~ 6073197 (-)
metap1 metap1,LOC107556924,LOC107733733,LOC107695030 other downstream 519821 5920502 ~ 5926677 (-)
col13a1 col13a1,LOC107678564,LOC107708413,LOC107589579,LOC107727372,LOC107586491 other downstream 1666766 4690882 ~ 4779732 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other upstream 5105 6453531 ~ 6499573 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other upstream 1361423 7809849 ~ 7816379 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other upstream 1595139 8043565 ~ 8047901 (-)
G92267 NA other upstream 2666667 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 3725987 10174413 ~ 10191766 (-)

Expression


Co-expression Network