G91843


Basic Information

Item Value
gene id G91843
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8305568 ~ 8308919 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU135971
CCTAAATGCATTACAGAGAAACATTTGATTATATTGCAGAGTAACACATGAATAACTAGTCTATACATTGTGAAGAGAAGACTGTCTTATGTAGTGTAATACTTACATTCTCTATGAGACATATTGCAGCAGGATTACCTTTAAAAGGCACATTAGTAAAAGCATCAACAGTAAATATTGGAATCTCCATTGATTACAGCTCTTCagctctgtttttttcttcGATGTTTTGAGTATTTTTAGTGCTGTATTTGAGACCGAGGTAGACTTTGACCCTGATGACATAGCAGCTCACTTCAACTTTAAAGGTACAGGCTCAAGAtttagaaaagtatttttactgtgaTGTGATCCATAAAATAGAGTGGATGAGATAATAATGgaaatttgttattatataagaaaaaaagttatcagtgtctctgtgtgtcactgtagcaccattttggagaatatcgaCTGCATGTAAACTGTATGCTCTTCTGTATCAGCCGCAACACAGGGATACGTTTTCCATGTGTATgtatgctttgatttgaacgGAAA

Function

GO:

id name namespace
GO:0006898 receptor-mediated endocytosis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU135971 True 546 lncRNA 0.35 2 8305568 8308919

Neighbor

gene id symbol gene type direction distance location
dna2 LOC107601824,LOC107666538,LOC107725437,LOC107676588,LOC107563052,LOC107743557,LOC107601826 coding upstream 4823 8291171 ~ 8300745 (+)
nfkb2 LOC107725448,LOC107601822,LOC107666457,LOC107743559,LOC107563053,LOC107696896 coding upstream 49470 8238414 ~ 8256098 (+)
zgc:193505 NA coding upstream 80317 8223770 ~ 8225251 (+)
sncga sncga,LOC107601819,LOC107666408,LOC107725452,LOC107743564,LOC107563049,LOC108438198 coding upstream 82941 8215939 ~ 8222627 (+)
bmpr1aa bmpr1aa,LOC107743563,LOC107666410,LOC107696892,LOC107706029,LOC107563048 coding upstream 114476 8171771 ~ 8191092 (+)
hnrnph3 hnrnph3,LOC107563056,LOC107601829,LOC107725497,LOC108438202,LOC107666547 coding downstream 10579 8319498 ~ 8324207 (+)
tacr2 tacr2,LOC107725458,LOC107601831,LOC107743552,LOC107563044,LOC107666460 coding downstream 54078 8362997 ~ 8368788 (+)
pik3ap1 LOC107601836,LOC107725474,LOC107666502,LOC107563065,LOC107676601 coding downstream 113028 8421947 ~ 8435924 (+)
LOC122356333 LOC107601782,LOC107666363,LOC107725459,LOC107563040 coding downstream 127701 8436620 ~ 8479074 (+)
khdrbs2 khdrbs2,LOC107743545,LOC107666564,LOC107676606,LOC108443734 coding downstream 192540 8501459 ~ 8555403 (+)
G91842 NA non-coding upstream 188 8304948 ~ 8305380 (+)
G91829 si:ch211-150i13.1,LOC107725451,LOC107743558,LOC107563050,LOC107696897 non-coding upstream 22981 8282155 ~ 8282587 (+)
G91828 LOC107725451,LOC107743558,LOC107696897,LOC107601823 non-coding upstream 23567 8281571 ~ 8282001 (+)
G91826 NA non-coding upstream 34174 8271162 ~ 8271394 (+)
G91825 NA non-coding upstream 35987 8269311 ~ 8269581 (+)
G91836 NA non-coding downstream 359 8309278 ~ 8315456 (+)
G91839 NA non-coding downstream 4195 8313114 ~ 8316412 (+)
LOC122356687 NA non-coding downstream 27376 8336295 ~ 8338716 (+)
G91855 NA non-coding downstream 34205 8343124 ~ 8347157 (+)
G91867 NA non-coding downstream 76949 8385868 ~ 8386384 (+)
zswim8 LOC107666425,LOC107565928,LOC107713895,LOC107743573 other upstream 418878 7858698 ~ 7886690 (+)
chchd1 LOC107713887,LOC107565922,LOC107743624,LOC107696882,LOC107666381,LOC107555316 other upstream 466623 7836180 ~ 7838945 (+)
sh2d4ba sh2d4ba,LOC107713884,LOC107666399,LOC107565924,LOC107743625,LOC107696870 other upstream 518261 7771560 ~ 7787307 (+)
LOC122356719 LOC107585299,LOC107733725,LOC107698728,LOC107711427,LOC107666365,LOC107711426,LOC107585285,LOC107733707 other upstream 1158350 7093144 ~ 7147218 (+)
akt3a akt3a,akt3,LOC107587843,LOC107666464,LOC107585250,LOC107666430,LOC103024575,LOC108422057,LOC106589689 other upstream 1947551 6254603 ~ 6358017 (+)
pcnx2 pcnxl2,LOC107725461,LOC107601842,LOC107743596,LOC107666362,LOC107676602,LOC107552953 other downstream 357348 8666267 ~ 8683052 (+)
sf3b5 sf3b5,LOC107601807 other downstream 430117 8739036 ~ 8740095 (+)
fuom fuom,LOC107676595,LOC107666397,LOC107601808 other downstream 717024 9025943 ~ 9027909 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other downstream 771929 9080848 ~ 9089121 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other downstream 852598 9161517 ~ 9164114 (+)

Expression


Co-expression Network