G91967 (LOC107743599,LOC107601782,LOC107725459,LOC107666363)


Basic Information

Item Value
gene id G91967
gene name LOC107743599,LOC107601782,LOC107725459,LOC107666363
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8465081 ~ 8468983 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU136183
TGGGTAATATGTTAAAAAGGTCATGAAAAAAGTAGAAgtctgagaataaaaaaaagtgaaatgacacacatttacactacacaaaagaaatgtataatatgCCAATCTGATCACAAACCACACAAAGTCGGCACACGGCAGTAATGGATAAAGTAAAGTCACTCGGTGATAGCAGACAGGAGAAAGAAAGGCTGGAGGAAGATGAGTGATCACAGACATTGTCATGCCCGGACATGAGTGTGGACAATCTGACACTCATGACACTCTCAATATAGCCACCTTCAGAGTGATCTTTACTGGCTTCTGAGCCCTCCACATCCATGAGGTCATCTGAGTTGCACCCCTCACAGGGAGAGCTGTCTCCATTACTGAGCCTCTCCAGCACCTCCAAAGAGGACAGGCGCTGGGGAATCAAAGGCTTCAGCTTGGCCGAGATGACATCTCCGGTCACAGGCTTCATGGCAGAGAGAGCGCAAGTCTTTTTGGCCTGTTGACTGTGTAGGGACCTGCGTAAAGAGAAAGGTGCTGGTCCCATCAGAAGCAAGTTCCTGGGAGGAGTGCATTTCTTCTCCTGCTGGGTGTTGGCTTGTTGGCGCTCGTGCCTGAGGATTGTGGTGAAACGTGTATAGGAAGCCGGGCAGGTGCCTTTACACTTGCTTTGTTTGGTGTGGAAGGGAAAGTGATCGTGGTGATGGTGACCTGTGTGTTCTGTGGGTGTCTCTTTGGCAGGATCATGACTGCAACTGTTTTTCTCTTCCGGTTCATTTAGATCCAAAGGCAAGTCAGTTCTTGTGGTGTTTGGGTACTGCTCGGATAAACAAGCTTCCTCTCTGGGGGTCTGGGCCTCTGTAATCCTGACTGGACAGTCCTCAGGCCCTGGCATGACAAGGGTCTCAGCTGACAGAGCAGACTGGAGGAAGCAGGTCGGTGCAGGGCTGTGGGGAGGACTTGGGTTACTAGGGAGTATGGGCATGGAGGCGGAGCGAGTGGGCGCAGAGTTCGAACGCTGAATAATACGCTCAAACTCCATCACCCGAAACGTGACAGCATCCCGGGGGACGATCTCAGTCCTCTCCAAGGTTGCCCTTGCAAGCTGAATTTAACCTGTGATCGGCATCTGGCGTATCTTCATCTCGTGGGCCACAAGCCTCGTGACGCAGATCCTCGCAGCTGTGAGCTTTGGGCCGCTGTTGTGTCGGCTCGATCCGTCTTTCCAGGCTTTCATCGATAGATGGCGATAGCTTGGGTTTAAACTTTGAGGGAAGTATTTGAGGGATGCAGGCTTTGGCAGCAGACAAGGACTTTTTAGTCTTATACTGAGAAGCTAGTGCATTAGTGGCAAGAACTGAGTGAGTATTTACAGAAGAGCAGGGTGAAATCATACAGCCATTCCCACCTTTATAATCTTTAGAAGAAGTGCTAGGGTGGCGCTTGTTAAGCGCTCTCAGGCCCTGCAGTGGGATGTCGCCGCCCTCCAGGACACTCTTGTAAATGTGCCGATCACATTCTGGAGCTGCCTGCCCACCGGCAGACAAGCTGTCCTTCTTCTCCACTTCACCGTTGCCTGCTTTACAGGCTGAGCTGGGTACAAATAGAGATACGAGAGATATGATCATCTTCACGTGACATGTCTCAATAGAACAGAATGCTGGTGCcacatttactttatattaaaaaaatgcttgttattaaaagcagatatataaaacagaaataggAAATAGGAAAACTGTTGAAAACATATACTAAAGACAGAATAATAAcctataaaatatcaaaaaagtattttgccATGGATTATGTTTGAACACTGCTT

Function

NR:

description
PREDICTED: sorbin and SH3 domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136183 True 1816 lncRNA 0.48 3 8465081 8468983

Neighbor

gene id symbol gene type direction distance location
LOC122356335 kif1bp,LOC107666503,LOC107676599,LOC107743600,LOC107601781 coding downstream 43043 8416732 ~ 8422038 (-)
srgn LOC107601835,LOC107725442,LOC107666570 coding downstream 51269 8410008 ~ 8413812 (-)
vps26a vps26a,LOC107676600,LOC107666532 coding downstream 56436 8403168 ~ 8408645 (-)
supv3l1 supv3l1,LOC107725491,LOC107601833,LOC107666535,LOC107743553,LOC107676608,LOC107563062 coding downstream 62563 8396879 ~ 8402518 (-)
hkdc1 hkdc1,LOC107743550,LOC107725456,LOC107676583,LOC103047009 coding downstream 68772 8387046 ~ 8396309 (-)
si:dkey-103j14.5 si:dkey-103j14.5,LOC107725445,LOC107666467,LOC107601805 coding upstream 11909 8480892 ~ 8501602 (-)
prim2 prim2,LOC107666539,LOC107725490,LOC107676604,LOC107743543,LOC108443732 coding upstream 116598 8585581 ~ 8640007 (-)
map3k21 si:ch211-120p12.3,LOC107743542,LOC107666507,LOC107552954,LOC108434955 coding upstream 178471 8647454 ~ 8663589 (-)
rgs17 rgs17,LOC107552952,LOC107743539,LOC107666476,LOC107676609,LOC107601843,LOC107725462 coding upstream 214974 8683957 ~ 8701125 (-)
phactr2 phactr2,LOC107666519,LOC107601847,LOC107552951,LOC107743595,LOC107676579 coding upstream 275861 8744844 ~ 8778565 (-)
G91960 NA non-coding downstream 29161 8435026 ~ 8435920 (-)
G91916 NA non-coding downstream 197008 8267766 ~ 8268073 (-)
G91891 NA non-coding downstream 242466 8168737 ~ 8222615 (-)
G91889 NA non-coding downstream 297149 8157258 ~ 8167932 (-)
G91796 NA non-coding downstream 333233 8131243 ~ 8131848 (-)
G91968 NA non-coding upstream 289 8469272 ~ 8471302 (-)
G92004 NA non-coding upstream 122375 8591358 ~ 8592574 (-)
G92021 pcnxl2,LOC107725461,LOC107601842,LOC107666362,LOC107743596,LOC107676602 non-coding upstream 198513 8667496 ~ 8678386 (-)
LOC122356656 NA non-coding upstream 200252 8669235 ~ 8675536 (-)
LOC122356657 NA non-coding upstream 206604 8675587 ~ 8677257 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 417180 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 648702 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 1965508 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 2068655 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 2237809 6220175 ~ 6227272 (-)
G92267 NA other upstream 646110 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 1705430 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 2163267 10632250 ~ 10634566 (-)
G92819 NA other upstream 2455961 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 2731569 11200552 ~ 11218985 (-)

Expression


Co-expression Network