Gene
RNA
| Item | Value |
|---|---|
| gene id | G3629 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000000 |
| NCBI id | null |
| chromosome length | 19091038 |
| location | 5394847 ~ 5400250 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU4036 | False | 1389 | lncRNA | 0.50 | 9 | 5394847 | 5400250 |
| TU4037 | True | 844 | lncRNA | 0.41 | 5 | 5394847 | 5396994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000000_05380329_05386853 | ANXA5A | coding | downstream | 7994 | 5380055 ~ 5386853 (-) |
| CI01000000_05311908_05314253 | NA | coding | downstream | 80591 | 5310741 ~ 5314256 (-) |
| CI01000000_05286804_05288152 | NA | coding | downstream | 106633 | 5286788 ~ 5288214 (-) |
| CI01000000_04986976_04998622 | NA | coding | downstream | 395828 | 4986709 ~ 4999019 (-) |
| CI01000000_04924131_04926561 | NA | coding | downstream | 468081 | 4924058 ~ 4926766 (-) |
| CI01000000_05409025_05413963 | TMEM33.L, TMEM33 | coding | upstream | 7989 | 5408239 ~ 5414411 (-) |
| CI01000000_05422567_05424822 | CRYBA1L1 | coding | upstream | 21996 | 5422246 ~ 5425430 (-) |
| CI01000000_05431517_05435978 | CABP2B, CABP2 | coding | upstream | 31267 | 5431517 ~ 5435978 (-) |
| CI01000000_05465020_05466303 | NA | coding | upstream | 64394 | 5464058 ~ 5466516 (-) |
| CI01000000_05477927_05479435 | RAB33BA, RAB33B | coding | upstream | 77012 | 5477262 ~ 5479435 (-) |
| G3627 | NA | non-coding | downstream | 344 | 5393683 ~ 5394503 (-) |
| G3616 | NA | non-coding | downstream | 18333 | 5376213 ~ 5376514 (-) |
| G3615 | NA | non-coding | downstream | 20500 | 5374007 ~ 5374347 (-) |
| G3614 | NA | non-coding | downstream | 21713 | 5372248 ~ 5373134 (-) |
| G3613 | NA | non-coding | downstream | 24284 | 5369678 ~ 5370563 (-) |
| G3628 | NA | non-coding | upstream | 1429 | 5401679 ~ 5401968 (-) |
| G3528 | NA | non-coding | upstream | 2672 | 5402922 ~ 5406773 (-) |
| G3644 | NA | non-coding | upstream | 80435 | 5480685 ~ 5481627 (-) |
| G3546 | NA | non-coding | upstream | 115155 | 5515405 ~ 5516902 (-) |
| CI01000000_05685300_05686328 | NA | non-coding | upstream | 188919 | 5683707 ~ 5687424 (-) |
| G2730 | NA | other | downstream | 1004695 | 4386383 ~ 4390152 (-) |
| CI01000000_04079738_04081018 | MIF | other | downstream | 1313730 | 4078121 ~ 4081117 (-) |
| G2484 | NA | other | downstream | 1821293 | 3570066 ~ 3573554 (-) |
| CI01000000_03564077_03564373 | NA | other | downstream | 1827756 | 3562887 ~ 3567571 (-) |
| CI01000000_03245643_03246684 | NA | other | downstream | 2148132 | 3245134 ~ 3246721 (-) |
| G3650 | NA | other | upstream | 140213 | 5540463 ~ 5540881 (-) |
| G3716 | NA | other | upstream | 600157 | 6000407 ~ 6000769 (-) |
| G3931 | NA | other | upstream | 756763 | 6157013 ~ 6403525 (-) |
| CI01000000_10407402_10409508 | UBL3B, UBL3.S, UBL3 | other | upstream | 5004078 | 10407395 ~ 10409950 (-) |
