G92004


Basic Information

Item Value
gene id G92004
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8591358 ~ 8592574 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU136224
atgccctgcgcgcctctcctcgggagaccggtctcttccccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcacgatggacctcaccccgccgtcccgccacagtggtggagaatgcgggcaaggcggagcttagacggcacagttgggcaaCGCCTGATGACATCATCCTCTCGCTGGTATCCATGCcggacggaggaacaacggagactcgctcccagccaccaggaagggtaagtgacgcctgcgtttactgtcatttacccggtggctggttgagcattccgactaattcccggtttctctgtcccggtgcgagaggggagttgcccggagaggaatccctgccccgcccactccgaccgctggagcctggttgaggaaggtagcactcctgcgtggcggCGCACCGCCTGACGGGTTGACGCTTggggaggggaatgtgacgagtcggctgcccctcctctttatcgtcaccatcaccccgtcctttattcgccgcccttcaccaggctcccgacgggagtgggtgtgttcgagagagGAGGGCGTGGTAtcgccaggtctggcggcgtgtgacgaggcacacctgaaggggatttagccttgtcaccgccgccgttaaatgccctgcgcgcctctcctcgggagaccggtctcttcccccgtgcatgcacgctggtgtcctcgtgggtccaggaagggtgcacgatggacctcaccccgccgtccgagaacacagagctcatcccactctgccgcccggagcaacgaagcgacggagacgccgcggaagaagccgccgcccgcgcgcccggaccagaaaaaggggagcgtgtgcgaccgccggactccgccccttacctggacccttcccccctggaacacggcc

Function

GO:

id name namespace
GO:0044428 obsolete nuclear part cellular_component
GO:0070013 intracellular organelle lumen cellular_component
GO:0032991 protein-containing complex cellular_component
GO:0031974 membrane-enclosed lumen cellular_component
GO:0031981 nuclear lumen cellular_component
GO:0043233 organelle lumen cellular_component

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03440 Homologous recombination
ko03460 Fanconi anemia pathway
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU136224 True 903 lncRNA 0.65 2 8591358 8592574

Neighbor

gene id symbol gene type direction distance location
si:dkey-103j14.5 si:dkey-103j14.5,LOC107725445,LOC107666467,LOC107601805 coding downstream 89756 8480892 ~ 8501602 (-)
LOC122356335 kif1bp,LOC107666503,LOC107676599,LOC107743600,LOC107601781 coding downstream 169320 8416732 ~ 8422038 (-)
srgn LOC107601835,LOC107725442,LOC107666570 coding downstream 177546 8410008 ~ 8413812 (-)
vps26a vps26a,LOC107676600,LOC107666532 coding downstream 182713 8403168 ~ 8408645 (-)
supv3l1 supv3l1,LOC107725491,LOC107601833,LOC107666535,LOC107743553,LOC107676608,LOC107563062 coding downstream 188840 8396879 ~ 8402518 (-)
map3k21 si:ch211-120p12.3,LOC107743542,LOC107666507,LOC107552954,LOC108434955 coding upstream 54880 8647454 ~ 8663589 (-)
rgs17 rgs17,LOC107552952,LOC107743539,LOC107666476,LOC107676609,LOC107601843,LOC107725462 coding upstream 91383 8683957 ~ 8701125 (-)
phactr2 phactr2,LOC107666519,LOC107601847,LOC107552951,LOC107743595,LOC107676579 coding upstream 152270 8744844 ~ 8778565 (-)
cog2 cog2,LOC107601846,LOC107725477,LOC107666500,LOC107743537,LOC107676580,LOC107552949 coding upstream 190424 8782998 ~ 8790869 (-)
galnt2 galnt2,LOC107743534,LOC107725470,LOC107666462,LOC107676591 coding upstream 216877 8809451 ~ 8874001 (-)
G91968 NA non-coding downstream 120056 8469272 ~ 8471302 (-)
G91967 LOC107743599,LOC107601782,LOC107725459,LOC107666363 non-coding downstream 122375 8465081 ~ 8468983 (-)
G91960 NA non-coding downstream 155438 8435026 ~ 8435920 (-)
G91916 NA non-coding downstream 323285 8267766 ~ 8268073 (-)
G91891 NA non-coding downstream 368743 8168737 ~ 8222615 (-)
G92021 pcnxl2,LOC107725461,LOC107601842,LOC107666362,LOC107743596,LOC107676602 non-coding upstream 74922 8667496 ~ 8678386 (-)
LOC122356656 NA non-coding upstream 76661 8669235 ~ 8675536 (-)
LOC122356657 NA non-coding upstream 83013 8675587 ~ 8677257 (-)
G92195 sf3b5,LOC107601807 non-coding upstream 146401 8738975 ~ 8740089 (-)
G92205 pgbd5,LOC107601786,LOC107725485,LOC107552948,LOC107743535 non-coding upstream 204297 8796871 ~ 8803406 (-)
G91775 LOC107601816,LOC107666427,LOC107726984 other downstream 543457 8043565 ~ 8047901 (-)
si:dkey-191g9.7 LOC107666390,LOC107713886,LOC107743576,LOC107696878,LOC107555321 other downstream 774979 7809849 ~ 7816379 (-)
lrpprc lrpprc,LOC107747535,LOC107698749,LOC107666369,LOC107585278,LOC107733673,LOC107587880 other downstream 2091785 6453531 ~ 6499573 (-)
sdccag8 LOC107733766,LOC107587841,LOC107585251,LOC107747587,LOC107747538,LOC107698724 other downstream 2194932 6358201 ~ 6396426 (-)
LOC122356805 LOC107666373,LOC107587882 other downstream 2364086 6220175 ~ 6227272 (-)
G92267 NA other upstream 522519 9115093 ~ 9115551 (-)
LOC122356841 fancl,LOC107585345,LOC107718841 other upstream 1581839 10174413 ~ 10191766 (-)
c13h10orf53 zgc:153142,LOC107683743,LOC107588649,LOC107707510,LOC107716306,LOC107673897 other upstream 2039676 10632250 ~ 10634566 (-)
G92819 NA other upstream 2332370 10924944 ~ 10935331 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other upstream 2607978 11200552 ~ 11218985 (-)

Expression


Co-expression Network