G92042


Basic Information

Item Value
gene id G92042
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 8783008 ~ 8783630 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU136276
attttttttattgtttaatcttGGTTAAGTCTTAGTCCCATTCTTACCAGGTGAAACAAACTCCAACAcctaatttgaaaaaaaaaaaaaaaaaaaaaaaaaacccacctgTAATTTAAACATGAAACCTCTTTAGCGTTTGTACTGTTGATGTTATTTGGCAGGGTTCACCCAGAGTTAACATCTGAGAAAAACAGTTTCTGACAGATACAACTCCAGCAGACTCCAGCAGATGAGTGCTGATTGGTTCATACAAAAAACTCTTTTCATTTCTCAAATAAATCTGAACCATAAAATACATGGCTTTTTGGCCATATAATCCCATATAGTTCAACAATAAATAACTTATCAGGGAGtaaatcacattattttagTGTGCTGCTCCTCCAGACAGGTCGAGATAGCTGCTATTAGAGGAGTTGAGGGATGGCAAAACTTCATAAAACCACTCCTGGAGCAGATACTGAGCCATGTGGCATCATTCAGATCAGTAACCATTTTGGACCCTACTTCTGCTTTAGGACCCTGTCTGTTCCGCTGAAGCGAGATCTCTTGCTTCCTGTACCAGTTCCAGCAGAGAAGAGAACATGGTGATGTCGCTTGGCTGAAGACCCATCTTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136276 True 623 lncRNA 0.39 1 8783008 8783630

Neighbor

gene id symbol gene type direction distance location
agt agt,LOC107666501,LOC107601848,LOC107725476,LOC107676582,LOC107552950,LOC107743538 coding upstream 240 8779155 ~ 8782768 (+)
oprm1 oprm1,LOC107676562,LOC107601844,LOC107725432,LOC107743618,LOC107666379,LOC107552929 coding upstream 48050 8721028 ~ 8734958 (+)
il22ra2 LOC107666403,LOC107725447,LOC107601806,LOC107676596,LOC107552930,LOC107743540 coding upstream 135557 8644655 ~ 8647451 (+)
khdrbs2 khdrbs2,LOC107743545,LOC107666564,LOC107676606,LOC108443734 coding upstream 227605 8501459 ~ 8555403 (+)
LOC122356333 LOC107601782,LOC107666363,LOC107725459,LOC107563040 coding upstream 303934 8436620 ~ 8479074 (+)
pgbd5 pgbd5,LOC107725485,LOC107552948,LOC107743535 coding downstream 7526 8791156 ~ 8807527 (+)
abcb10 abcb10,LOC107666478,LOC107725469,LOC107601852,LOC107676605,LOC107743532,LOC107552914 coding downstream 109363 8892993 ~ 8900282 (+)
acta1b act2,actc1a,LOC105907633,LOC107678759,LOC108430668 coding downstream 117920 8901550 ~ 8905011 (+)
ccsapb LOC107725482,LOC107601854,LOC107666447,LOC107676587,LOC107552946,LOC107743530 coding downstream 122256 8905886 ~ 8909793 (+)
pdcd2 pdcd2,LOC107725489,LOC107666434,LOC107601856,LOC107676576,LOC107743527,LOC107552926 coding downstream 157098 8940728 ~ 8942899 (+)
G92036 phactr2,LOC107601847,LOC107666519 non-coding upstream 25161 8754719 ~ 8757847 (+)
G92034 phactr2,LOC107666519,LOC107601847 non-coding upstream 29124 8752467 ~ 8753884 (+)
G91995 NA non-coding upstream 190354 8591208 ~ 8592654 (+)
G91991 NA non-coding upstream 197005 8585357 ~ 8586003 (+)
G91944 NA non-coding upstream 301016 8479443 ~ 8481992 (+)
G92045 NA non-coding downstream 2965 8786595 ~ 8786864 (+)
G92046 NA non-coding downstream 3358 8786988 ~ 8787849 (+)
G92047 NA non-coding downstream 5367 8788997 ~ 8789201 (+)
G92048 NA non-coding downstream 6101 8789731 ~ 8791052 (+)
G92066 NA non-coding downstream 53086 8836716 ~ 8896909 (+)
sf3b5 sf3b5,LOC107601807 other upstream 42913 8739036 ~ 8740095 (+)
pcnx2 pcnxl2,LOC107725461,LOC107601842,LOC107743596,LOC107666362,LOC107676602,LOC107552953 other upstream 99956 8666267 ~ 8683052 (+)
G91833 slc37a1 other upstream 472184 8306486 ~ 8310824 (+)
zswim8 LOC107666425,LOC107565928,LOC107713895,LOC107743573 other upstream 896318 7858698 ~ 7886690 (+)
chchd1 LOC107713887,LOC107565922,LOC107743624,LOC107696882,LOC107666381,LOC107555316 other upstream 944063 7836180 ~ 7838945 (+)
fuom fuom,LOC107676595,LOC107666397,LOC107601808 other downstream 242313 9025943 ~ 9027909 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other downstream 297218 9080848 ~ 9089121 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other downstream 377887 9161517 ~ 9164114 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other downstream 646548 9430178 ~ 9434605 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other downstream 1421483 10205113 ~ 10249725 (+)

Expression


Co-expression Network