fuom (fuom,LOC107676595,LOC107666397,LOC107601808)


Basic Information

Item Value
gene id fuom
gene name fuom,LOC107676595,LOC107666397,LOC107601808
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 9025943 ~ 9027909 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU136353
GTGATTCTCCACGAACGCTCTCGCGATCTGTCACTGCTTCGAAATGGTCATACTAAAGGGAATCCCGTCAATACTCACGCCTGAATTATTGTATGTTTTGGCGCAAATGGGTCACGGAGACGAGCTGGTTCTCGCAGACGCAAATTTTCCGACCTCTTCTGTTTGTAAATGCGGTCCAGTGGAGATAAGAGCCGACGGTACGTGTCCTGCAAGCATCTAAACCTTTACGAAAGGCAGCAGgTGTGGGTATACCTGAACTTCTGAAGGCAATACTAAAGCTTTTTCCTCTTGATACCTATGATGATCCGGCAGCCGTCATGGACCGTGTGCAGAGTGACAAATTAAAGGGTCTGCAAGTGCCCGTATGGGACCAGTACTCTGACCTCCTGAAACAAGCAGGATCAGATggTAACTTCAGGTTTGTCGAGCGGTTTGCATTTTATGAGCGTGCCAAGAAGTCGTTTGCTGTAGTGGCAACTGGGGAGACTGCACTTTATGGAAATCTCATAATCAAGAAAGGTGTCATTCCTCCTGGTGAAGAGTGCTGAAGGCTGTTTGCTAGTTTTTACACCAAGTTGCAATAGATAACGCACATAGAATAGAATACCTTTGCGTAAATAAAGattgtgtatataaatttaatgccacccttttttattttgattgcaaaAATGAGTGTTTATAATTTTTCCTAATTTTTTGTTCGTATTTTGTGTAACGTGATGTTGTAAAATAAGCAACAAGACCATGtctttaataaatagattaaaagagaaaatca
>XM_043255823.1
CTACCAATTGCAATGCGCGTAGAGGTCACGTGATTCTCCACGAACGCTCTCGCGATCTGTCACTGCTTCGAAATGGTCATACTAAAGGGAATCCCGTCAATACTCACGCCTGAATTATTGTATGTTTTGGCGCAAATGGGTCACGGAGACGAGCTGGTTCTCGCAGACGCAAATTTTCCGACCTCTTCTGTTTGTAAATGCGGTCCAGTGGAGATAAGAGCCGACGgTGTGGGTATACCTGAACTTCTGAAGGCAATACTAAAGCTTTTTCCTCTTGATACCTATGATGATCCGGCAGCCGTCATGGACCGTGTGCAGAGTGACAAATTAAAGGGTCTGCAAGTGCCCGTATGGGACCAGTACTCTGACCTCCTGAAACAAGCAGGATCAGATggTAACTTCAGGTTTGTCGAGCGGTTTGCATTTTATGAGCGTGCCAAGAAGTCGTTTGCTGTAGTGGCAACTGGGGAGACTGCACTTTATGGAAATCTCATAATCAAGAAAGGTGTCATTCCTCCTGGTGAAGAGTGCTGAAGGCTGTTTGCTAGTTTTTACACCAAGTTGCAATAGATAACGCACATAGAATAGAATACCTTTGCGTAAATAAAGattgtgtatataaa

Function

symbol description
fuom Predicted to enable fucose binding activity and racemase and epimerase activity, acting on carbohydrates and derivatives. Predicted to be involved in fucose metabolic process and fucosylation. Predicted to act upstream of or within monosaccharide metabolic process. Is expressed in blood. Orthologous to human FUOM (fucose mutarotase).

NR:

description
fucose mutarotase isoform X1

GO:

id name namespace
GO:0006004 fucose metabolic process biological_process
GO:0042806 fucose binding molecular_function
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136353 True 781 lncRNA 0.42 6 9025972 9027909
XM_043255823.1 False 623 mRNA 0.46 6 9025943 9027765

Neighbor

gene id symbol gene type direction distance location
echs1 echs1,LOC107601864,LOC107666378,LOC107676592,LOC107743519,LOC107725439 coding upstream 2257 9021295 ~ 9023686 (+)
lgalslb lgalsl,LOC107601863,LOC107676594,LOC107666541,LOC107552938 coding upstream 5060 9013992 ~ 9020883 (+)
sertad2b sertad2,sertad2b,LOC107666512,LOC107676574,LOC107743523,LOC107725465 coding upstream 17599 8975089 ~ 9008344 (+)
rab1ab rab1a,LOC107676578,LOC107666439,LOC103035225,LOC107725478,LOC107601860,LOC105005759 coding upstream 69246 8950895 ~ 8956697 (+)
zgc:153169 zgc:153169,LOC107725444,LOC107666437,LOC107601788,LOC107552913 coding upstream 75361 8947750 ~ 8950582 (+)
msx3 msx3,LOC107743518,LOC107552925,LOC107601809,LOC107725487,LOC107666509 coding downstream 38171 9066080 ~ 9068744 (+)
adam8a adam8,LOC107725440,LOC107666510,LOC107743615,LOC107676563 coding downstream 44933 9072842 ~ 9080744 (+)
cfap43 cfap43,LOC107743591,LOC107666552,LOC107601792,LOC107667278,LOC107578899,LOC107683315 coding downstream 75124 9103033 ~ 9116177 (+)
col17a1b LOC107667282,LOC107743515 coding downstream 92439 9120348 ~ 9137429 (+)
si:ch211-223p8.8 LOC107552909,LOC107743613,LOC107552922,LOC107667280 coding downstream 131738 9159647 ~ 9160722 (+)
G92087 slc1a4,LOC107725464,LOC107552941 non-coding upstream 60354 8929442 ~ 8965589 (+)
G92066 NA non-coding upstream 129034 8836716 ~ 8896909 (+)
G92048 NA non-coding upstream 234891 8789731 ~ 8791052 (+)
G92047 NA non-coding upstream 236742 8788997 ~ 8789201 (+)
G92046 NA non-coding upstream 238094 8786988 ~ 8787849 (+)
G92108 erlin1,LOC107743516,LOC107725471,LOC107666491,LOC107601865,LOC107676597 non-coding downstream 22458 9050367 ~ 9097905 (+)
G92111 NA non-coding downstream 112308 9140217 ~ 9144511 (+)
G92147 NA non-coding downstream 236155 9264064 ~ 9275699 (+)
G92313 NA non-coding downstream 422537 9450446 ~ 9450689 (+)
G92334 mcmbp,LOC107726945,LOC107601886,LOC107559330 non-coding downstream 451512 9479421 ~ 9479752 (+)
sf3b5 sf3b5,LOC107601807 other upstream 285848 8739036 ~ 8740095 (+)
pcnx2 pcnxl2,LOC107725461,LOC107601842,LOC107743596,LOC107666362,LOC107676602,LOC107552953 other upstream 342891 8666267 ~ 8683052 (+)
G91833 slc37a1 other upstream 715119 8306486 ~ 8310824 (+)
zswim8 LOC107666425,LOC107565928,LOC107713895,LOC107743573 other upstream 1139253 7858698 ~ 7886690 (+)
chchd1 LOC107713887,LOC107565922,LOC107743624,LOC107696882,LOC107666381,LOC107555316 other upstream 1186998 7836180 ~ 7838945 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other downstream 52939 9080848 ~ 9089121 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other downstream 133608 9161517 ~ 9164114 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other downstream 402269 9430178 ~ 9434605 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other downstream 1177204 10205113 ~ 10249725 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other downstream 1388331 10416240 ~ 10420426 (+)

Expression


Co-expression Network