LOC122356813 (adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663)


Basic Information

Item Value
gene id LOC122356813
gene name adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 10205113 ~ 10249725 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU136946
GTCACTAAACATGCTCAGTAGaCCGAAGACATTGAGGAGATTGCGAAGAAGGCCCAAAGCTTACCCAAAGAGAACAAGAAAAGGCAGAGGATTGTTGTCTTCACCCAAGGCAAAGAAGGAACTGTAATGACCAAAGGTGACAAGGTGGAGACATTCCCTGTCCTGAAGATCGACCAGAGCCAGATAGTGGACACCAACGGTGCAGGAGATGCCTTTGTTGGAGgtttcCTGTCTCAGCTGGTACAGGATAAGACCTTTGAGCAGTGCATCCGTGCTGGACACTACGCCGCTAACGTCATTATTCGCCACGCGGGCTGCACATTCCCAGAAAAGCCAGACTTCCACTGATGGGCCACTGAGAGACCGGAAGATACGGCCGTCCGAGTGTTTTATAGGActaatgccttttttttaattgactttttatcTTCTGTTCCTCTTTCCTCTCTTGTTCACTGCCTGCCTTCTGCTGTGCCTCTGTTTTGTCTGATTCACAGCCTAATGCGATCACAGAGACgtatttcacattaaaaactgtttacaaAAGAGGCAAAAGATGAATTTCTGTTGGAAATATTGAATCGTTTTTACTACTAGAGCCATTTTAGGATCGCAGTTTAGCGTGTTTGCTAACACAATAATTTTAGTTGTAATTAGCCGTAAAAACCGAAGCTGGTATTACAAACGTACAGAAGCCAGATTAAACTTCATTAAAATCAAAGGCCCATTTTGTGTCAAAGATATTTTGTTGGCCAGTCTTGCCGTTGTAAACCAAATGTATTTGTGGAAAACACTTATGTGTCACAAActgccaaaataaacaaaaaggctGCA
>TU136950
GTCACTAAACATGCTCAGTAGGTAAGACGATGACTCAGGTGCATGTTTTACAAGGTGCAGTATTAAATGAAATCTAATCTGATCTGGAAGAACTTAATATTTGCTTCTTACCCTCAAGtatgtgttctttttttctcttttttttcttgtgcagaCCGAAGACATTGAGGAGATTGCGAAGAAGGCCCAAAGCTTACCCAAAGAGAACAAGAAAAGGCAGAGGATTGTTGTCTTCACCCAAGGCAAAGAAGGAACTGTAATGACCAAAGGTGCGTGGGTCAGTTTTCATCTCTTCGGAATTAGGTTTTTATAATCGCGCTTTTAGATCAGGACCGTCtcatgttaaaaagaaataacacaaCCCCCAGAAACACTTTTAGTTATTTACAGTTGGAATGATGTTGATAGATTTCCTCTGTAAACATTAGTGAATAGCCTCAAACAAGGTCATCTTAAGAATAGAATGCCGTTCTCTCTGGCGGCTTTCGATGTTGCTCAGTGTGAAATGAATTCGCCCTTGGCAATGACCTCCtatctctcagatgcagaattTGAATCCAAAGGGCTGTTGCAGTCACATTGCTATGGTAACTGAGTGGTAGGGGATCTTTCTGTGGAGTGGATAAGTTTAACCGAATAGTGGGGAAAGCATAACAGTTGTAGCTGATTAAACCAGCGGGGTTTGAAGTAGAAAGCAGGGAGGCGGCAGGAATGTAAAGGGGACAGGCTGAGCTGTTTAtgctcttcttctcctgctcttcaTTTCTTCTCCTTTTGCACCTGCCAGAATGGCATTCCTCGCTTTACAGTCGGCCAGTGCCCAGTCTCGGCTAAATTCCATTTGTTCAGGATAATTCGCCTTTTATTGCCTTTTGTATTTTGATTCATTGAATTTCACAGTGTTCTTACAATGAATTCTGTCGAGGTTGGACATTATTTAAATCTCTCGGGAACACAATGAGCAGGCTGCCCTTGCAACGCTCTGGAGACCCTGGAAAAACAATGAGGTGACAAGGTGGAGACATTCCCTGTCCTGAAGATCGACCAGAGCCAGATAGTGGACACCAACGGTGCAGGAGATGCCTTTGTTGGAGgtttcCTGTCTCAGCTGGTACAGGATAAGACCTTTGAGCAGTGCATCCGTGCTGGACACTACGCCGCTAACGTCATTATTCGCCACGCGGGCTGCACATTCCCAGAAAAGCCAGACTTCCACTGATGGGCCACTGAGAGACCGGAAGATACGGCCGTCCGAGTGTTTTATAGGActaatgccttttttttaattgactttttatcTTCTGTTCCTCTTTCCTCTCTTGTTCACTGCCTGCCTTCTGCTGTGCCTCTGTTTTGTCTGATTCACAGCCTAATGCGATCACAGAGACgtatttcacattaaaaactgtttacaaAAGAGGCAAAAGATGAATTTCTGTTGGAAATATTGAATCGTTTTTACTACTAGAGCCATTTTAGGATCGCAGTTTAGCGTGTTTGCTAACACAATAATTTTAGTTGTAATTAGCCGTAAAAACCGAAGCTGGTATTACAAACGTACAGAAGCCAGATTAAACTTCATTAAAATCAAAGGCCCATTTTGTGTCAAAGATATTTTGTTGGCCAGTCTTGCCGTTGTAAACCAAATGTATTTGTGGAAAACACTTATGTGTCACAAActgccaaaataaacaaaaaggctGCA
>TU136954
cATGCAACAAAATCAATACCGGCTCTATTTTCTGAGCTAACATTCGTCGGCATATGTTTCTNTGTGCGTTTACGCACTgggatgtgtgtgcatgtgtgcgttcATTAAACATATGTTGGCACATGCTTTCTGTCCGGTATTTTGCAAGCGGCGGAtctgatttgtctttttttctttttctttttctttttttttccccaatgtctgtttgcatgtgtgtgtgcaggtttcCTGTCTCAGCTGGTACAGGATAAGACCTTTGAGCAGTGCATCCGTGCTGGACACTACGCCGCTAACGTCATTATTCGCCACGCGGGCTGCACATTCCCAGAAAAGCCAGACTTCCACTGATGGGCCACTGAGAGACCGGAAGATACGGCCGTCCGAGTGTTTTATAGGActaatgccttttttttaattgactttttatcTTCTGTTCCTCTTTCCTCTCTTGTTCACTGCCTGCCTTCTGCTGTGCCTCTGTTTTGTCTGATTCACAGCCTAATGCGATCACAGAGACgtatttcacattaaaaactgtttacaaAAGAGGCAAAAGATGAATTTCTGTTGGAAATATTGAATCGTTTTTACTACTAGAGCCATTTTAGGATCGCAGTTTAGCGTGTTTGCTAACACAATAATTTTAGTTGTAATTAGCCGTAAAAACCGAAGCTGGTATTACAAACGTACAGAAGCCAGATTAAACTTCATTAAAATCAAAGGCCCATTTTGTGTCAAAGATATTTTGTTGGCCAGTCTTGCCGTTGTAAACCAAATGTATTTGTGGAAAACACTTATGTGTCACAAActgccaaaataaacaaaaaggctGCA
>XM_043255884.1
ATGACAAAGAGTTATAGGAGGATCTACATTATCCCAAATGACTCATGTAAGGTGTATCTCACCAAACACTCACTTGCATGCAGGAACCACAGGTCTGATGAAACGTTATTAAAATATGAGTGCATCTGTGTCCTTGTTTTCAGTCAGAATGCTCTGTTCGGGATGGGGAACCCGCTGCTGGACATCTCCGCCGTGGTGGACAAGGACTTTCTCGATAAGTATGGCTTGAAGCCCAATGATCAGATCCTGGCGGAGGAGAAGCACAAAGCTCTGTTTGAAGAGATAGTCAAGAAATTCAAGGTTGAATATCACGCTGGAGGTGCCACTCAGAACTCTGTAAAAGTCGCACAGTGGATGATCCAGGAGCCGCACAAAGTGGCCACCTTCTTCGGCTGCATTGGGAAGGATAAGTTCGGGAAGATCCTTAAGGAGAAGGCAGAGGAGGCCCACGTGGACGCCCACTACTACGAGCAGAGCGAAGAGCCCACGGGGACCTGCGCTGCCTGCATCACTGGCGACAACAGGTCTCTTGTTGCGAATCTTGCGGCTGCTAATTGCTACAAGAAGGAGAAACACCTCGATCTGGAGGAGAACTGGAAACTTGTTGAGAAAGCCCAAGTTTACTACATCGCTGGGTTTTTCCTGACCGTGTCCTTGGAGTCGATCCTGAAGGTAGCCAAACACGCTTCTGAAAGCAACAAGATCTTCTGCTTAAATCTGTCAGCTCCATTCATCTGTGAGTTCTTCAAGGAGGCCCTGATGAAGGTTATACCTTACGTGGACATCCTTTTTGGAAACGAGACGtatgtgttctttttttctcttttttttcttgtgcagaCCGAAGACATTGAGGAGATTGCGAAGAAGGCCCAAAGCTTACCCAAAGAGAACAAGAAAAGGCAGAGGATTGTTGTCTTCACCCAAGGCAAAGAAGGAACTGTAATGACCAAAGGTGACAAGGTGGAGACATTCCCTGTCCTGAAGATCGACCAGAGCCAGATAGTGGACACCAACGGTGCAGGAGATGCCTTTGTTGGAGgtttcCTGTCTCAGCTGGTACAGGATAAGACCTTTGAGCAGTGCATCCGTGCTGGACACTACGCCGCTAACGTCATTATTCGCCACGCGGGCTGCACATTCCCAGAAAAGCCAGACTTCCACTGATGGGCCACTGAGAGACCGGAAGATACGGCCGTCCGAGTGTTTTATAGGActaatgccttttttttaattgactttttatcTTCTGTTCCTCTTTCCTCTCTTGTTCACTGCCTGCCTTCTGCTGTGCCTCTGTTTTGTCTGATTCACAGCCTAATGCGATCACAGAGACgtatttcacattaaaaactgtttacaaAAGAGGCAAAAGATGAATTTCTGTTGGAAATATTGAATCGTTTTTACTACTAGAGCCATTTTAGGATCGCAGTTTAGCGTGTTTGCTAACACAATAATTTTAGTTGTAATTAGCCGTAAAAACCGAAGCTGGTATTACAAACGTACAGAAGCCAGATTAAACTTCATTAAAATCAAAGGCCCATTTTGTGTCAAAGATATTTTGTTGGCCAGTCTTGCCGTTGTAAACCAAATGTATTTGTGGAAAACACTTATGTGTCACAAActgccaaaataaacaaaaaggctGCA

Function

symbol description
adka Predicted to enable adenosine kinase activity. Predicted to be involved in AMP salvage. Predicted to act upstream of or within phosphorylation and purine ribonucleoside salvage. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including digestive system; fin; immature eye; nervous system; and periderm. Human ortholog(s) of this gene implicated in hypermethioninemia due to adenosine kinase deficiency. Orthologous to human ADK (adenosine kinase).

NR:

description
adenosine kinase a

GO:

id name namespace
GO:0006166 purine ribonucleoside salvage biological_process
GO:0016310 phosphorylation biological_process
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0004001 adenosine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136946 False 834 TUCP 0.43 4 10235916 10249725
TU136950 True 1705 lncRNA 0.42 3 10235916 10249725
TU136954 False 837 lncRNA 0.41 2 10248688 10249725
XM_043255884.1 False 1653 mRNA 0.46 10 10205113 10249725

Neighbor

gene id symbol gene type direction distance location
fancl fancl,LOC107585345,LOC107718841 coding upstream 137941 10051087 ~ 10067172 (+)
bcl11aa bcl11aa,bcl11a,LOC107666449,LOC107601892,LOC107655449,LOC107559339,LOC107743494 coding upstream 537275 9615027 ~ 9667838 (+)
neurog3 LOC107666354,LOC107726936,LOC107601803,LOC107655417 coding upstream 636586 9567617 ~ 9568527 (+)
pcbd1 pcbd1,LOC107559335,LOC107743500,LOC107601888,LOC107655445 coding upstream 652618 9549733 ~ 9552495 (+)
LOC122356643 sec23ip,LOC107666414,LOC107655440,LOC107743502 coding upstream 713707 9482211 ~ 9491406 (+)
LOC122356189 inaa,LOC107588658,LOC107656930,LOC107707692,LOC107716329,LOC107673959 coding downstream 44481 10294206 ~ 10297714 (+)
ldb1a ldb1a,ldb1,LOC107707596,LOC107585322,LOC107673939,LOC108442788 coding downstream 63689 10313414 ~ 10333604 (+)
LOC122357143 NA coding downstream 79419 10329144 ~ 10329279 (+)
prom2 LOC107707565,LOC107588656,LOC107688306,LOC107585354 coding downstream 84950 10334675 ~ 10343979 (+)
nsmce4a LOC107707575,LOC107588653,LOC107688307,LOC107716332,LOC107585317 coding downstream 100063 10349788 ~ 10354314 (+)
G92524 NA non-coding upstream 39457 10164559 ~ 10165656 (+)
G92513 NA non-coding upstream 134330 10068488 ~ 10070783 (+)
LOC122356803 NA non-coding upstream 155671 10044781 ~ 10049442 (+)
G92434 NA non-coding upstream 474111 9730725 ~ 9731002 (+)
G92432 NA non-coding upstream 477146 9724396 ~ 9727967 (+)
G92552 NA non-coding downstream 25859 10275584 ~ 10276178 (+)
G92563 NA non-coding downstream 59512 10309237 ~ 10309776 (+)
G92671 slc18a3,slc18a3a,LOC107708354,LOC107683739,LOC107716340,LOC108442244 non-coding downstream 392831 10642556 ~ 10645237 (+)
G92675 NA non-coding downstream 407783 10657508 ~ 10702103 (+)
LOC122357062 NA non-coding downstream 503508 10753233 ~ 10763691 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other upstream 770508 9430178 ~ 9434605 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 1040999 9161517 ~ 9164114 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other upstream 1115992 9080848 ~ 9089121 (+)
fuom fuom,LOC107676595,LOC107666397,LOC107601808 other upstream 1177204 9025943 ~ 9027909 (+)
sf3b5 sf3b5,LOC107601807 other upstream 1465018 8739036 ~ 8740095 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other downstream 166515 10416240 ~ 10420426 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other downstream 715130 10964855 ~ 10968914 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other downstream 963801 11213526 ~ 11218175 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other downstream 1005869 11255594 ~ 11262620 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other downstream 1139660 11389385 ~ 11413515 (+)

Expression


Co-expression Network