G92552


Basic Information

Item Value
gene id G92552
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 10275584 ~ 10276178 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU136969
GAAAGGGTTTGAAATTGCGCTATGGTCagttatttttacttgattttaaaagatatatttttatttgaattcaccTGATGCTAGACCATCTTAATTCAGCTCCGCATTTGCagtaagacatttaaaatatttctaggAATAAATTAGCGGTTAAGTGATGTGTTAAGAGGAAGAATGAAGGACATATGGCTAGGGGAAGGCAAAATGAAGGAATGATCTCACAGATTCAAATCCCATCACAGGTCTTCCTATGGACACCTACATACAATCACAGCACAGTGCAAAAGCATTGatggttttgttcattttgtatttttagtgctgTGCTGTGATGAGTacatgggagaaaaaaaaacatcaattacAAAACAGATAATCAGTCAGCACTGCAGgtcaacaaaaataactttggCATACCTCATAGAAGGATGACAGTGGGCCAGTTCCTGTGGTAAGCTTTGTAATAAAGGAATACATGGACTATATATTATATCAGTACACACTGGCTAACGGCACTACATAAATAATTCTTGTGTCTTATAAGTCTTGTATGCTTAGAAATGACATTTCAGGTCTTCATACCAACagactattt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU136969 True 595 lncRNA 0.35 1 10275584 10276178

Neighbor

gene id symbol gene type direction distance location
fancl fancl,LOC107585345,LOC107718841 coding upstream 208412 10051087 ~ 10067172 (+)
bcl11aa bcl11aa,bcl11a,LOC107666449,LOC107601892,LOC107655449,LOC107559339,LOC107743494 coding upstream 607746 9615027 ~ 9667838 (+)
neurog3 LOC107666354,LOC107726936,LOC107601803,LOC107655417 coding upstream 707057 9567617 ~ 9568527 (+)
pcbd1 pcbd1,LOC107559335,LOC107743500,LOC107601888,LOC107655445 coding upstream 723089 9549733 ~ 9552495 (+)
LOC122356643 sec23ip,LOC107666414,LOC107655440,LOC107743502 coding upstream 784178 9482211 ~ 9491406 (+)
LOC122356189 inaa,LOC107588658,LOC107656930,LOC107707692,LOC107716329,LOC107673959 coding downstream 18028 10294206 ~ 10297714 (+)
ldb1a ldb1a,ldb1,LOC107707596,LOC107585322,LOC107673939,LOC108442788 coding downstream 37236 10313414 ~ 10333604 (+)
LOC122357143 NA coding downstream 52966 10329144 ~ 10329279 (+)
prom2 LOC107707565,LOC107588656,LOC107688306,LOC107585354 coding downstream 58497 10334675 ~ 10343979 (+)
nsmce4a LOC107707575,LOC107588653,LOC107688307,LOC107716332,LOC107585317 coding downstream 73610 10349788 ~ 10354314 (+)
G92524 NA non-coding upstream 109928 10164559 ~ 10165656 (+)
G92513 NA non-coding upstream 204801 10068488 ~ 10070783 (+)
LOC122356803 NA non-coding upstream 226142 10044781 ~ 10049442 (+)
G92434 NA non-coding upstream 544582 9730725 ~ 9731002 (+)
G92432 NA non-coding upstream 547617 9724396 ~ 9727967 (+)
G92563 NA non-coding downstream 33059 10309237 ~ 10309776 (+)
G92671 slc18a3,slc18a3a,LOC107708354,LOC107683739,LOC107716340,LOC108442244 non-coding downstream 366378 10642556 ~ 10645237 (+)
G92675 NA non-coding downstream 381330 10657508 ~ 10702103 (+)
LOC122357062 NA non-coding downstream 477055 10753233 ~ 10763691 (+)
G92729 LOC107716350,LOC107673932,LOC107707381,LOC107588636,LOC107585302 non-coding downstream 544764 10820942 ~ 10947919 (+)
LOC122356813 adka,LOC107743514,LOC107666490,LOC107601874,LOC107655429,LOC107725426,LOC100196663 other upstream 25859 10205113 ~ 10249725 (+)
atoh7 atoh7,LOC107726941,LOC107601814,LOC107666420,LOC107743508,LOC107655428,LOC108426756 other upstream 840979 9430178 ~ 9434605 (+)
zgc:153981 zgc:153981,LOC107725455,LOC107666543,LOC107601871,LOC107671561,LOC107552921,LOC108426808 other upstream 1111470 9161517 ~ 9164114 (+)
spef1 zgc:66426,LOC107601866,LOC107725472,LOC107666492,LOC107743614 other upstream 1186463 9080848 ~ 9089121 (+)
fuom fuom,LOC107676595,LOC107666397,LOC107601808 other upstream 1247675 9025943 ~ 9027909 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other downstream 140062 10416240 ~ 10420426 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other downstream 688677 10964855 ~ 10968914 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other downstream 937348 11213526 ~ 11218175 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other downstream 979416 11255594 ~ 11262620 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other downstream 1113207 11389385 ~ 11413515 (+)

Expression


Co-expression Network