G92958


Basic Information

Item Value
gene id G92958
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11514477 ~ 11533930 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU137594
atttttttttttttGACAGTCTCAACATTGGTTTAATGTGAAAAGAAATGTACTTAGAAATGCCACATTGACAACACTTGACCAAATATAAAGTGGAGACAAAGTAAATTATGGAATGAATTACATAAAGACAAATCCAAACAAAAATGTGTGGTCCTTGTAAACTgtttaactaataaataatcacaACCATTCCAAAATTCTAACATATCAAACCGGTTACATATAggtagttattttaaaacttgTATATACTTCTATAGAGCTCTGTCATATTGATGTTTAATATGGGAGTCTGGATTAAGTGCTGGATTAAATATACTCTTATTTCTTGGCTTTGCCCTGTGCTGCCACAGCCTCCATGGCTTTGCGAACAGTTTCCTCGTCTCCAAGGAACTGCATGGGCTTGATGGGCTTCAGGTTCTTATCCAGTTCGTAAAGAATAGGGATGCCTGTGGGCAGATTCAGCTCCATGATGGCCTCCTCAGACATACC

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU137594 True 495 lncRNA 0.37 2 11514477 11533930

Neighbor

gene id symbol gene type direction distance location
antxr1d antxr1d,LOC107673963,LOC107708254,LOC107668779,LOC107588727,LOC107757100,LOC107548602,LOC108263270 coding upstream 6538 11486772 ~ 11507939 (+)
gdf10a gdf10a,LOC107708281,LOC107668782,LOC107588730,LOC107673887,LOC107757113 coding upstream 33481 11477208 ~ 11480996 (+)
ptpn20 ptpn20,LOC107707196,LOC107668813,LOC107673913,LOC107757144,LOC107588696 coding upstream 59766 11426414 ~ 11454711 (+)
si:ch211-223a10.1 si:ch211-223a10.1,LOC107707219,LOC107757147,LOC107673964,LOC107548634,LOC107588731 coding upstream 126284 11379144 ~ 11388193 (+)
lrrc18a NA coding upstream 159273 11351972 ~ 11355204 (+)
tdrd9 tdrd9 coding downstream 7192 11541122 ~ 11557216 (+)
pcnx4 pcnx4,pcnxl4,LOC107707124,LOC107757138,LOC107588690 coding downstream 60235 11594165 ~ 11602678 (+)
ppm1aa ppm1aa,LOC107707101,LOC107588600,LOC107757136,LOC107548624,LOC107673900 coding downstream 73002 11606932 ~ 11621476 (+)
six6a six6a,LOC107588601,LOC107707115,LOC107668781,LOC107743981,LOC107673886,LOC107548626 coding downstream 101725 11635655 ~ 11637883 (+)
mnat1 mnat1,LOC107668823,LOC107707092,LOC107757134,LOC107675563 coding downstream 127657 11661587 ~ 11678612 (+)
G92952 NA non-coding upstream 4589 11509238 ~ 11509888 (+)
G92923 NA non-coding upstream 52361 11414223 ~ 11462116 (+)
G92907 wdfy4,LOC107707224,LOC107757102,LOC107673934 non-coding upstream 145570 11368266 ~ 11368907 (+)
G92767 NA non-coding upstream 310793 11202654 ~ 11203684 (+)
LOC122356274 NA non-coding upstream 492421 11004910 ~ 11022056 (+)
G92968 NA non-coding downstream 9123 11543053 ~ 11558240 (+)
G92974 NA non-coding downstream 32100 11566030 ~ 11618812 (+)
G92984 NA non-coding downstream 94429 11628359 ~ 11628566 (+)
G93001 NA non-coding downstream 193893 11727823 ~ 11728484 (+)
G93006 syt14a,syt14,LOC107668771,LOC107757094,LOC107675522,LOC107548616 non-coding downstream 218009 11751939 ~ 11758609 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other upstream 100962 11389385 ~ 11413515 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other upstream 251857 11255594 ~ 11262620 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other upstream 296302 11213526 ~ 11218175 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other upstream 545563 10964855 ~ 10968914 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 1094051 10416240 ~ 10420426 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other downstream 37730 11571660 ~ 11592600 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other downstream 69767 11603697 ~ 11604852 (+)
LOC122357045 LOC107654926,LOC107705370,LOC107588681,LOC107675516 other downstream 897989 12431919 ~ 12436643 (+)
jag2a jag2a,LOC107654986,LOC107675567,LOC107724379,LOC107585503,LOC107705348,LOC107600569 other downstream 968455 12502385 ~ 12535071 (+)
G93296 rrbp1 other downstream 1037701 12571631 ~ 12575212 (+)

Expression


Co-expression Network