lrrc9 (lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098)


Basic Information

Item Value
gene id lrrc9
gene name lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 11571660 ~ 11592600 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU137640
GAATCAGGCACGTACTGGGGGAGGGTTCTACCTGTAGGGGAGTGGTTAGGGGAGTGGTTAGCTGAAGAGGCTGCGCTGTCATCTTCTGGTTCTGACAGTGTTACTGTGGGAAGACCCTGCTGACCAAAACTTagcacgctctctctctcggaCATGCCCCCTTGGGGAGACACTCTCAAAGGCTGGGACTCTGTTGTAACCGTGATCTTTACAGGACTGGCACTCTGTGGCGTTTCCATCCTACGGTAAGATCGGTAATCTGCCATCTCTTCATCCGAAGGATCCTCCACGTACGGGAATGCATGCTGCCCACCAGCCGACCCCTGACTTTTCACCTCTGTTTCCTCAGATCCAAGGGGGCTCTTCTCCAAGTAGCGACCCAGATCGAAGGGGTCGTGGCTGGATggtttattttccttttcatgAATCTTAGGCTTGAAATCTTGAATGTCATCTTcgtcttcttcatcatcatcttcgtCATCTCCATAGCCAGACATGAGAGGCTGCTGCTTGTTCTTGACATTGCCCACACTACCAAAGTCACAGAGGTCATCCCCCATGTCCATGTAGCTGTAATGGTCAGACTTGTGTGAGCCCTGCAGGGTCGTCTGATGGTCTGAGGGGTCACCTGGGGTCATGCCGATGCCGGAGTCAGTCCCGGTGGGAGCAGGTGGAGAACGGTTGCCCTCTGTAGATgcagtttccatggcaacgCCGCTTCCTTCAAAGGGATGGAATTGTTGCTTGGGCGCGTGCAGATCGTCCCGCATCTCGTCGAAACGGGGCCCTGCGCTCCCAAACATCCcgttcttctcctcctcctcctcgaaCCATTTCCCATCCAAACCCGGCCCCTCGCTCGAATTGGCGGACATGCTTGCAGTGATCGCGCGCAGAGACTTTGTTCGGAAGCGAGAACGACTGTGTGAGATCGCGGGAGAAACCGAAAGATGTGACGCTTAATATGGCCGATCCTGACCGATGCTTCCCGTCTCGCAGCAGCGGAGCCAGTGGGCTTGATGTGTTTGGTTCAGCGTCTCGGAGCTGACGTCACTGTATCTGTGCGGCTCGCGGTTGGCACGGATTTAGGACGGAGAGCGACATTCCGGTTAGAGGACGGTCCGTGTGTCACGGGCGTGGTTCTAGCTACCTCATCACAGTTCACATAACACGCACGCTACATTTAAGCTTTTTTATATACGCTTAATAATACAGTCGGCGATGAATGAAACCGTCTTCGTACGGACTTTTCCATGATTCTTGCGGACAGAAATGACTGAATTCGCTTAATTTGAGCGCGATCATTTTGATTAGCCgttgttaaatatatttctatattgtttgtgattattttaatattttatattttgaatgagcTGTTTGTCGATATTCATCCCCTACCCGGTTCGTTACTAATACCCAGTTTAGTTTTGCATGAATTGAGTAAattgtatgttattttattttatttctttagaatgattagttgatttatttctaaatgctCCACCCCTTACCATTGGTTACTGTGT
>XM_043254959.1
atattgtttgtgattattttaatattttatattttgaatgagcTGTTTGTCGATATTCATCCCCTACCCGGTTCGTTACTAATACCCAGTTTAGTTTTGCATGAATTGAGTAAattgtatgttattttattttatttctttagaatgattagttgatttatttctaaatgctCCACCCCTTACCATTGGTTACTGTGTTGTGTTGTGAGGTTTGGGGGGTGAAAAAGATGTTTTCTGTCTCTAATCGTCAATTTAATTTCGAATGGGtaggctattattattatgatactGTTTAGTTTCCTTTTGTAATTATGCCTGCACGCTAacgtaaattattattttgcataaataaataaaatgtctttttttaaaaataattttattttgtgcaataaagcttttttctagtaaaaatatttgaacactgAGCAATTCTGAAGTCGCCATGCTTCGAGAGGCTGGTGGATGATCCGGCGTTTAGCGCCATCTTCTGGCGGACAACGACACATTCCAACAGGGCTTCCTTAGTACCGACGGGCCACGCTTCCTTAGCAACGGTCTGGTGTAAACATTGCagtaagcaaaataaaaaggaaaatcacTACAAGTGCGGCTCGATAATGGGGGGTTGATATGTTTTCGCTGTTGAAACGTAAGTTTACGCTGAACAGGCGTCGTGCAGCCGTTGAACTTTATGGTGGAGAAAAGGAAAACTGATCTGTTGTAGAGTCAAATCATGCAATGTGAAGGAATTTGACTTGGTCACCTCATCTGCTGGGCTCTGACTATACAACTGGACATACGCAAACAGgGATCATGACGCAGAATGAAAAGCAGAAACTAACTGGAGACGAGGAAATTATAAAAGAGCTGtgtgtttctaatggACTCTGCTATGAGAAGGTGTGTCAGGAGGGGAGTGGTGAGATGGTTCTGGAGATGTTTTTCTCTGGGTTCCCGCGCATGGTgggtctctctctttttcctagATTGTCCAGTCTCACTATCGTAGGCCAGAGCATCAGCTCAGTCCAGGGCCTGGAGCACTGCCCACTACTCAAAGAATTATGGGTAGTGGAGTGCAAACTGAATgaAATCTCTGGCCTGCATAACTGTGTGCATCTGCAGAAATTATTTCTGTATGACAACAACATCCAGAAGATTACAAATGTAGAGATGTTGGTCAACCTTCACATCCTTTGGCTTAATAAGAACCAGATCTCTGTCATCCAGGGACTGAATTCACTTGTAAACCTTAAGGAGTTGAATCTTGCAGATAATGCTATTGAGACTCTTGGTCATTGTCTGGATTCCAACTTCGCTCTCCAAAATCTAAACCTCTCAGGGAACAAAATCAGTTCCTTCAAGGAATTGACCCATCTGGCTCGGCTGCCCCGACTACGGCACCTAAGTCTGAAGGACCCTCAATCCGTTCCAAACCCACTGTGTTCGCTTTATAATTACTACATACATGTCCTATATCACATGCCACACCTGCAGCGCCTAGACACATATGACATATCCAGCAAACATCTCAAAGACACTGCAGAGTCCACAGTGCTTAAGAAAATGATGTATTACACCATGCGGGTACGTTGTGCACAAAGACAGTTTGATGAACTCAAAGCTAAGCTCAGGCAGCAGAGGAAAAACCAGATACAACTACCAGAGGAAAAAATACATGTGCTAACACACATGCTCAGAAATATGGAGTGTGAGCTGTCCCATGTACAATCTGTTGGTAAGAAGTCAGGAGAACCTGAGCTGACCTCTGACTTTTGTAAAGAGCACAGTCATGAGCTAAAACTGCAGCACAAACTGGAAGCTCTTAAAGGCAGACTGAAGTTCTGGGAACGGCGCCTGCAGGAGGTAGAAGCATGTCACCAGCATAATTTGGCTTTGGCCTCAGATAGAAGGGATATGATGGTGCACTGTCTGCTGTTGGAGCTGGAAACCGTGGGGAACATTCGCTTCGAGGAGGGAAACACCGGCGAACCTTGGTTCACATCATGTTTTGATCTATTGCTTTCCCGTTTCTGTGCATGGGATTATAAACCTCACCACATCACTGGCATTAAGATCAATCGAATCATCCGTATCCATAACCGAGCTCTGCGGCAACGCTTCCAGGACAAAGTACACTCTCTGCTCTGCAGACAGGAACCTTCACCCTTCTCACAaAACTATAAACGCTGCATGGAGTATCTGTTCTACCTGCCCGATCCAGAACATTCCTGTGAAAGTGATGAGATACTTCCAATCCTAGAAAACGGGTTTAAAACTGCTGATGCATATAAGGCTTTAGGCAGAGAGAGTGCCATCCCGCTCTCTAACAGTGTGAGCGTGTCTGATCGACTGAGAATGACATTTATGCAGAAGAAGAGTTGCTCAACATCAGGAAGTAGCCCTGGAGACATTCTTCCCTTCAGACATGgTCAGTTGGTGATTTCTAAAGTGTTCCTGGGCCGCAGTGCTGCAGTTAAGGAGGGTCTCCCAATAGACTGTGATCATTACCCTAAAGCAAACTCTGTCTACCTCAGTACCTGCTCTAAAGAGCAAAAGCACACAGCACAAACAGCACCTGACATGCTGTGTCCCTCCAGCTTGCCGGACAGCTGTGACTGTAGACAGCAGCAGAAACTGTGGTACATATTTGACAATGAAATGGTGCTCCCAGAGTACCTTGTAGACTTTGAATATGTGACACAGGACACATCTCAGCCTTCTCCAGACTCCTCGTCTAGTTCTCACTCATCCCTGGCTGATGCCCCATCTGTGTCCCGAGCTGAGCTAGACCTGGATGAGAAGGCATTAAATATGGAACCCATCCTAAAGCCTCTCCCCAAGCTGCTTAGTCTAGATGAGAAATCCATACTGACAGTGGCCAGAGCAAACGTCCTCAGTCAGATCACAGTGCTGAATCTACATGGCAACAGTCTGAATAAACTACCTGAGATTTCTCGACTCACAGCTCTGAAGCAGCTGACCCTCAGCTTCAACGAGTTTACTCATCTGGACGATATTTCACATATGCCAAACCTGGAGTACCTGGATGTTAGTTTTAACCATATTTCTTCTCTGGAGGGTTTGCGTGGGCTTGGCCAACTTATAGAACTGGATGTCCGCTGGAATCAGTTGACTCGAATAAGGGATGACATAAATGTTTTGCGTAAACATGCCCCTGCCCTGCTTCGTCTGGACACACGGCACAATCCTTGGCACAGGAATGAGTGTGTGCGTATGGTGGTTCTTGGTCGGCTAAAGACTCTCACTTATTTGGATGATGCTTTCGTGATGGAGGAAGAAGCAGCTGCTGCCGTTCAAGTGGCTGCTCGATCTAGAATCAACCAGgcaTCTTTGATGGCCCACTCTCGGACTGACAGCGAACGTCCCCGCAGTCTGAGCTTGCTCTCTTCTGCTCACCTGCTCACCCAGATCAGCCCGTCTCCATGGAGACACTCGCAAGAGTCAGGCTGGACCACCAAAATCACAGCCCTGAATCTTGATGGTCTGCGGTTGACCCGGCTCAGTAATCTTGACCGACTGGTGAGTCTACGCTGGGCTTCTTTTGACAATAACGAATTAACTCGAATTGAGGGTCTGGAACACTGTACCCTACTGGAGGAACTTTCCCTTAATAACAACAGCATCAGCAAACTGGAAGGTTTGTGTGCGATGCATCGTCTGACTCGTCTGAGCATTAACAGCAACCACTTACAGTGTTTAGATGGGGATGTTTTGGACCAGCTACCCAaccttcacttcctgtctgtaGAAAGCAACATCATCTCATCTCTGCATGGGCTTCAAAGGTCACGGTCCTTATTCGAGCTGTATGTCGGCAATAATGACATCAGCACTACCAGAGACATATACCACTTAAAGgcaCTGTCTAGTTTAATTATTCTGGATCTGTACGGGAACCCACTTGTAAACAAACTGGAGAACTACAGGATCTACATGGTTTTCCATCTGCCTTTACTCAAAGCACTGGATGGAGTAGCTGTGGAAACGTGTGAATCAGAAACTGCTAAGGACGTGTTTGGAGGGCGGCTCAATGCAGATATGGTGGCTGAGAAGCTGGGCCATACCAACTACAGAGACCTGTCAGAACTCAACCTCCAGTCCAGCTCAGTCAGAATGGTGGATCTCGCTCCTGCTGATTTGTTCAGTAATTTACACAGTATTAATCTAGATCACAATAACCTCACCTCATTCAGCGGTCTCATCTTCCTGCCTAACGTTAAGGTGTTGTCTCTGAACTATAACCACATTGAATCAATTTTACCACGTCAAAAAGCTCAAAGTCACATGAACAACAAGCAGATTCTCTATCATAAAGTCAGTTCCAGTGGATATGGGCAGCAGAACAGCAGGCCCAGCAGAGAGGGATTAACTGATAACCTGGAGCCTCTGATGTCCAGTTTGGAGGTTTTACATTTAGGTTATAATGGTATATCCAACTTGATCAATCTACAGATCAGCCGACTCACTAACCTCAGAGCGCTGTTCCTACAAGGGAATGATATCAGTCAGGTAGATGGATTGGATGGTTTGCAGAGACTACGTGAGTTGGTTCTGGATCGAAATCGAATTAAATCTTTGAGTGAGAACTCATTCTGTGGACAGGGAGTTCTGCTGGATTTGCACCTGGCAGAGAATCGCATCCGTGAACTGAACCACCTTCAGCCTCTCACTGAGCTCCGGAGACTGTTCTTAGACATGAACAAAATACTGGACATTTCAGAGCTGGAGAAACTGGAGGTGGTTCCTTCCCTCACGGAACTGTCTGTAGTGGGCAACccaGTGGCTCGGCGATCAATGCACAGACCAGCAGTGGTACTGCATCTGTCTACACTGCAGGTTCTGGATGGCATGACAGTCACCCTGGAAGAAAGAACCAAAGCAGAGCTTTTAAATAATGAAGCACAGGGTTCTAGCTCAGGTGGTGAAGTGACTTTACCCGGTTTGGTACCATTGGTGACCCGACCGGCTCCTTTAAGAGGGGCAGGAATCCACTCACTACCTGATCAGCAAGACGACACACATGATACCAGCAGATATAAGAAACAGAAAGCAGTCATCTCTCTCTTGCGTGGAGTTCAGAGTGACTTTAACTTCAGGCAGATCAGAGGGTCTTCTAGCCACTACATGACAGCATTGCAGCAAACGGGATACAGAGTTCTCTCCACTTTCCCTAACGCTGAGTCTGAGACCAGGTACCAGTGTCACAATGTACCCAgacctcctccacctcctcctctgtAATGCAAAGTCATAGACACACTGTGTGTGTCATTCATTTCAGCTTCGCtcttgtgtgttgtttttcatctttggaTCTTATAGGACTTAATttgaccatttattttttttggaattgtGTCAGTATCAAagatattaaatttatattttcta

Function

symbol description
lrrc9 Orthologous to human LRRC9 (leucine rich repeat containing 9).

NR:

description
PREDICTED: leucine-rich repeat-containing protein 9-like isoform X3

GO:

id name namespace
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137640 False 1535 TUCP 0.50 2 11571660 11577859
XM_043254959.1 True 5418 mRNA 0.45 33 11577662 11592600

Neighbor

gene id symbol gene type direction distance location
tdrd9 tdrd9 coding upstream 14444 11541122 ~ 11557216 (+)
mettl18 mettl18,LOC107707167,LOC107588607,LOC107668810,LOC107548629,LOC107673950 coding upstream 38265 11531855 ~ 11533395 (+)
antxr1d antxr1d,LOC107673963,LOC107708254,LOC107668779,LOC107588727,LOC107757100,LOC107548602,LOC108263270 coding upstream 63721 11486772 ~ 11507939 (+)
gdf10a gdf10a,LOC107708281,LOC107668782,LOC107588730,LOC107673887,LOC107757113 coding upstream 90664 11477208 ~ 11480996 (+)
ptpn20 ptpn20,LOC107707196,LOC107668813,LOC107673913,LOC107757144,LOC107588696 coding upstream 116949 11426414 ~ 11454711 (+)
pcnx4 pcnx4,pcnxl4,LOC107707124,LOC107757138,LOC107588690 coding downstream 1565 11594165 ~ 11602678 (+)
ppm1aa ppm1aa,LOC107707101,LOC107588600,LOC107757136,LOC107548624,LOC107673900 coding downstream 14332 11606932 ~ 11621476 (+)
six6a six6a,LOC107588601,LOC107707115,LOC107668781,LOC107743981,LOC107673886,LOC107548626 coding downstream 43055 11635655 ~ 11637883 (+)
mnat1 mnat1,LOC107668823,LOC107707092,LOC107757134,LOC107675563 coding downstream 68987 11661587 ~ 11678612 (+)
slc38a6 LOC107548621,LOC107668833,LOC107588598,LOC107707073,LOC107757131,LOC107675562 coding downstream 88751 11681351 ~ 11690241 (+)
G92968 NA non-coding upstream 13420 11543053 ~ 11558240 (+)
G92958 NA non-coding upstream 37730 11514477 ~ 11533930 (+)
G92965 NA non-coding upstream 42580 11525357 ~ 11529080 (+)
G92962 rrp12 non-coding upstream 52317 11518620 ~ 11519343 (+)
G92952 NA non-coding upstream 61772 11509238 ~ 11509888 (+)
G92984 NA non-coding downstream 35759 11628359 ~ 11628566 (+)
G93001 NA non-coding downstream 135223 11727823 ~ 11728484 (+)
G93006 syt14a,syt14,LOC107668771,LOC107757094,LOC107675522,LOC107548616 non-coding downstream 159339 11751939 ~ 11758609 (+)
G93113 NA non-coding downstream 214428 11807028 ~ 11807246 (+)
G93153 kcns3a,LOC107681537,LOC107588718,LOC107757122,LOC107708176,LOC107585531,LOC107675527 non-coding downstream 485037 12077637 ~ 12079902 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other upstream 158145 11389385 ~ 11413515 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other upstream 309040 11255594 ~ 11262620 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other upstream 353485 11213526 ~ 11218175 (+)
eif4ebp2 eif4ebp2,LOC107668794,LOC107588631,LOC107716353,LOC107564345,LOC107707337,LOC107673927 other upstream 602746 10964855 ~ 10968914 (+)
ly6pge si:ch73-28h20.1,LOC107716297,LOC107673896,LOC107585320,LOC105890420,LOC106578825 other upstream 1151234 10416240 ~ 10420426 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other downstream 11097 11603697 ~ 11604852 (+)
LOC122357045 LOC107654926,LOC107705370,LOC107588681,LOC107675516 other downstream 839319 12431919 ~ 12436643 (+)
jag2a jag2a,LOC107654986,LOC107675567,LOC107724379,LOC107585503,LOC107705348,LOC107600569 other downstream 909785 12502385 ~ 12535071 (+)
G93296 rrbp1 other downstream 979031 12571631 ~ 12575212 (+)
mgme1 mgme1,LOC107675546,LOC107654997,LOC107585523 other downstream 994286 12586886 ~ 12588998 (+)

Expression


Co-expression Network