G93166 (LOC107681535,LOC107706968,LOC107588687,LOC107675558)


Basic Information

Item Value
gene id G93166
gene name LOC107681535,LOC107706968,LOC107588687,LOC107675558
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12098694 ~ 12099226 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU137864
AGATGTTAGTTTTTCGATCACTCCGTATGTCTCCACATAAAACACATGGTCCTCAAGAGGCTGACTGGCCATCTGTTTGAGAGACCGCATATCTGCTCTGTCCACTCCGACAGCATATATTTCAATCCCAGAAGCCCTTGCTGCTGCTGCCACCTCTTCAACTTTATCTTGCGGCCTCCCATCGGTCACAATGATGGCCACCTTACCGATGTTCTTTTTTAATGGCCGGGCCCCAGCGATCTCTGTAAAAACCTGCTCTATGGTGGTTTTGATAGCTTGGCCAGTCATAGTTCCTGTTGAGAGGGGATCGATACGAGAGAAGGCCTGCTTGACCTCTGCCTTACTGAAGTACTTTTTCAGCAGGAACTCAATGTTGACGGTGCTGGCGTAGTTGACCAGGGCCACTCGTGTGGCATCGGATCCAATATCAAGAGAATCAACCATTTCAGAGAGGAAGATTTTGACCTTCTCGAACTCTGCAGGACGGACGCTACGAGAACTGTCAATGATAAAAACCAGGTCTAGAGGACGGC

Function

NR:

description
PREDICTED: matrilin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU137864 True 533 lncRNA 0.49 1 12098694 12099226

Neighbor

gene id symbol gene type direction distance location
rdh14a rdh14a,rdh14,LOC107757127,LOC107675576,LOC107585474,LOC107668816 coding upstream 66798 12029451 ~ 12031896 (+)
LOC122357022 nt5c1ba,LOC107668815,LOC107707024,LOC107588591,LOC107585516 coding upstream 69535 12024402 ~ 12029159 (+)
LOC122357024 NA coding upstream 74403 12022560 ~ 12024291 (+)
osr1 osr1,LOC107588719,LOC107757107,LOC107668777,LOC107548611,LOC107675531 coding upstream 216817 11875804 ~ 11881877 (+)
hif1aa LOC107757129,LOC107675566,LOC107707991,LOC107548618,LOC107588596,LOC107668801 coding upstream 374334 11712438 ~ 11724360 (+)
mtres1 LOC107706999,LOC107757125,LOC107588589,LOC107681546,LOC107675559,LOC107585479 coding downstream 2747 12101973 ~ 12104666 (+)
sobpa sobpa,LOC107706905,LOC107681548,LOC107757118,LOC107585480,LOC107588585,LOC107675556 coding downstream 45412 12144638 ~ 12172343 (+)
slc66a3 pqlc3,LOC107706924,LOC107681540,LOC107675554,LOC107757120 coding downstream 81021 12180247 ~ 12183265 (+)
arg2 arg2,LOC107675544 coding downstream 179330 12278556 ~ 12285045 (+)
rdh12 rdh12,rdh11,LOC107705384,LOC107585486,LOC107588583,LOC107724212,LOC107675518,LOC108439707 coding downstream 194979 12294205 ~ 12298725 (+)
G93153 kcns3a,LOC107681537,LOC107588718,LOC107757122,LOC107708176,LOC107585531,LOC107675527 non-coding upstream 18792 12077637 ~ 12079902 (+)
G93113 NA non-coding upstream 291448 11807028 ~ 11807246 (+)
G93006 syt14a,syt14,LOC107668771,LOC107757094,LOC107675522,LOC107548616 non-coding upstream 340085 11751939 ~ 11758609 (+)
G93001 NA non-coding upstream 370210 11727823 ~ 11728484 (+)
G92984 NA non-coding upstream 470128 11628359 ~ 11628566 (+)
G93167 NA non-coding downstream 380 12099606 ~ 12100355 (+)
G93169 LOC107588588,LOC107706947,LOC107681544,LOC107757121 non-coding downstream 5507 12104733 ~ 12107484 (+)
G93182 NA non-coding downstream 22713 12121939 ~ 12178466 (+)
G93191 NA non-coding downstream 81643 12180869 ~ 12184800 (+)
G93190 rock2,LOC107588686,LOC107681539,LOC107707968 non-coding downstream 86842 12186068 ~ 12189038 (+)
G92977 dhrs7,LOC107588602,LOC107548599,LOC107757139 other upstream 493842 11603697 ~ 11604852 (+)
lrrc9 lrrc9,LOC107707153,LOC107588606,LOC107668786,LOC107757140,LOC107668789,LOC107708221,LOC107588691,LOC107673872,LOC107757098 other upstream 506094 11571660 ~ 11592600 (+)
arhgap22 arhgap22,LOC107668831,LOC107708000,LOC107673870,LOC107588697,LOC108443345 other upstream 685179 11389385 ~ 11413515 (+)
cxcl12a cxcl12a,LOC107588617,LOC107707253,LOC107548639,LOC107673912,LOC107757152 other upstream 836074 11255594 ~ 11262620 (+)
G92772 LOC107588620,LOC107707271,LOC107707282 other upstream 880519 11213526 ~ 11218175 (+)
LOC122357045 LOC107654926,LOC107705370,LOC107588681,LOC107675516 other downstream 332693 12431919 ~ 12436643 (+)
jag2a jag2a,LOC107654986,LOC107675567,LOC107724379,LOC107585503,LOC107705348,LOC107600569 other downstream 403159 12502385 ~ 12535071 (+)
G93296 rrbp1 other downstream 472405 12571631 ~ 12575212 (+)
mgme1 mgme1,LOC107675546,LOC107654997,LOC107585523 other downstream 487660 12586886 ~ 12588998 (+)
tasp1 tasp1,LOC107705405,LOC107654993,LOC107600565,LOC107662811,LOC107585512,LOC107739887 other downstream 1035247 13134473 ~ 13158440 (+)

Expression


Co-expression Network