tmem234 (tmem234,LOC107675523,LOC107576456)


Basic Information

Item Value
gene id tmem234
gene name tmem234,LOC107675523,LOC107576456
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 12429197 ~ 12430778 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU138169
GTTCGTTAAAAGACGCGGTGGTTTACTTGCGGAACAGAAATGGTGTCAACAAGTGAAGTGTTTTGTCTGTTGTTGGTCGCGATCTTGTGGGGAGGCACAAACCCATTCCTGAAAAAAGGCACGGAGGGCATTGAAGGCGTACAGAAGGACAACAAACTCCTCCAGTTTCTGGCTGAGGTCAAATTTCTGTTTCTCAATACCAGgATCTGTCTCTGGCTGTTCCCATGGTGAACTCCCTCACATTTCTGTTCACGTTACTAATGGGTAAATTGCTTGGAGAAGAGTTCGGAGGAAAGAGAGCTGTGCTGGGGATGTTACTCATCATGTGTGGAGTGACCGTGTGTGTACTGAGTTCTGTCTCTGAGGCAGACGGCGCAGGAGCCCGCAACTCAAGTGATCTTTGAAATGTGCCCCTGGACTGCTCCGGCCATGTGATCACACCTCGCACACACATTCATCTGACACAATATCTGTGCTGCTTTATTTTCAGTATGTGCTGTGATTTTGTGCTAAGAGGTGATGGTTGACTTTAAATTTGTACTTGAACCATGTTGGTGAAATCCAAATGTTTTGCACTTTAAATGCAACTGTGGAAAGAGTAGCTTTTCAGTGTATGCGAAATGTGAAACATACGATATATTTGtataaactgtattattaactgatatttatatggaTTTGTATTAATAATGTGAAGGTGCCcagtgtttaaatacatttattttgaacttttacaTTCAGATGTCTTATTTTGTTaaacaga
>TU138170
GTTCGTTAAAAGACGCGGTGGTTTACTTGCGGAACAGAAATGGTGTCAACAAGTGAAGTGTTTTGTCTGTTGTTGGTCGCGATCTTGTGGGGAGGCACAAACCCATTCCTGAAAAAAGGCACGGAGGGCATTGAAGGCGTACAGAAGGACAACAAACTCCTCCAGTTTCTGGCTGAGGTCAAATTTCTGTTTCTCAATACCAGggtgtgtttttatcattcctTTATGCGCATATATAACAAGTGTTTGTGAGAAATAGACTttgtaattacaattattttatctatttgtttttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagatcccATTCCTGTTGAACCAAAGTGGATCGTTAGTGTTCTACCTCACTCTTGCTTCTACAGATCTGTCTCTGGCTGTTCCCATGGTGAACTCCCTCACATTTCTGTTCACGTTACTAATGGGTAAATTGCTTGGAGAAGAGTTCGGAGGAAAGAGAGCTGTGCTGGGGATGTTACTCATCATGTGTGGAGTGACCGTGTGTGTACTGAGTTCTGTCTCTGAGGCAGACGGCGCAGGAGCCCGCAACTCAAGTGATCTTTGAAATGTGCCCCTGGACTGCTCCGGCCATGTGATCACACCTCGCACACACATTCATCTGACACAATATCTGTGCTGCTTTATTTTCAGTATGTGCTGTGATTTTGTGCTAAGAGGTGATGGTTGACTTTAAATTTGTACTTGAACCATGTTGGTGAAATCCAAATGTTTTGCACTTTAAATGCAACTGTGGAAAGAGTAGCTTTTCAGTGTATGCGAAATGTGAAACATACGATATATTTGtataaactgtattattaactgatatttatatggaTTTGTATTAATAATGTGAAGGTGCCcagtgtttaaatacatttattttgaacttttacaTTCAGATGTCTTATTTTGTTaaacaga
>XM_043254688.1
CAGATCTAAAGCTACTATGGATAGACAAAAGCCGCTTGAAATGTTGCCTAAACCAATCAGTCTGAGTTAGACATCAACAGGAAGAAGAAACTGTTCGTTAAAAGACGCGGTGGTTTACTTGCGGAACAGAAATGGTGTCAACAAGTGAAGTGTTTTGTCTGTTGTTGGTCGCGATCTTGTGGGGAGGCACAAACCCATTCCTGAAAAAAGGCACGGAGGGCATTGAAGGCGTACAGAAGGACAACAAACTCCTCCAGTTTCTGGCTGAGGTCAAATTTCTGTTTCTCAATACCAGgatcccATTCCTGTTGAACCAAAGTGGATCGTTAGTGTTCTACCTCACTCTTGCTTCTACAGATCTGTCTCTGGCTGTTCCCATGGTGAACTCCCTCACATTTCTGTTCACGTTACTAATGGGTAAATTGCTTGGAGAAGAGTTCGGAGGAAAGAGAGCTGTGCTGGGGATGTTACTCATCATGTGTGGAGTGACCGTGTGTGTACTGAGTTCTGTCTCTGAGGCAGACGGCGCAGGAGCCCGCAACTCAAGTGATCTTTGAAATGTGCCCCTGGACTGCTCCGGCCATGTGATCACACCTCGCACACACATTCATCTGACACAATATCTGTGCTGCTTTATTTTCAGTATGTGCTGTGATTTTGTGCTAAGAGGTGATGGTTGACTTTAAATTTGTACTTGAACCATGTTGGTGAAATCCAAATGTTTTGCACTTTAAATGCAACTGTGGAAAGAGTAGCTTTTCAGTGTATGCGAAATGTGAAACATACGATATATTTGtataaactgtattattaactgatatttatatggaTTTGTATTAATAATGTGAAGGTGCCcagtgtttaaatacatttattttgaacttttacaTTCAGATGTCTTATTTTGTTaaacagatgaaataaaaaaaaaaatgaatctc
>XR_006252291.1
CAGATCTAAAGCTACTATGGATAGACAAAAGCCGCTTGAAATGTTGCCTAAACCAATCAGTCTGAGTTAGACATCAACAGGAAGAAGAAACTGTTCGTTAAAAGACGCGGTGGTTTACTTGCGGAACAGAAATGGTGTCAACAAGTGAAGTGTTTTGTCTGTTGTTGGTCGCGATCTTGTGGGGAGGCACAAACCCATTCCTGAAAAAAGGCACGGAGGGCATTGAAGGCGTACAGAAGGACAACAAACTCCTCCAGTTTCTGGCTGAGGTCAAATTTCTGTTTCTCAATACCAGgATCTGTCTCTGGCTGTTCCCATGGTGAACTCCCTCACATTTCTGTTCACGTTACTAATGGGTAAATTGCTTGGAGAAGAGTTCGGAGGAAAGAGAGCTGTGCTGGGGATGTTACTCATCATGTGTGGAGTGACCGTGTGTGTACTGAGTTCTGTCTCTGAGGCAGACGGCGCAGGAGCCCGCAACTCAAGTGATCTTTGAAATGTGCCCCTGGACTGCTCCGGCCATGTGATCACACCTCGCACACACATTCATCTGACACAATATCTGTGCTGCTTTATTTTCAGTATGTGCTGTGATTTTGTGCTAAGAGGTGATGGTTGACTTTAAATTTGTACTTGAACCATGTTGGTGAAATCCAAATGTTTTGCACTTTAAATGCAACTGTGGAAAGAGTAGCTTTTCAGTGTATGCGAAATGTGAAACATACGATATATTTGtataaactgtattattaactgatatttatatggaTTTGTATTAATAATGTGAAGGTGCCcagtgtttaaatacatttattttgaacttttacaTTCAGATGTCTTATTTTGTTaaacagatgaaataaaaaaaaaaatgaatctc

Function

symbol description
tmem234 Acts upstream of or within glomerular filtration and pronephric glomerulus development. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM234 (transmembrane protein 234).

NR:

description
transmembrane protein 234

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138169 False 763 lncRNA 0.42 4 12429222 12430686
TU138170 True 979 lncRNA 0.38 4 12429222 12430686
XM_043254688.1 False 941 mRNA 0.41 5 12429197 12430778
XR_006252291.1 False 880 transcript 0.41 4 12429197 12430778

Neighbor

gene id symbol gene type direction distance location
nusap1 nusap1,LOC107585493,LOC107724270 coding downstream 29669 12395781 ~ 12399528 (-)
rtf1 rtf1,LOC107655008,LOC107588567 coding downstream 37448 12379697 ~ 12391749 (-)
golga5 golga5,LOC107588574,LOC107705390,LOC107585491 coding downstream 49980 12373606 ~ 12379217 (-)
trip11 trip11,LOC107655016,LOC107588575,LOC107585490,LOC107675555 coding downstream 56206 12354697 ~ 12372991 (-)
fbln5 fbln5,LOC107585489,LOC107724235,LOC107588577,LOC107655017,LOC107705389,LOC107675578 coding downstream 77671 12341913 ~ 12351526 (-)
LOC122356084 LOC107705397,LOC107654925,LOC107588565,LOC107675586 coding upstream 10261 12441039 ~ 12444878 (-)
btbd6a btbd6a,LOC107724364,LOC107588564,LOC107705400,LOC107655006,LOC107585501 coding upstream 27093 12457871 ~ 12461979 (-)
rrbp1a rrbp1,LOC107705351,LOC107654983,LOC107585504,LOC107675545 coding upstream 129380 12560158 ~ 12575184 (-)
snx5 snx5,LOC107654994,LOC107705401,LOC107724504 coding upstream 149370 12580148 ~ 12586465 (-)
si:dkey-76k16.6 LOC107654998,LOC107585507,LOC107724435,LOC107675547,LOC107577850,LOC107600570 coding upstream 158166 12588944 ~ 12591353 (-)
LOC122356854 NA non-coding downstream 22264 12401671 ~ 12406933 (-)
LOC122357111 NA non-coding downstream 182257 12121940 ~ 12246940 (-)
G93315 NA non-coding downstream 262299 12114926 ~ 12166898 (-)
G93148 NA non-coding downstream 387268 12041695 ~ 12041929 (-)
G93144 NA non-coding downstream 392379 12036612 ~ 12036818 (-)
G93392 jag2a,LOC107654986,LOC107705348,LOC107724379,LOC107675567,LOC107600569,LOC107585503 non-coding upstream 101203 12531981 ~ 12533886 (-)
G93394 NA non-coding upstream 103208 12533986 ~ 12535068 (-)
G93460 NA non-coding upstream 674301 13105079 ~ 13105684 (-)
G93470 NA non-coding upstream 726152 13156930 ~ 13158437 (-)
G93471 NA non-coding upstream 731367 13162145 ~ 13162370 (-)
vti1b vti1b,LOC107655020,LOC107705385,LOC107724223,LOC107675543 other downstream 135603 12278454 ~ 12293594 (-)
utp25 diexf,LOC107668835,LOC107707040,LOC107675582,LOC107757128 other downstream 630165 11771428 ~ 11799032 (-)
six1a six1a,six1,LOC107588725,LOC107675533,LOC107708210,LOC107668775,LOC108434988 other downstream 781162 11643930 ~ 11648035 (-)
zdhhc16a zdhhc16,zdhhc16a,LOC107708229,LOC107668773,LOC107673955,LOC107548628 other downstream 896740 11525403 ~ 11532457 (-)
rassf4a LOC107668802,LOC107588618,LOC107707254,LOC107564351,LOC107673909,LOC107757153 other downstream 1210212 11200552 ~ 11218985 (-)
LOC122356414 NA other upstream 126299 12557077 ~ 12597302 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other upstream 879174 13309952 ~ 13325051 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other upstream 1089635 13520413 ~ 13558834 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other upstream 1133644 13564422 ~ 13568025 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other upstream 1262248 13693026 ~ 13718314 (-)

Expression


Co-expression Network