G93562


Basic Information

Item Value
gene id G93562
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 13579527 ~ 13675111 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU138456
gAAAGTGAatgtatatttaacatttatattacatcaACACAAAGCAACACAAAAAAGACCTGCTTAATTTGTCACACTTTATTACAAACATCCCTtgacttttcaaatatttgtaaaaggAATACCAAGAAAACAGTAACAACAAAACAAGTAATCAATTAGTCAAGCATTAGCATATTACAGTCTTCTAGTTCACCAACTACACTTGAACCACACATTGGCTTATGACATCATTTTGACACAGtgagaattattattaaaatgaaagcttgCCAACAAACCACTGCATTCACTGCAAAAATCCTTTTCAAGACtagattttttgtcttgtttacagccaaaatatctaagacaaaaaaaaatctagacttgaaaaggattttttttgcagtgttaatGTATGATCAAATTGTTGCTACTGACAGGTTTAGTAATGCTTGCTAACTGCAAGTCAATGACACTGTCTCTACATTCGCTTACAGTTCCATCCAGGATATGACAACACCTGGCTTAAAgcaaaaacactaaatgcaaAGGTCAACGGAAAagacaaatcaaaaaaatttaaactgaataaattaataaataataaacatttattgactgaaaaaaatactaatagagaaaaagatgcattaagtGCAGGAGGGAGAAGTTTAAAATCTGTTTGACTACTATTTTGTAACATCCTCCTTTGTGATTATACtcagtttttagtttagttcagcTGCATTGGCATGACAACTGAAGAATAGCATCACCAAATGATATATTCTTACACACTTTCATTTATGTAAGCTTACATAACTGTTCAAAATGCACACCAGTCTCTATGAGGCAGGAGGAAATGTACAgtgctactttaaaaaaaaaaaaagaaaaaaaagaaaagaaattggTGCTTTTACTTCATACACATATTGTAACATTTACCAACGTTACATGTGTACACATTTCAAACAGATTACtgctaaaattgtaaaatgctaGTAGTACAATAAATGCAGTGCAAGCAGTGCAGAAAACTGCTTTATATTGTGCTATAACAATCCATACTGCACTCAAACAAGCGAAAACTGAAAACTGTACAAGAACATTATAGATGCAGGTCAGCGATACCTGCAATAAAGTTCCCCTTAAATATTAAGtgtattcaaaaataataattaaaaaaaaaaaagttaaaatagtaaaatattctAGTTATTTCATAACTAGATGATTGTACCTATTGCTACATAAACTGTGTTTTAATTCTCTGTCCTCTACAAACAATCCCAAACATTCAGAGCAAACAAAAATTCAGGTTTCAGTTAGCTTTGCCTTTTCTCTTCACCAGAAAGTGGCaccattctgaaaaacagataaCGAATTTATTATAAGGGATGAAACAAAAGCAAGAAAACTTGCATCACATCATACCATACATGTTAGATCAAAATTAATCAAGGTTGAAATAATTTACCcagaaaatgattaaataatgaacaaaagtgttaaataaaaaaaacaacaaaaaaaacaacaacagttttaCCCAATATGTGTGTTACAGTATGTAATGTGTAGAATTGTACCGTGGTAATACTATTTTTATGATGTACAGAGTTGCTGCCTACAGTATATAGATCGTTCCAAATCggtcatttcatttcaattagaATGCTGCCTTAAAAGGCGCCGTCTATGTAGGCAGCAAAAAGCAAatcagctcactaggttttggaagaGAGCCTTTGGAcgtttctcaaaagaaagactGCATCCTCTGGAGGTCGCATTTGGTCGCATAAAGATGatcttattttagaatattaacaGTTAAAATTTTACCATTAATCTTAATAAGGTGTAACTTCTTGTAGTATGCTTATGACTTGTGAATATAATGCTcagttaactgaaataagccAGACCTGATGACGTATGCAGCCTACAAATGCGTCCCCTGGAGGATGCAGCCTTCCGTTTGAGAAacggactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagtctggTAGTGtctcaaaacctagtgagctctCTATCTGGACAGCATTTTTGAGACGTTCAGCACGCTCAAAAATGCTGCCTAGGTAGGCATCTCACTTTGTTTTAAGACAGCGCCTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138456 True 2172 lncRNA 0.34 2 13579527 13675111

Neighbor

gene id symbol gene type direction distance location
LOC122356824 LOC107705409,LOC107600568,LOC107654911,LOC107683712 coding downstream 173984 13390572 ~ 13405543 (-)
btbd3b btbd3b,LOC107654989,LOC107705408,LOC107585513,LOC107739865,LOC107679136,LOC107600567 coding downstream 294905 13275699 ~ 13284622 (-)
sptlc3 sptlc3,LOC107654988,LOC107600566,LOC107662809,LOC107739864,LOC107705357 coding downstream 375295 13181337 ~ 13204232 (-)
ism1 ism1,LOC107654990,LOC107739863,LOC107705406,LOC107662810 coding downstream 400074 13166439 ~ 13179453 (-)
kif16bb kif16bb,LOC107654912,LOC107600573 coding downstream 449815 13097691 ~ 13129712 (-)
erlec1 erlec1,LOC107654972,LOC107679899 coding upstream 4176 13679287 ~ 13684104 (-)
LOC122356826 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 coding upstream 52631 13727742 ~ 13735822 (-)
LOC122356402 mycla,LOC107680680,LOC107739875,LOC107553198,LOC107576479,LOC107654967 coding upstream 64538 13739649 ~ 13743024 (-)
LOC122356831 erlec1,LOC107654972,LOC107679899 coding upstream 171730 13846841 ~ 13852454 (-)
LOC122356415 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 coding upstream 183719 13858830 ~ 13884172 (-)
G93513 NA non-coding downstream 231642 13347401 ~ 13347885 (-)
LOC122356420 NA non-coding downstream 306386 13271278 ~ 13273141 (-)
LOC122356418 NA non-coding downstream 354991 13208410 ~ 13224536 (-)
G93472 NA non-coding downstream 416800 13162489 ~ 13162727 (-)
G93471 NA non-coding downstream 417157 13162145 ~ 13162370 (-)
G93855 NA non-coding upstream 10836 13685947 ~ 13688626 (-)
G93879 NA non-coding upstream 85935 13761046 ~ 13930294 (-)
G93905 NA non-coding upstream 512428 14187539 ~ 14189904 (-)
G94003 NA non-coding upstream 1197321 14872432 ~ 14873014 (-)
G94016 NA non-coding upstream 1305885 14980996 ~ 14995700 (-)
srd5a2b srd5a2b,LOC107739895,LOC107654923,LOC107683892,LOC107705374,LOC107602938 other downstream 11502 13564422 ~ 13568025 (-)
LOC122356403 jag1,jag1b,LOC107739890,LOC107602913,LOC107655002,LOC107585528,LOC107654982,LOC107602937,LOC107739866,LOC107585514,LOC107705359,LOC107683089,LOC107683730 other downstream 20693 13520413 ~ 13558834 (-)
LOC122356823 LOC107654911,LOC107705409,LOC107600568,LOC107683712 other downstream 254476 13309952 ~ 13325051 (-)
LOC122356414 NA other downstream 982225 12557077 ~ 12597302 (-)
tmem234 tmem234,LOC107675523,LOC107576456 other downstream 1148749 12429197 ~ 12430778 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other upstream 17915 13693026 ~ 13718314 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other upstream 223147 13898258 ~ 13904702 (-)
G93875 LOC107680680,LOC107739875,LOC107576479,LOC107553198,LOC107705377,LOC107654967 other upstream 235228 13910339 ~ 13911837 (-)
LOC122356235 LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922 other upstream 404421 14079532 ~ 14082790 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other upstream 485212 14160323 ~ 14164414 (-)

Expression


Co-expression Network