G93820


Basic Information

Item Value
gene id G93820
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14614225 ~ 14615043 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU138824
TTCAAAAGCAGCTTTAATGCAATATAGAAAAGTAATAGTATCAGTAAGGCCAGCtttaaatatcaaacaaatcCAAATTCTGTATGATATTCAAAgacacaaatcattttaattacattctCTTGCTTTTATACCAAAAGCTGATACCCTGgtattttacaaaacacaaaatatcttgataaaaagaaatgttatattcaatcacagtatattttaattgcacatgcacacaaatacaGAAGTTTTTATTTTGGCACAAGCTCTTTCATCTCCAGCAAATTTATCTctgtctcttcctcttcttcacatccatcatcatcatcattatcatcatcatcatcatcatgtgaAGGTGGACCCTTGGAACGAGAGAACAAATCTGCAGCTCCACCTATTACAGCACCTGCTGCTCCACCCACAGACGCCACGACTGCTGTCGCACATGTAGACAGTCCAGCAGCACTGCAGACTGGAGCACAGCGACCAAACTTCCCGCGGCCACACCGCCACCGTTGGCGATGGCAGCGGATGACATCATGCTGGCAGCCAGAGAACCTCCTGCTATACCAGCAGATGTGAATCCAGCCATGGTGAGGGCCACCGGGGCCAGTGCAACCGTACCAACTAATgcaatacataaacacaaacaattatCTTGCGTACAACTGcgctttcatttaaagcaaacaaTCTTGAGAACACACTTACCTGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138824 True 714 lncRNA 0.42 2 14614225 14615043

Neighbor

gene id symbol gene type direction distance location
gphb5 gphb5,LOC104954562 coding upstream 126725 14485066 ~ 14487500 (+)
esr2b LOC107736782,LOC107683586 coding upstream 221038 14377594 ~ 14393187 (+)
tmx1 tmx1,LOC107654918,LOC107602932,LOC107736746,LOC107683560,LOC107705366 coding upstream 269364 14339891 ~ 14344861 (+)
atl1 atl1,LOC107705445,LOC107602974,LOC107736665,LOC107682422,LOC107553217 coding upstream 337786 14268377 ~ 14276439 (+)
dmac2l atp5s,LOC107705443,LOC107602971,LOC107654946,LOC107736634,LOC107553216 coding upstream 378192 14232374 ~ 14236033 (+)
phf3 LOC107665590,LOC107726593,LOC107602981,LOC107736851,LOC107683665,LOC107553234 coding downstream 5122 14620165 ~ 14630849 (+)
zgc:171579 zgc:171579,LOC107665586,LOC107568696,LOC107736860,LOC107747305,LOC107579559,LOC107664312 coding downstream 224739 14839782 ~ 14842432 (+)
adgrb3 adgrb3,LOC107664175,LOC107665593,LOC107736840,LOC107747274 coding downstream 258872 14873915 ~ 15011010 (+)
zgc:172136 LOC107665601,LOC107601056,LOC107747271,LOC107664217,LOC107736845 coding downstream 663317 15278360 ~ 15295194 (+)
golga7bb golga7bb,LOC107728443,LOC107702732,LOC107665585,LOC103368019,LOC108247940 coding downstream 966825 15581868 ~ 15607881 (+)
G93819 NA non-coding upstream 2225 14607396 ~ 14612000 (+)
G93840 syt16,LOC107683639,LOC107553223 non-coding upstream 29748 14582319 ~ 14584477 (+)
G93839 sgpp1,LOC107726595,LOC107602978,LOC107683631 non-coding upstream 37895 14575380 ~ 14576330 (+)
G93836 NA non-coding upstream 44528 14569155 ~ 14569697 (+)
G93835 NA non-coding upstream 45312 14568325 ~ 14568913 (+)
G93966 NA non-coding downstream 63356 14678399 ~ 14678599 (+)
G93978 NA non-coding downstream 397507 15012550 ~ 15012780 (+)
G94091 slc35f3b,slc35f3,LOC107601026,LOC107747268,LOC107665565 non-coding downstream 709004 15324047 ~ 15329518 (+)
G94101 NA non-coding downstream 815255 15430298 ~ 15434168 (+)
G94104 NA non-coding downstream 819419 15434462 ~ 15453608 (+)
frmd6 frmd6,LOC107654939,LOC107683538,LOC107736757,LOC107726597 other upstream 244668 14354115 ~ 14369557 (+)
gmfb gmfb,LOC107705437,LOC107553212,LOC107602964,LOC102779377 other upstream 425232 14185315 ~ 14188993 (+)
G93613 NA other upstream 704622 13739607 ~ 13909603 (+)
LOC122356417 mfsd2aa,LOC107654966,LOC107705421,LOC107602949,LOC107739898 other upstream 853491 13749135 ~ 13760734 (+)
tasp1 tasp1,LOC107705405,LOC107654993,LOC107600565,LOC107662811,LOC107585512,LOC107739887 other upstream 1455785 13134473 ~ 13158440 (+)
LOC122357077 zgc:153049,LOC107747287,LOC107736842,LOC107665562,LOC107664273,LOC107573610,LOC107553186 other downstream 491415 15106458 ~ 15226722 (+)
fam135a LOC107747270,LOC107665594,LOC107736843,LOC107664195,LOC107564672 other downstream 640031 15255074 ~ 15275234 (+)
tarbp1 tarbp1,si:dkey-85a20.4,LOC107736847,LOC107564676,LOC107683215 other downstream 680806 15295849 ~ 15314656 (+)
LOC122356934 LOC107747267,LOC107665602,LOC107601027 other downstream 699771 15314814 ~ 15318177 (+)
hps1 hps1,LOC107747297,LOC107665607,LOC107719211,LOC107702747,LOC107586068 other downstream 1249796 15864839 ~ 15871816 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000012_04436374_04437448 NA coding CI01000012 null 4435280 ~ 4437599 (+)