G93833


Basic Information

Item Value
gene id G93833
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14613092 ~ 14618650 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU138844
AGTCAAATTCAAAACTTTGTattgaagctttattttttccatGATTAATCACTTGTGCAGGTAACTGCATTACAAAGTGTCTCTAAATGTAATTGGTCACATGATTACCACATTTACCGTAGAAATGGTTTTCACAGTCTTTGCAAAACACTGaatgataataattacaatGAACGGGACATAAACACAATGCGAAAGTGCTTTTAgaacatacatttaaacatacaaatgATCCTCTATGATTAAACCACATTTTAGTGTGATTTTTGAACTTTAGGATGACCCCATACTTTTGGTTAcaaaagtggcaaaaaaaactaacaaacatattttgagCGTTACATTCTTGTTTTCAAAAtctaatgaaatgtttaaaatcaaacTACAGAGACAATTACGGGCGGTGATCAGTACTCCAGTACATTTCCTATTTGCTTATCCTCTTCAGCAAATCAACCGCTCCACCTACTAGAGCTCCTGTAGCACCACCCACTGATGCCAGACCAGCTGTTGCTGTTGCAGACAAACCAGCAGCACTACCTGCAGACTGGAGGATAGCGACCAAACTTCCTGCAGCCACACCGCCCCCATTGGCAATGGCTGCTGAAGACATCATGCCAGCTGCCGTAGAACCTGCTGCGATACCGGCGCCAGTAAAACCAGCCACCCCGAGCGCAACTGGGGCCAGAAGTACGGCACCAGCTAATCggcaaaaaaagtaataaatggtTCAAAGCATTTCTGTGATTATATCATTAATTACTCCcacgtgttgttccaaacctgtaagaccttcattcattttcataacacaaattaagatattttgatgaaatcggaaAGCAATCTGACCCTCCGCAGACAacaacagaactgaaaaaatcctaaatccagaaacgtagtaaatgcATCGGTAAActgtccatgtgacatcagtggctcaacttttactcaaccattcttctcctcTGAGTTACGCCTTTTACGTCCATTTATGTATGTACTAATAACAAACGtcttataggtttggaatgacatgaaggcgagtaattaatgaacaATTTTTCATTTGGGGGTGAACTAACACACAGTAACTATAGTTCACACAGATGTAGACCTAACAAGTTTCTCATAAATACTCGTGCTCTGGCTTTGTCAGAAGCGATTAGGAGAAGTTTAGCATTACATCAGGACTGTTTTCACTGAGTGTCAGATCAggtgtccaaacagctgataaaacctTTACAATAATCCAAATGTAATCCACACCCTTCCAGTCAGTCAATCTATTACACCTTGTGATGCTAGTAAGACCCATGAAAGTGTGTAGAACCATTCTGAATTGTAAACTGTGTTTGAGCTGAGCTTTTTTTCACTGGAAGAAGCAAAATTATGAATAGAGGTCCTGTATTTTAGTGAGAAGTTGTTAAAAACACCTTAATGGATTAACGTGACGCttttatcagatgtttaaaGTCTGACGATCTTTAAGAAAAAGAAGATTATGAAGAAAAGATGCAAGTctaatgctacatttctacaaatctgtTCCGATATAGTCATCTACATTTTGGGAGTCCACAAGACTAGTAAATTTTCAGCACACTTTCATTTAGAGGGAACTATTACTTTATActtctgaaaaacaacaacaacaacatttggTCTTACTACTTACCAGCCCCAGCTGTAAGCCCAATGACGGTGAATAGAGCTTgaggtttaaaaaatat
>TU138846
tttttttttttttttttttTTTGTattgaagctttattttttccatGATTAATCACTTGTGCAGGTAACTGCATTACAAAGTGTCTCTAAATGTAATTGGTCACATGATTACCACATTTACCGTAGAAATGGTTTTCACAGTCTTTGCAAAACACTGaatgataataattacaatGAACGGGACATAAACACAATGCGAAAGTGCTTTTAgaacatacatttaaacatacaaatgATCCTCTATGATTAAACCACATTTTAGTGTGATTTTTGAACTTTAGGATGACCCCATACTTTTGGTTAcaaaagtggcaaaaaaaactaacaaacatattttgagCGTTACATTCTTGTTTTCAAAAtctaatgaaatgtttaaaatcaaacTACAGAGACAATTACGGGCGGTGATCAGTACTCCAGTACATTTCCTATTTGCTTATCCTCTTCAGCAAATCAACCGCTCCACCTACTAGAGCTCCTGTAGCACCACCCACTGATGCCAGACCAGCTGTTGCTGTTGCAGACAAACCAGCAGCACCTAAAAACAGAACACAACCTTATAACAGCAATAACTGAACCATCCCATGTACATTAAATCAGGTACCAattcttcttaaaaatgaattgaacGTGTTTGTTTTGCTCGTATTTCTACTAAATACCTGCAGACTGGAGGATAGCGACCAAACTTCCTGCAGCCACACCGCCCCCATTGGCAATGGCTGCTGAAGACATCATGCCAGCTGCCGTAGAACCTGCTGCGATACCGGCGCCAGTAAAACCAGCCACCCCGAGCGCAACTGGGGCCAGAAGTACGGCACCAGCTAATCggcaaaaaaagtaataaatggtTCAAAGCATTTCTGTGATTATATCATTAATTACTCCcacgtgttgttccaaacctgtaagaccttcattcattttcataacacaaattaagatattttgatgaaatcggaaAGCAATCTGACCCTCCGCAGACAacaacagaactgaaaaaatcctaaatccagaaacgtagtaaatgcATCGGTAAActgtccatgtgacatcagtggctcaacttttactcaaccattcttctcctcTGAGTTACGCCTTTTACGTCCATTTATGTATGTACTAATAACAAACGtcttataggtttggaatgacatgaaggcgagtaattaatgaacaATTTTTCATTTGGGGGTGAACTAACACACAGTAACTATAGTTCACACAGATGTAGACCTAACAAGTTTCTCATAAATACTCGTGCTCTGGCTTTGTCAGAAGCGATTAGGAGAAGTTTAGCATTACATCAGGACTGTTTTCACTGAGTGTCAGATCAggtgtccaaacagctgataaaacctTTACAATAATCCAAATGTAATCCACACCCTTCCAGTCAGTCAATCTATTACACCTTGTGATGCTAGTAAGACCCATGAAAGTGTGTAGAACCATTCTGAATTGTAAACTGTGTTTGAGCTGAGCTTTTTTTCACTGGAAGAAGCAAAATTATGAATAGAGGTCCTGTATTTTAGTGAGAAGTTGTTAAAAACACCTTAATGGATTAACGTGACGCttttatcagatgtttaaaGTCTGACGATCTTTAAGAAAAAGAAGATTATGAAGAAAAGATGCAAGTctaatgctacatttctacaaatctgtTCCGATATAGTCATCTACATTTTGGGAGTCCACAAGACTAGTAAATTTTCAGCACACTTTCATTTAGAGGGAACTATTACTTTATActtctgaaaaacaacaacaacaacatttggTCTTACTACTTACCAGCCCCAGCTGTAAGCCCAATGACGGTGAATAGAGCTTgaggtttaaaaaatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU138844 False 1733 lncRNA 0.38 2 14616797 14618650
TU138846 True 1858 lncRNA 0.37 2 14613092 14618650

Neighbor

gene id symbol gene type direction distance location
gphb5 gphb5,LOC104954562 coding upstream 125592 14485066 ~ 14487500 (+)
esr2b LOC107736782,LOC107683586 coding upstream 219905 14377594 ~ 14393187 (+)
tmx1 tmx1,LOC107654918,LOC107602932,LOC107736746,LOC107683560,LOC107705366 coding upstream 268231 14339891 ~ 14344861 (+)
atl1 atl1,LOC107705445,LOC107602974,LOC107736665,LOC107682422,LOC107553217 coding upstream 336653 14268377 ~ 14276439 (+)
dmac2l atp5s,LOC107705443,LOC107602971,LOC107654946,LOC107736634,LOC107553216 coding upstream 377059 14232374 ~ 14236033 (+)
phf3 LOC107665590,LOC107726593,LOC107602981,LOC107736851,LOC107683665,LOC107553234 coding downstream 1515 14620165 ~ 14630849 (+)
zgc:171579 zgc:171579,LOC107665586,LOC107568696,LOC107736860,LOC107747305,LOC107579559,LOC107664312 coding downstream 221132 14839782 ~ 14842432 (+)
adgrb3 adgrb3,LOC107664175,LOC107665593,LOC107736840,LOC107747274 coding downstream 255265 14873915 ~ 15011010 (+)
zgc:172136 LOC107665601,LOC107601056,LOC107747271,LOC107664217,LOC107736845 coding downstream 659710 15278360 ~ 15295194 (+)
golga7bb golga7bb,LOC107728443,LOC107702732,LOC107665585,LOC103368019,LOC108247940 coding downstream 963218 15581868 ~ 15607881 (+)
G93819 NA non-coding upstream 1092 14607396 ~ 14612000 (+)
G93840 syt16,LOC107683639,LOC107553223 non-coding upstream 28615 14582319 ~ 14584477 (+)
G93839 sgpp1,LOC107726595,LOC107602978,LOC107683631 non-coding upstream 36762 14575380 ~ 14576330 (+)
G93836 NA non-coding upstream 43395 14569155 ~ 14569697 (+)
G93835 NA non-coding upstream 44179 14568325 ~ 14568913 (+)
G93966 NA non-coding downstream 59749 14678399 ~ 14678599 (+)
G93978 NA non-coding downstream 393900 15012550 ~ 15012780 (+)
G94091 slc35f3b,slc35f3,LOC107601026,LOC107747268,LOC107665565 non-coding downstream 705397 15324047 ~ 15329518 (+)
G94101 NA non-coding downstream 811648 15430298 ~ 15434168 (+)
G94104 NA non-coding downstream 815812 15434462 ~ 15453608 (+)
frmd6 frmd6,LOC107654939,LOC107683538,LOC107736757,LOC107726597 other upstream 243535 14354115 ~ 14369557 (+)
gmfb gmfb,LOC107705437,LOC107553212,LOC107602964,LOC102779377 other upstream 424099 14185315 ~ 14188993 (+)
G93613 NA other upstream 703489 13739607 ~ 13909603 (+)
LOC122356417 mfsd2aa,LOC107654966,LOC107705421,LOC107602949,LOC107739898 other upstream 852358 13749135 ~ 13760734 (+)
tasp1 tasp1,LOC107705405,LOC107654993,LOC107600565,LOC107662811,LOC107585512,LOC107739887 other upstream 1454652 13134473 ~ 13158440 (+)
LOC122357077 zgc:153049,LOC107747287,LOC107736842,LOC107665562,LOC107664273,LOC107573610,LOC107553186 other downstream 487808 15106458 ~ 15226722 (+)
fam135a LOC107747270,LOC107665594,LOC107736843,LOC107664195,LOC107564672 other downstream 636424 15255074 ~ 15275234 (+)
tarbp1 tarbp1,si:dkey-85a20.4,LOC107736847,LOC107564676,LOC107683215 other downstream 677199 15295849 ~ 15314656 (+)
LOC122356934 LOC107747267,LOC107665602,LOC107601027 other downstream 696164 15314814 ~ 15318177 (+)
hps1 hps1,LOC107747297,LOC107665607,LOC107719211,LOC107702747,LOC107586068 other downstream 1246189 15864839 ~ 15871816 (+)

Expression


Co-expression Network