G93978


Basic Information

Item Value
gene id G93978
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 15012550 ~ 15012780 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU139091
GGAAGAGGCGGGTAGTACTGACATTGACTGGAGATGTCAccgtattaaaaataataaagccaACGAGACAAGCCCGTTATGACAGCGACCGAACAAGACGACGCTCATGCAAAGGATCCCAGCTCCCGCTCTCCCTTCTCCACGGCTcgaaatgaaaatacatttgtcCTCCTTTGTTCTTCAATGTGCAAATCAAAATGTCAAATCCATCACATTACAGGCCGGCGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139091 True 231 lncRNA 0.47 1 15012550 15012780

Neighbor

gene id symbol gene type direction distance location
adgrb3 adgrb3,LOC107664175,LOC107665593,LOC107736840,LOC107747274 coding upstream 1540 14873915 ~ 15011010 (+)
zgc:171579 zgc:171579,LOC107665586,LOC107568696,LOC107736860,LOC107747305,LOC107579559,LOC107664312 coding upstream 170118 14839782 ~ 14842432 (+)
phf3 LOC107665590,LOC107726593,LOC107602981,LOC107736851,LOC107683665,LOC107553234 coding upstream 381701 14620165 ~ 14630849 (+)
gphb5 gphb5,LOC104954562 coding upstream 525050 14485066 ~ 14487500 (+)
esr2b LOC107736782,LOC107683586 coding upstream 619363 14377594 ~ 14393187 (+)
zgc:172136 LOC107665601,LOC107601056,LOC107747271,LOC107664217,LOC107736845 coding downstream 265580 15278360 ~ 15295194 (+)
golga7bb golga7bb,LOC107728443,LOC107702732,LOC107665585,LOC103368019,LOC108247940 coding downstream 569088 15581868 ~ 15607881 (+)
slc25a28 slc25a28,LOC107601050,LOC107747263,LOC107719215,LOC107665596 coding downstream 701413 15714193 ~ 15723743 (+)
got1 got1,LOC107665595,LOC107601049,LOC107586067,LOC107702745 coding downstream 752174 15764954 ~ 15773545 (+)
hpse2 hpse2,LOC107747298,LOC107665577,LOC107702736,LOC107719234,LOC107586094 coding downstream 784653 15797433 ~ 15861462 (+)
G93966 NA non-coding upstream 333951 14678399 ~ 14678599 (+)
G93833 NA non-coding upstream 393900 14613092 ~ 14618650 (+)
G93820 NA non-coding upstream 397507 14614225 ~ 14615043 (+)
G93819 NA non-coding upstream 400550 14607396 ~ 14612000 (+)
G93840 syt16,LOC107683639,LOC107553223 non-coding upstream 428073 14582319 ~ 14584477 (+)
G94091 slc35f3b,slc35f3,LOC107601026,LOC107747268,LOC107665565 non-coding downstream 311267 15324047 ~ 15329518 (+)
G94101 NA non-coding downstream 417518 15430298 ~ 15434168 (+)
G94104 NA non-coding downstream 421682 15434462 ~ 15453608 (+)
G94110 NA non-coding downstream 448593 15461373 ~ 15461752 (+)
LOC122356093 NA non-coding downstream 494213 15506993 ~ 15532235 (+)
frmd6 frmd6,LOC107654939,LOC107683538,LOC107736757,LOC107726597 other upstream 642993 14354115 ~ 14369557 (+)
gmfb gmfb,LOC107705437,LOC107553212,LOC107602964,LOC102779377 other upstream 823557 14185315 ~ 14188993 (+)
G93613 NA other upstream 1102947 13739607 ~ 13909603 (+)
LOC122356417 mfsd2aa,LOC107654966,LOC107705421,LOC107602949,LOC107739898 other upstream 1251816 13749135 ~ 13760734 (+)
tasp1 tasp1,LOC107705405,LOC107654993,LOC107600565,LOC107662811,LOC107585512,LOC107739887 other upstream 1854110 13134473 ~ 13158440 (+)
LOC122357077 zgc:153049,LOC107747287,LOC107736842,LOC107665562,LOC107664273,LOC107573610,LOC107553186 other downstream 93678 15106458 ~ 15226722 (+)
fam135a LOC107747270,LOC107665594,LOC107736843,LOC107664195,LOC107564672 other downstream 242294 15255074 ~ 15275234 (+)
tarbp1 tarbp1,si:dkey-85a20.4,LOC107736847,LOC107564676,LOC107683215 other downstream 283069 15295849 ~ 15314656 (+)
LOC122356934 LOC107747267,LOC107665602,LOC107601027 other downstream 302034 15314814 ~ 15318177 (+)
hps1 hps1,LOC107747297,LOC107665607,LOC107719211,LOC107702747,LOC107586068 other downstream 852059 15864839 ~ 15871816 (+)

Expression


Co-expression Network