G94361


Basic Information

Item Value
gene id G94361
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 16541185 ~ 16542938 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU139619
GCAGAGACAAACACACGCAGGAGgagcacacacagaaacactcaTGTTGTACATTTTGGGGATTGCTTTGGGGCTCGTTGTCATCATCCAGTGCATGTCACACGGTCTGAGTCAGATACATGCCAAAGTTGGAAATGcctttcaagaaaaaaatatactttacataAACAAgTGGAGAATGAATGATCAGGAACTTCACCTCATCATTAAACTCCTCTCCGTTGGGTTGGTGGATGCAGATCCAAACACTCTGCACCATATAAAAGAATACAGAGATCTGCGAGGAAGTTCAACCTGAGAGGGGAAGATCGTATGAGTTTTGCTTCCTAATCATTAACAGCGATAAAAGAAACCAGACAGGTTCTCTTTGACTTGGGTTACTGGTTATTCACATGTGACATGACAAAGACTGCTGTCTTCCCATGAAGAACTTTGTCGTGAAATGATATCCAAAATATAGATCATCTGTTCTGATCTGATCTCTGATCTGTTCAGAGGAGAAATTATATGATGCACCGATTCCCATGGACAACAACAAACATTCTCTGGAGTAGAGAATGTTTCTAACGTTTGTATCAGCATGCATTAAACATCAAAGTTTCCAAAGACAGATCAGTAATTAACTGAAGCATGCAGTGTACGATATAAAGCTGTAATGTATAAACAGTTCAACAAAGTCA

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules
ko04530 Tight junction

RNA

RNA id representative length rna type GC content exon number start site end site
TU139619 True 680 lncRNA 0.40 4 16541185 16542938

Neighbor

gene id symbol gene type direction distance location
cpeb3 cpeb3,LOC107586080,LOC107719219 coding upstream 25481 16488877 ~ 16515704 (+)
ide ide,LOC107665588,LOC107549153 coding upstream 71692 16448734 ~ 16469493 (+)
opn3 opn3,LOC107549142,LOC107665579,LOC107747290,LOC107586115,LOC107719228 coding upstream 109176 16422784 ~ 16432009 (+)
cdc42ep3 cdc42ep3,LOC107549143,LOC107665567,LOC107676396,LOC107747292,LOC107719229,LOC107586113 coding upstream 151070 16381358 ~ 16390115 (+)
LOC122356348 LOC107747251,LOC107549156,LOC107665613,LOC107676394,LOC107719205,LOC107586077 coding upstream 208520 16327857 ~ 16332665 (+)
mlh1 mlh1 coding downstream 21370 16564308 ~ 16570793 (+)
mrpl14 mrpl14,LOC107676385,LOC107679189,LOC107549148,LOC107734281,LOC107586084 coding downstream 50362 16593300 ~ 16594640 (+)
cdh23 cdh23,LOC107679169,LOC107676383,LOC107734258,LOC106579432 coding downstream 77344 16620282 ~ 16826870 (+)
smoc2 smoc2,LOC107724603,LOC107679127,LOC107734272,LOC107676362 coding downstream 291352 16834290 ~ 16867531 (+)
dact2 LOC107679215,LOC107724587,LOC107568117,LOC107676395,LOC107568524,LOC107734259 coding downstream 351946 16894884 ~ 16900363 (+)
LOC122356350 NA non-coding upstream 160109 16361672 ~ 16381076 (+)
LOC122356273 NA non-coding upstream 626239 15898871 ~ 15914946 (+)
G94176 NA non-coding upstream 752955 15774767 ~ 15788230 (+)
G94175 NA non-coding upstream 766790 15773969 ~ 15774395 (+)
G94174 NA non-coding upstream 776611 15764340 ~ 15764574 (+)
G94365 NA non-coding downstream 14898 16557836 ~ 16558137 (+)
G94397 NA non-coding downstream 198529 16741467 ~ 16796842 (+)
G94481 NA non-coding downstream 343146 16886084 ~ 16925137 (+)
G94484 NA non-coding downstream 383976 16926914 ~ 16938654 (+)
G94501 NA non-coding downstream 478926 17021864 ~ 17030075 (+)
G94324 NA other upstream 22359 16515827 ~ 16518826 (+)
nkx1.2la nkx1-2,nkx1.2la,LOC107601042,LOC107702751,LOC107665606,LOC107586110,LOC107719237 other upstream 636276 15901540 ~ 15904909 (+)
G94186 st3gal7,LOC107665608,LOC107601047,LOC107747259 other upstream 663763 15873444 ~ 15877422 (+)
hps1 hps1,LOC107747297,LOC107665607,LOC107719211,LOC107702747,LOC107586068 other upstream 669369 15864839 ~ 15871816 (+)
LOC122356934 LOC107747267,LOC107665602,LOC107601027 other upstream 1223008 15314814 ~ 15318177 (+)
G94378 capn1a,LOC107549131,LOC107676389,LOC107586085,LOC107679188,LOC107734280 other downstream 54843 16597781 ~ 16605383 (+)
G94564 LOC107664233,LOC107736862,LOC107665565,LOC107747268,LOC107601026 other downstream 1017358 17560296 ~ 17575938 (+)
G94760 NA other downstream 1896235 18439173 ~ 18439583 (+)
G94789 LOC107563058 other downstream 1993954 18536892 ~ 18537443 (+)
G94776 NA other downstream 2002414 18545352 ~ 18631718 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G681852 NA non-coding CI01180000 null 7629096 ~ 7629573 (+)