G94397


Basic Information

Item Value
gene id G94397
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 16741467 ~ 16796842 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU139677
tttttttttttttttttttttttttTCTCTCAAcagaactttttttatttatttgtatttttatgaaacaaaatataaGCAATTGATTTTGTCACAGCGTTGCCACTAGAGCTACATATACGGTATTGACTTTGTACAGGCACACGAGcaacttttaaatgtacaaacagGTTCATAATTATCAACATAATTCCAATATTTCCAGTCATTCACCTATAAACTATCCATTCATACACAAAGCAAAGTTTTGGCAGTGGATTGAAGTGGCTCTTTATGGCAGTGGATTAAaagctttttgcttttttgtattttgaataatagaaacacacacaattaaaaagtcaatacaaaatatatagaaaatctTGTTTTATGAGCCCTCTGGCCCCTTAAAGCCGCAAGTGACATGGGACACGTAAGACATTTACCACAAAAAATTCTGCATTCATTCTGGCAGAACTCATTTTTAAGCTACATACATCATAAAAGCACCACACTAACCACACAAGGGTTTTTAATAGCCCATTGTTTCTCAGCAGGTCTGACGGTGAGTGTACTGAGAACATCCCTTTTCCACTCAAACGTACCGGTGCTGGCCTCAATCTGGGCCTGTTACATAAAGACACTGTATTATCaactatttagcattttaaagcaaaattgcAGATATTCCAGCCGAGAACCTCATTTGGGACCAGCACTGGCACCATTTCAGTGATAAAGTGACAACTGAGTACTTTGGCACAAACATCCTTATTGAGTGTGAAGGAAAATCAGTATAGAGATGGGTAAAAGAGGAGTGAAAAATGAGGTATTAATACATCCCTAGAAGTAAGCGGATGAAGTGACCGTTTCATTGGGAACGGAGGTGAGGATGGGGATAGAAAAATGAAAGAGAGTAAAACGGTCTTTTAAGTGCAAATGAAACCACAGTATGACTGACACGAAGCACGTGGTGAACAGGAATGTGTGCAAACTGCTTAGCTGAAAAATGTTCAACTCAAAGGCCACGAAAGAAAATCTTTGGCTCCTCTTCATGAAATCGTGTTCTCCCTGATACCCTAACTTGTGAAACGTTCCGATTTTCCTTCTCGGGAAACCCATTTAAGTcagcagacagacacagacGCCAACCAGATAAGGGGTCCCACCGTGATAGCGGAGAGTTCAGTTCTCGTTTTTTGGGGTGGGTCCGTCCTCATCATCTTTGCAGAGGACAGGAAGAGACATGATGATGTGGAGGAGATGGAAGAAGCACTCGATGCTCCTGGGGAGAGCGTGACACGTTTTAGTCCATTAAGTTGGGAGATTCAGG

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04672 Intestinal immune network for IgA production
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
TU139677 True 1315 lncRNA 0.40 2 16741467 16796842

Neighbor

gene id symbol gene type direction distance location
mrpl14 mrpl14,LOC107676385,LOC107679189,LOC107549148,LOC107734281,LOC107586084 coding upstream 146827 16593300 ~ 16594640 (+)
mlh1 mlh1 coding upstream 170674 16564308 ~ 16570793 (+)
cpeb3 cpeb3,LOC107586080,LOC107719219 coding upstream 225763 16488877 ~ 16515704 (+)
ide ide,LOC107665588,LOC107549153 coding upstream 271974 16448734 ~ 16469493 (+)
opn3 opn3,LOC107549142,LOC107665579,LOC107747290,LOC107586115,LOC107719228 coding upstream 309458 16422784 ~ 16432009 (+)
smoc2 smoc2,LOC107724603,LOC107679127,LOC107734272,LOC107676362 coding downstream 37448 16834290 ~ 16867531 (+)
dact2 LOC107679215,LOC107724587,LOC107568117,LOC107676395,LOC107568524,LOC107734259 coding downstream 98042 16894884 ~ 16900363 (+)
zfyve21 zfyve21,LOC107724627,LOC107734304 coding downstream 179288 16976130 ~ 16985202 (+)
LOC122356173 marveld1,LOC107564681,LOC107664302,LOC107736855,LOC107665576 coding downstream 624779 17421621 ~ 17422822 (+)
zbtb8os zbtb8os coding downstream 946117 17742959 ~ 17752932 (+)
G94365 NA non-coding upstream 183330 16557836 ~ 16558137 (+)
G94361 NA non-coding upstream 198529 16541185 ~ 16542938 (+)
LOC122356350 NA non-coding upstream 360391 16361672 ~ 16381076 (+)
LOC122356273 NA non-coding upstream 826521 15898871 ~ 15914946 (+)
G94176 NA non-coding upstream 953237 15774767 ~ 15788230 (+)
G94481 NA non-coding downstream 89242 16886084 ~ 16925137 (+)
G94484 NA non-coding downstream 130072 16926914 ~ 16938654 (+)
G94501 NA non-coding downstream 225022 17021864 ~ 17030075 (+)
G94543 NA non-coding downstream 416105 17212947 ~ 17244969 (+)
G94637 NA non-coding downstream 1092812 17889654 ~ 17889901 (+)
G94378 capn1a,LOC107549131,LOC107676389,LOC107586085,LOC107679188,LOC107734280 other upstream 136084 16597781 ~ 16605383 (+)
G94324 NA other upstream 222641 16515827 ~ 16518826 (+)
nkx1.2la nkx1-2,nkx1.2la,LOC107601042,LOC107702751,LOC107665606,LOC107586110,LOC107719237 other upstream 836558 15901540 ~ 15904909 (+)
G94186 st3gal7,LOC107665608,LOC107601047,LOC107747259 other upstream 864045 15873444 ~ 15877422 (+)
hps1 hps1,LOC107747297,LOC107665607,LOC107719211,LOC107702747,LOC107586068 other upstream 869651 15864839 ~ 15871816 (+)
G94564 LOC107664233,LOC107736862,LOC107665565,LOC107747268,LOC107601026 other downstream 763454 17560296 ~ 17575938 (+)
G94760 NA other downstream 1642331 18439173 ~ 18439583 (+)
G94789 LOC107563058 other downstream 1740050 18536892 ~ 18537443 (+)
G94776 NA other downstream 1748510 18545352 ~ 18631718 (+)
lhcgr lhcgr,LOC107688869,LOC107679161,LOC107733338 other downstream 2359440 19156282 ~ 19170027 (+)

Expression


Co-expression Network