LOC122357020 (LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639)


Basic Information

Item Value
gene id LOC122357020
gene name LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 18957703 ~ 18975524 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU140438
ATAACTTGCTCTCTCTCTGCGGAACAGACGCCGGAGAGCGAGCCTCGGCGAGGAAGTGCACTTAAGAAAACACCGAGACAAAAGAGACCATTCAAAACAATCCTGTGGACGATTTTCAAACAGGATCTTATGTGACAGCTGCTCCAAAGGAAACGAACGCATCGAGAGATTTAGAGCCATCGATCGCCTGCTATTGGAATTGTACTCAATTATTTTTTACGACGCTTTTTAATCTCTGGATACTTCGAAATTTGccctttgttttgttgtctATCGCTAAGATGCGTTAACGCGTTTTCGCCCAGGCGGATATGTCTGATACGTCCAGAGGTATGGTTTGCCGAACCTAGCCAGCAGCGCGTGCAGATGGCAGCACCTGTCGGAGCCATGGGGCCGGAGATGGCGGTCGCCCGGGAGCTGCGGCGCATCGGAGACGAGTTCAACCGCCTGTACTGTCTGGGGGCCGGTGCAGGCGGGAACAACGCGGCCCAGCTGCGCGCCCCCAACGAACACGCCGTCATCGTGTGGATGAACGACCTTATCGGACGTGTAGTACAGTTTTTCCTGCGAAGGAGATGATCGACACATTGAACGCCCAGCAGACGCGTAGCAGACATGTAGCATCATACATCTGactgtaaatatgtacataataagGGATAACAGCAGCGCTGCTCTTCCGCAAACCTCTCCGGGTTTCGGCGTACAGTTTTGGACCTGTCGGGATGTGTGCAGACCTGGACGGATACATAAATCGGGACCCTCGGCCATCCATAGACTGACTCACAGCAGAGTTTCCTGCGTTCACATGGAAAGCTGAGCCATTAGATGCTGTGTTGACGTGGAGGTTTTTTTAACCCCACGTGGAGTGTGGAAAACGTGCCTTCATTGCCTGTTTGCCCTTGACACGTCTCTCTTTTTGGTCTTTACcctgtctttttctttattgcttttatatttattttcactgtatttaatttgtacattttgtgtaTAATTTGAACGTGGACGTTAGTCGGTCAAGCGGCGATATTAGTGGTTCTGCCTGTCCCTCGCGTGTTCAATGGCTCCAGGTTTGCACTTGCCTTTGGTTTGCGTAGTCTATACAAATCAAATAGAATAGAAGATGACAAACcccaaaacagaaaatgaagtCGGAGTTTTTATACAATTGCAATTGAGGATATGACCGAAGCTCACAATATATAGAAATTTTACctatattatttgcatatatcAAATGCATTCTCACTTTGAAGCCACATAATTAAAGTCCTTTTCACATGACTCCCAATGCATTGAGAAATTTAAAGCACTGAGCTACTGCATTGCAAGCTTTGTTACAAATGGAAGGGACACATGAATATTTTCATTAGGTTATAGTCAGTAGTCTGATAAACTGAAAGGAAGACATTGGCTAGTTACAGTAACTTGACGTTACAGTACGGCTGACACTTTCCATTTTAGTGTGTATTTGgaagaaattacaaaaataaaaatgacttctcAAAAGATCCCATGCTTAGGGTAAATTTCGTGGCAGAAATTTCAATAGGAATCAATAGGAGAGTTTTGCATCAGAGCCAAAAAAACGTTTCTTGCACAGATTTCACTCGTGTTCAAGTTGGTCATGTGGTGATCACCGTTTTGACCGACCgaaagctgcttggtttgaaagcACTCCTGTTTGAGCGGCAGTGACTACTAGACCTTTCTTGGCCTGTAGACTTATAACCGTTGATTTTgcctaaaacataaaatcaattattaacTTGAACCCTCTTTTTAAAGCACGTTATATAGAACTCAAAATGAACCTACATTTGACAAACTGTGTTTCTTACCCAGAAAATAGCTTTTGCCGTTTTGCTATCTTCAAAGCTTTTCCCGCTAAGATCAAAGTGCCTGCTTTATGCTTGTGTTTAAAGATGAGAGTCATGTGTGAAGGTCTTCTGAGCACCTTCAGGTACTCCTAAATCTCACAGTTCGAGCATTGTTTTATGCGTTTGAATTCCTGCCGCTGATTAAATCAAATCTGACAGGCAAAGATAGTAAGTGTAACTAACATAgacatatttgttgttttgacaTCATAAACATTCCACATTTGGTATTTCGGTTTTTGTTAGATTCCTTGTTtggactgtttgtttgttttttagtaagcaaaagtgacatttaattGATGATTTCATTAATGTTCAAACAGCATGTTTTAATGACTATTTTTGTGAATGTAGTTTAGGTCAAGGGGATTTATATGGAATAGCTTTCTTCTGAAGCGATCGTACACACAGAAGAAACTGCGTTTAAGTGCCTTGCTCAGGGGCACAATGGTGATAGATCAGGATTTTATTCACAGGAACGTGGTTTATGGTTACACCAAATTTGAGATTGAAATTTGCAACCGTTCTAGTTAATTGCCCATGTCCTCTAGTAGCGTACGCATTACAACCACAGCCTTACCCCGAGTCTAACAAACTGGCCTGACTAAATGAACTTTAACAGCCTCAGGGACTAAGGGAAATACACCTGTGTAGATTTCTTGAACAAAACCAGTCTTCCGTCTTTACTTCAGCTTATAGATTCTCCCGGCTTTGCCTTTTATTACCGTTTGTCCCAGTATTCCAGTAATCAATGCACAAGGCTCAGGATGAGTCGTCAAGTATGTTGGTATAACaatgatgtgtttttataaGTTGCAAAGATTTAAATATGAACTGATGTATTGACTACCTACCGTGAAAGGTATTGCTGAAAGTTAAGGAAGTCGGTTAGACAATTCCACTTGTGGAAGATGCATGGCCCTGTGTTAtcatatgcatttgtttgtatatcGGTTTTGTTGCTCTTTGCCAAAATGACAATGTTTAGCTTGTCTACCGTTCCAGGTTTACCACTCGAACCAAAGACCTCGTTTTTCAATGCATACTACATCGTGTCATGTTGCATGtgttcattttttgcattttctgaaaGATTTATGCAGCATTCCCGTTCTTTAGCCCTTTGATTCCAGAACAAAAcgttttgttgggttttttttcatgaatttcaGGCCAACCTGTGTATTTCTCACTGGACCTCTGACTGAGTCTTTTCAGTCCTGTTGCACTGAACACCCGCATTACCCGATCTGACGCCACCCAGGACCCAGTACATTTGTAGCACAATgattatttgtttctgtttgtttgttttgtttgttaaatgcatcttttttgtattttgcactGAACCATTTCTGTGCTAATTTGTGCAATACTGCTGTAAATAAAAGCCGCTT
>XM_043256197.1
TTCGCTTCAGTGAATAGACGGCAGAATAACTTGCTCTCTCTCTGCGGAACAGACGCCGGAGAGCGAGCCTCGGCGAGGAAGTGCACTTAAGAAAACACCGAGACAAAAGAGACCATTCAAAACAATCCTGTGGACGATTTTCAAACAGGATCTTATGTGACAGCTGCTCCAAAGGAAACGAACGCATCGAGAGATTTAGAGCCATCGATCGCCTGCTATTGGAATTGTACTCAATTATTTTTTACGACGCTTTTTAATCTCTGGATACTTCGAAATTTGccctttgttttgttgtctATCGCTAAGATGCGTTAACGCGTTTTCGCCCAGGCGGATATGTCTGATACGTCCAGAGAGCAAACGCTGGCCAATGGCCCGGCCTCGCGGGGGAGCGGAGAGAGCGCCGGTGGCGGAGCCGTCTTGCGCACCGAGCACTTTGACTTCCCTCAGCCGAGCGATGGGGACCCGTTAAGGGGAGGGATTGCCATGTCGAATAGTCACCAGTCGAGGTCACCGATGTGCCGAACCTTCTCCAGGTCCTCTAGTGGCTATTTTTCCGTCGACAGCGATTCTGTGCCAAGTTCCCCGCTAATGCCCAATATTTCCGAAGCGCAAGACGGCCAAAGTGATGAGGTATGGTTTGCCGAACCTAGCCAGCAGCGCGTGCAGATGGCAGCACCTGTCGGAGCCATGGGGCCGGAGATGGCGGTCGCCCGGGAGCTGCGGCGCATCGGAGACGAGTTCAACCGCCTGTACTGTCTGGGGGCCGGTGCAGGCGGGAACAACGCGGCCCAGCTGCGCGCCCCCAACGAACACGCCGTCATCGTGTGGATGAACGACCTTATCGGACGTGTAGTACAGTTTTTCCTGCGAAGGAGATGATCGACACATTGAACGCCCAGCAGACGCGTAGCAGACATGTAGCATCATACATCTGactgtaaatatgtacataataagGGATAACAGCAGCGCTGCTCTTCCGCAAACCTCTCCGGGTTTCGGCGTACAGTTTTGGACCTGTCGGGATGTGTGCAGACCTGGACGGATACATAAATCGGGACCCTCGGCCATCCATAGACTGACTCACAGCAGAGTTTCCTGCGTTCACATGGAAAGCTGAGCCATTAGATGCTGTGTTGACGTGGAGGTTTTTTTAACCCCACGTGGAGTGTGGAAAACGTGCCTTCATTGCCTGTTTGCCCTTGACACGTCTCTCTTTTTGGTCTTTACcctgtctttttctttattgcttttatatttattttcactgtatttaatttgtacattttgtgtaTAATTTGAACGTGGACGTTAGTCGGTCAAGCGGCGATATTAGTGGTTCTGCCTGTCCCTCGCGTGTTCAATGGCTCCAGGTTTGCACTTGCCTTTGGTTTGCGTAGTCTATACAAATCAAATAGAATAGAAGATGACAAACcccaaaacagaaaatgaagtCGGAGTTTTTATACAATTGCAATTGAGGATATGACCGAAGCTCACAATATATAGAAATTTTACctatattatttgcatatatcAAATGCATTCTCACTTTGAAGCCACATAATTAAAGTCCTTTTCACATGACTCCCAATGCATTGAGAAATTTAAAGCACTGAGCTACTGCATTGCAAGCTTTGTTACAAATGGAAGGGACACATGAATATTTTCATTAGGTTATAGTCAGTAGTCTGATAAACTGAAAGGAAGACATTGGCTAGTTACAGTAACTTGACGTTACAGTACGGCTGACACTTTCCATTTTAGTGTGTATTTGgaagaaattacaaaaataaaaatgacttctcAAAAGATCCCATGCTTAGGGTAAATTTCGTGGCAGAAATTTCAATAGGAATCAATAGGAGAGTTTTGCATCAGAGCCAAAAAAACGTTTCTTGCACAGATTTCACTCGTGTTCAAGTTGGTCATGTGGTGATCACCGTTTTGACCGACCgaaagctgcttggtttgaaagcACTCCTGTTTGAGCGGCAGTGACTACTAGACCTTTCTTGGCCTGTAGACTTATAACCGTTGATTTTgcctaaaacataaaatcaattattaacTTGAACCCTCTTTTTAAAGCACGTTATATAGAACTCAAAATGAACCTACATTTGACAAACTGTGTTTCTTACCCAGAAAATAGCTTTTGCCGTTTTGCTATCTTCAAAGCTTTTCCCGCTAAGATCAAAGTGCCTGCTTTATGCTTGTGTTTAAAGATGAGAGTCATGTGTGAAGGTCTTCTGAGCACCTTCAGGTACTCCTAAATCTCACAGTTCGAGCATTGTTTTATGCGTTTGAATTCCTGCCGCTGATTAAATCAAATCTGACAGGCAAAGATAGTAAGTGTAACTAACATAgacatatttgttgttttgacaTCATAAACATTCCACATTTGGTATTTCGGTTTTTGTTAGATTCCTTGTTtggactgtttgtttgttttttagtaagcaaaagtgacatttaattGATGATTTCATTAATGTTCAAACAGCATGTTTTAATGACTATTTTTGTGAATGTAGTTTAGGTCAAGGGGATTTATATGGAATAGCTTTCTTCTGAAGCGATCGTACACACAGAAGAAACTGCGTTTAAGTGCCTTGCTCAGGGGCACAATGGTGATAGATCAGGATTTTATTCACAGGAACGTGGTTTATGGTTACACCAAATTTGAGATTGAAATTTGCAACCGTTCTAGTTAATTGCCCATGTCCTCTAGTAGCGTACGCATTACAACCACAGCCTTACCCCGAGTCTAACAAACTGGCCTGACTAAATGAACTTTAACAGCCTCAGGGACTAAGGGAAATACACCTGTGTAGATTTCTTGAACAAAACCAGTCTTCCGTCTTTACTTCAGCTTATAGATTCTCCCGGCTTTGCCTTTTATTACCGTTTGTCCCAGTATTCCAGTAATCAATGCACAAGGCTCAGGATGAGTCGTCAAGTATGTTGGTATAACaatgatgtgtttttataaGTTGCAAAGATTTAAATATGAACTGATGTATTGACTACCTACCGTGAAAGGTATTGCTGAAAGTTAAGGAAGTCGGTTAGACAATTCCACTTGTGGAAGATGCATGGCCCTGTGTTAtcatatgcatttgtttgtatatcGGTTTTGTTGCTCTTTGCCAAAATGACAATGTTTAGCTTGTCTACCGTTCCAGGTTTACCACTCGAACCAAAGACCTCGTTTTTCAATGCATACTACATCGTGTCATGTTGCATGtgttcattttttgcattttctgaaaGATTTATGCAGCATTCCCGTTCTTTAGCCCTTTGATTCCAGAACAAAAcgttttgttgggttttttttcatgaatttcaGGCCAACCTGTGTATTTCTCACTGGACCTCTGACTGAGTCTTTTCAGTCCTGTTGCACTGAACACCCGCATTACCCGATCTGACGCCACCCAGGACCCAGTACATTTGTAGCACAATgattatttgtttctgtttgtttgttttgtttgttaaatgcatcttttttgtattttgcactGAACCATTTCTGTGCTAATTTGTGCAATACTGCTGTAAATAAAAGCCGCTTTTTTCAACTTTCTAA

Function

NR:

description
PREDICTED: bcl-2-like protein 11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU140438 False 3286 lncRNA 0.42 3 18957718 18975499
XM_043256197.1 True 3604 mRNA 0.43 4 18957703 18975524

Neighbor

gene id symbol gene type direction distance location
LOC122356218 vip,LOC107655780,LOC107585469,LOC107597641,LOC107679148 coding downstream 124755 18830268 ~ 18832948 (-)
slc29a1a slc29a1a,LOC107655740,LOC107733356 coding downstream 148123 18780375 ~ 18809580 (-)
LOC122356860 NA coding downstream 177464 18777668 ~ 18780239 (-)
LOC122356886 ate1,LOC107724575,LOC107679187,LOC107655512,LOC107597680 coding downstream 214161 18706349 ~ 18743542 (-)
LOC122356087 ate1,LOC107655512 coding downstream 372587 18574784 ~ 18585116 (-)
LOC122356839 acoxl coding upstream 307 18975831 ~ 19008866 (-)
LOC122357016 fbln7,LOC107679196,LOC107754577,LOC107585467,LOC107733340,LOC107688955,LOC107597673 coding upstream 246532 19222056 ~ 19244847 (-)
zmp:0000001138 LOC107733342,LOC107679128,LOC107754581,LOC107597635,LOC107585445 coding upstream 270080 19245604 ~ 19247578 (-)
LOC122357009 NA coding upstream 282862 19258386 ~ 19266509 (-)
golga4 golga4,LOC107724992,LOC107688375,LOC107733336,LOC107679131 coding upstream 388048 19363572 ~ 19399890 (-)
G94941 NA non-coding downstream 41053 18916245 ~ 18916650 (-)
G94849 NA non-coding downstream 330391 18623483 ~ 18627312 (-)
G94845 NA non-coding downstream 413719 18543652 ~ 18543984 (-)
G94843 NA non-coding downstream 417003 18540385 ~ 18540700 (-)
LOC122356994 NA non-coding downstream 501577 18452872 ~ 18456126 (-)
G94961 NA non-coding upstream 103036 19078560 ~ 19078839 (-)
G94978 NA non-coding upstream 194344 19169868 ~ 19170089 (-)
G94997 mertk,LOC107724611 non-coding upstream 226319 19201843 ~ 19208269 (-)
G95068 NA non-coding upstream 450039 19425563 ~ 19427926 (-)
G95110 NA non-coding upstream 616348 19591872 ~ 19593376 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other downstream 284810 18545571 ~ 18672893 (-)
LOC122356193 slc35f4,slc35f3,LOC107664436,LOC107586844,LOC107559881,LOC107668528,LOC107747268,LOC107665565,LOC107664233,LOC107736862 other downstream 1570697 17374750 ~ 17387006 (-)
G94412 opn3,LOC107549142,LOC107665579,LOC107586115,LOC107747290,LOC107719228,LOC107676370 other downstream 2531168 16425697 ~ 16426535 (-)
cisd1 cisd1,LOC107549159,LOC107747252,LOC107665600,LOC105902329,LOC108443718 other downstream 2665324 16290154 ~ 16292379 (-)
pcdh15a pcdh15a,LOC108443650,LOC107586072 other downstream 2788499 16009687 ~ 16169204 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other upstream 310506 19286030 ~ 19362041 (-)
disc1 LOC107666898,LOC107730373 other upstream 887006 19862530 ~ 19907062 (-)
LOC122357123 tsnax,LOC107557734,LOC107690806,LOC107564242,LOC107667162 other upstream 933671 19909195 ~ 19921669 (-)
LOC122356211 gng4 other upstream 1289202 20264726 ~ 20275386 (-)
G95520 NA other upstream 1504401 20479925 ~ 20486704 (-)

Expression


Co-expression Network