G95219


Basic Information

Item Value
gene id G95219
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 19920292 ~ 19976350 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU140821
cggccaagtcaaagtccagatttgaatcccattgagatgctgtggggtgacttgaaaagggctgtctgtgcaagaaacccctcaaacatctcacagcTGAAAAAGAGTGGGGTAAAATTTCCTCAGACCGATGTCGGAGACTGGTAGATGGCTACAAGAACCGTCTCACTGCCGTTATTTCAGCCAAAGGAGGTAACACTCGCTATTAGGGGCAAGGGTGTCCTATctttt

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005768 endosome cellular_component
GO:0005770 late endosome cellular_component
GO:0044433 obsolete cytoplasmic vesicle part cellular_component
GO:0044440 obsolete endosomal part cellular_component
GO:0031902 late endosome membrane cellular_component
GO:0010008 endosome membrane cellular_component

KEGG:

id description
ko04144 Endocytosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU140821 True 231 lncRNA 0.48 2 19920292 19976350

Neighbor

gene id symbol gene type direction distance location
LOC122356808 sipa1l2,LOC107667119,LOC102793238 coding upstream 114684 19689750 ~ 19805608 (+)
msh6 msh6,LOC107725009,LOC107588437 coding upstream 414863 19494929 ~ 19505429 (+)
LOC122357010 LOC107754576,LOC107679191,LOC107733337,LOC107585410,LOC107688298,LOC107597633 coding upstream 661929 19249531 ~ 19258363 (+)
zmp:0000001006 NA coding upstream 670903 19247599 ~ 19249389 (+)
tmem87b LOC107597636,LOC107688162,LOC107585411,LOC107679197,LOC107724612,LOC107733328 coding upstream 700791 19208840 ~ 19219501 (+)
LOC122356779 egln1a,LOC107690805,LOC107728333,LOC107730384,LOC107557733,LOC107667047,LOC107564238 coding downstream 3441 19979791 ~ 19995620 (+)
ggps1 ggps1,LOC107728322,LOC107730383 coding downstream 243930 20220280 ~ 20241921 (+)
gpr137ba gpr137b,LOC100001171,LOC105902257,LOC103372511,LOC100698978,LOC102208596 coding downstream 529073 20505423 ~ 20520084 (+)
LOC122356151 cox5b2,LOC107689371,LOC107689755,LOC105923605,LOC102227912,LOC106952680,LOC108240632 coding downstream 644897 20621247 ~ 20623139 (+)
LOC122356546 LOC107565068 coding downstream 677734 20654084 ~ 20661380 (+)
G95212 tsnax,LOC107690806,LOC107730374,LOC107557734,LOC107667162,LOC107564242 non-coding upstream 10177 19909266 ~ 19910115 (+)
G95195 NA non-coding upstream 51890 19866249 ~ 19868402 (+)
G95194 LOC107728326,LOC107564234,LOC107667056 non-coding upstream 52181 19862529 ~ 19868111 (+)
G95192 NA non-coding upstream 60949 19859119 ~ 19859343 (+)
G95191 NA non-coding upstream 62290 19857687 ~ 19858002 (+)
G95245 NA non-coding downstream 49297 20025647 ~ 20026888 (+)
G95254 NA non-coding downstream 81284 20057634 ~ 20058884 (+)
G95255 NA non-coding downstream 83108 20059458 ~ 20059706 (+)
G95242 NA non-coding downstream 136472 20112822 ~ 20151218 (+)
LOC122356661 NA non-coding downstream 169049 20145399 ~ 20149272 (+)
LOC122356529 LOC107667070,LOC107589360,LOC107719701,LOC107676301,LOC107733333,LOC107725060,LOC107570100 other upstream 252851 19618012 ~ 19667441 (+)
foxn2a foxn2,LOC107588458,LOC107679166,LOC107725033,LOC107667132,LOC107572676,LOC107733332,LOC108441706 other upstream 330008 19555598 ~ 19590284 (+)
lhcgr lhcgr,LOC107688869,LOC107679161,LOC107733338 other upstream 750265 19156282 ~ 19170027 (+)
G94776 NA other upstream 1288574 18545352 ~ 18631718 (+)
G94789 LOC107563058 other upstream 1382849 18536892 ~ 18537443 (+)
G95239 irf2bp2a,LOC107690807,LOC107730382,LOC107557731,LOC107728327,LOC107564236 other downstream 100935 20077285 ~ 20102120 (+)
G95327 NA other downstream 389875 20366225 ~ 20494176 (+)
dnajc12 dnajc12,LOC107728315,LOC107750135 other downstream 640833 20617183 ~ 20619621 (+)
G95558 NA other downstream 975706 20952056 ~ 20956174 (+)
G95598 adgra1,LOC107689349,LOC107567015,LOC107570923,LOC107750141,LOC107663568 other downstream 1202502 21178852 ~ 21180678 (+)

Expression


Co-expression Network