Gene
RNA
| Item | Value |
|---|---|
| gene id | G3713 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000000 |
| NCBI id | null |
| chromosome length | 19091038 |
| location | 5985395 ~ 5985599 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU4122 | True | 205 | lncRNA | 0.36 | 1 | 5985395 | 5985599 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000000_05895517_05933395 | ATP8A1 | coding | downstream | 52000 | 5895517 ~ 5933395 (-) |
| CI01000000_05877229_05888197 | NA | coding | downstream | 96574 | 5877194 ~ 5888821 (-) |
| CI01000000_05820127_05827282 | BEND4 | coding | downstream | 158113 | 5818464 ~ 5827282 (-) |
| CI01000000_05801307_05816221 | NA | coding | downstream | 169174 | 5801008 ~ 5816221 (-) |
| CI01000000_05789806_05792653 | SFXN5, SFXN5B | coding | downstream | 192742 | 5789561 ~ 5792653 (-) |
| CI01000000_06003835_06013643 | SLC30A9 | coding | upstream | 18026 | 6003625 ~ 6013643 (-) |
| CI01000000_06015043_06020725 | NA | coding | upstream | 29245 | 6014844 ~ 6020725 (-) |
| CI01000000_06129260_06131083 | LINGO2A | coding | upstream | 142654 | 6128253 ~ 6132115 (-) |
| CI01000000_06440604_06446663 | NA | coding | upstream | 454691 | 6440290 ~ 6446886 (-) |
| CI01000000_06605375_06610684 | ADRA1BB | coding | upstream | 619705 | 6605304 ~ 6610684 (-) |
| G3684 | NA | non-coding | downstream | 219888 | 5764821 ~ 5765507 (-) |
| G3683 | NA | non-coding | downstream | 220591 | 5764504 ~ 5764804 (-) |
| G3564 | NA | non-coding | downstream | 252097 | 5730489 ~ 5733298 (-) |
| G3548 | NA | non-coding | downstream | 258772 | 5723238 ~ 5726623 (-) |
| G3563 | NA | non-coding | downstream | 263122 | 5722032 ~ 5722273 (-) |
| G3512 | NA | non-coding | upstream | 39476 | 6025075 ~ 6026182 (-) |
| G3934 | NA | non-coding | upstream | 202922 | 6188521 ~ 6223257 (-) |
| G3931 | NA | non-coding | upstream | 238539 | 6157013 ~ 6403525 (-) |
| G4012 | NA | non-coding | upstream | 528057 | 6513656 ~ 6513985 (-) |
| G4014 | NA | non-coding | upstream | 529945 | 6515544 ~ 6515930 (-) |
| G3650 | NA | other | downstream | 444514 | 5540463 ~ 5540881 (-) |
| CI01000000_05465020_05466303 | NA | other | downstream | 518879 | 5464058 ~ 5466516 (-) |
| G2730 | NA | other | downstream | 1595243 | 4386383 ~ 4390152 (-) |
| CI01000000_04079738_04081018 | MIF | other | downstream | 1904278 | 4078121 ~ 4081117 (-) |
| G2484 | NA | other | downstream | 2411841 | 3570066 ~ 3573554 (-) |
| G3716 | NA | other | upstream | 14808 | 6000407 ~ 6000769 (-) |
| CI01000000_10407402_10409508 | UBL3B, UBL3.S, UBL3 | other | upstream | 4418729 | 10407395 ~ 10409950 (-) |
| CI01000000_10824957_10825464 | MMGT1, TMM32 | other | upstream | 4838812 | 10824324 ~ 10825464 (-) |
| G8125 | NA | other | upstream | 5054670 | 11040269 ~ 11040909 (-) |
