G95245


Basic Information

Item Value
gene id G95245
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 20025647 ~ 20026888 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU140852
tatatatatattatatattatatatatattatatatatataaataaatgtgcgtatgtgtgtatatacactgaaaatatatataaaaagggcAATATTCAGGTGAAATGACAAACTGAAAATACAACAGGTTAAAATTAAATCCTGattcatccaaaaatgcatTCAGGTAAAATGGATTGTGAATGCTTTACATGTTGGCTTTTGTTTCATCTATCACGCCTTCTCATAAAAACCCAAATGCCGATGTTTGCTTTAAACGGCTTGGACTACGCCACCTTTAAAGGCGGGAAACGACAAAAAACAGAAGCCTTAAAGTGCGcgcctttaaaaatattataacgCGAACGAGCGAGCTCAGCGTTTCGGCTTCTAGGCTTCTTGACAAAAGTCGCATCGTACGTCGAATAAACAGCCTTTCAAATGAAGCACGATTTGTTCGGATAGGACAGTATTCGGCTGACATACGACTGAGAAAATCGCCGCTAGCGCTGTCCAAACGAATTCTTAGCATACTATTATTTACGGTAGGAGATCTGCTAAGTGCCTTCGCGGAAcatcgatttttttttgttttgcacaaaagATAAAATCGACAACTTTGACCCATTTTCGACTCGTttcgtgctccagggtcacaacCCGTATATAACGAAGCACCTAGCAATGATGACCCAGCAACCCCGTGCTGGAAAACGCTCCAATGCATGCATTTAGCGCGTCATCGAACGAAATGATGCATTTACGAATGACCCAAACGGGCCAGAAGAAACGAGCGCGAGGGATGTGTACGGGAAGGACGGTCACCTTCACTCTCCTCGGTCCTGTGAGCGTGCACGTGCACAGGAAGCGCTCCATAATTAGACGAACCGTTTCAACGCCCGCGTTTCCAATCTTCTGTTTGGATATAATTAGCATGCATTATTTCTCGTACTTCAAAGCGCAGGTGTTTAGAAGCTCCCCTGAATAATGGAAACGCGCTCGCAGCAACAATAGAGACGGCGGGGGAAAAAACaattgctgttttctttttcttgttttgaacACAAAGCGTGCGCTTTCTGACTGAATTTAGTGAGAATGGAGTATATGGAGCGGGAACAGCTGCCTCATGTTTTTGGCTTGCTgcactgaaacacaaaagaagatgttttcGTCAATGTTAATGCtgctatttataataaaaagtatgtctACCACACTCAATTTAACtcaag

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU140852 True 1216 lncRNA 0.41 2 20025647 20026888

Neighbor

gene id symbol gene type direction distance location
LOC122356779 egln1a,LOC107690805,LOC107728333,LOC107730384,LOC107557733,LOC107667047,LOC107564238 coding upstream 30027 19979791 ~ 19995620 (+)
LOC122356808 sipa1l2,LOC107667119,LOC102793238 coding upstream 220039 19689750 ~ 19805608 (+)
msh6 msh6,LOC107725009,LOC107588437 coding upstream 520218 19494929 ~ 19505429 (+)
LOC122357010 LOC107754576,LOC107679191,LOC107733337,LOC107585410,LOC107688298,LOC107597633 coding upstream 767284 19249531 ~ 19258363 (+)
zmp:0000001006 NA coding upstream 776258 19247599 ~ 19249389 (+)
ggps1 ggps1,LOC107728322,LOC107730383 coding downstream 193392 20220280 ~ 20241921 (+)
gpr137ba gpr137b,LOC100001171,LOC105902257,LOC103372511,LOC100698978,LOC102208596 coding downstream 478535 20505423 ~ 20520084 (+)
LOC122356151 cox5b2,LOC107689371,LOC107689755,LOC105923605,LOC102227912,LOC106952680,LOC108240632 coding downstream 594359 20621247 ~ 20623139 (+)
LOC122356546 LOC107565068 coding downstream 627196 20654084 ~ 20661380 (+)
dntt dntt,LOC107689760,LOC107562388,LOC107689364 coding downstream 669101 20695989 ~ 20725867 (+)
G95219 NA non-coding upstream 49297 19920292 ~ 19976350 (+)
G95217 NA non-coding upstream 51861 19916842 ~ 19973786 (+)
G95211 NA non-coding upstream 67635 19906508 ~ 19958012 (+)
G95212 tsnax,LOC107690806,LOC107730374,LOC107557734,LOC107667162,LOC107564242 non-coding upstream 115532 19909266 ~ 19910115 (+)
G95195 NA non-coding upstream 157245 19866249 ~ 19868402 (+)
G95254 NA non-coding downstream 30746 20057634 ~ 20058884 (+)
G95255 NA non-coding downstream 32570 20059458 ~ 20059706 (+)
G95242 NA non-coding downstream 85934 20112822 ~ 20151218 (+)
LOC122356661 NA non-coding downstream 118511 20145399 ~ 20149272 (+)
G95300 NA non-coding downstream 167161 20194049 ~ 20251406 (+)
G95223 NA other upstream 21645 19947530 ~ 20004002 (+)
LOC122356529 LOC107667070,LOC107589360,LOC107719701,LOC107676301,LOC107733333,LOC107725060,LOC107570100 other upstream 358206 19618012 ~ 19667441 (+)
foxn2a foxn2,LOC107588458,LOC107679166,LOC107725033,LOC107667132,LOC107572676,LOC107733332,LOC108441706 other upstream 435363 19555598 ~ 19590284 (+)
lhcgr lhcgr,LOC107688869,LOC107679161,LOC107733338 other upstream 855620 19156282 ~ 19170027 (+)
G94776 NA other upstream 1393929 18545352 ~ 18631718 (+)
G95239 irf2bp2a,LOC107690807,LOC107730382,LOC107557731,LOC107728327,LOC107564236 other downstream 50397 20077285 ~ 20102120 (+)
G95327 NA other downstream 339337 20366225 ~ 20494176 (+)
dnajc12 dnajc12,LOC107728315,LOC107750135 other downstream 590295 20617183 ~ 20619621 (+)
G95558 NA other downstream 925168 20952056 ~ 20956174 (+)
G95598 adgra1,LOC107689349,LOC107567015,LOC107570923,LOC107750141,LOC107663568 other downstream 1151964 21178852 ~ 21180678 (+)

Expression


Co-expression Network