LOC122357128


Basic Information

Item Value
gene id LOC122357128
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22137388 ~ 22143970 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU141816
GTCATGGGTTTGGACACGTCTGTCCTGGGTGTCTGGCGTGGTTGATGGAGTCTCGGGCCGTGCTGCCGTAGGAAATAACCATAGCTCCGTAGTCTCGGTACATGCGCAGGCGAGGAGGAGAGCTGTAGGCCGGCATGATGACGAACACCGGGATACGCAGCTCCACCGCGTGATACGCCACCGCCATCGAGAAGTTACAGTCCGTGGCCACGATCACGCCCTTCCTCTGCTGATCCTGCACAGCTCAGGGTGTCTTCTGGATGCTGCTCTGCTGGAGTCTGAAGGCAGCGGCGCTGATGTCCTCGAAGCGGAGGTGGTCAGGGACAGCTTTGGCTGTAGTCTTGCTCTCTCCGCTCTTCTTCGGTGGTTTGGGTGTGGACATTAACTGGAGCTCCGCCGCTTGAGAGACGCTGCCCTCGTGGACCCTCACGTCTCCATTGAGgaggaggaggaggaggctgaggaaGAGTCTGAGGAGCACACACACTACAGCGTGAAGGAGCGTTCTCTGTGATCTGTGGAAGAGCTAGAGATGAAGACGGGTCTGGAGCAGCGGCTCTGTCTGAAGCTCCAGGAGAAGCTGAGGGAGATCTCAGCGAGAGAGCTTTGTGCGTCTCAGGAGTCGAAGGTGAACCGGTGGATGGAGGAAGAGCGGGATGGGATGAAGAACACAGAGGGTCTGCTAAACGCCGGTGAAGCTCAGACTCAGGAGGACACTGAGGAGGTTCTGGAGGCTCTCTAAGGGTTTCAGACACACACTACCCGTCAAACGTTTCTAAAACGTAAGatctttgatgtttttaaaagaagtctcttc
>XR_006252426.1
GAGGAGAGCTGTAGGCCGGCATGATGACGAACACCGGGATACGCAGCTCCACCGCGTGATACGCCACCGCCATCGAGAAGTTACAGTCCGTGGCCACGATCACGCCCTTCCTCTGCTGATCCTGCACAGCTCAGGGTGTCTTCTGGATGCTGCTCTGCTGGAGTCTGAAGGCAGCGGCGCTGATGTCCTCGAAGCGGAGGTGGTCAGGGACAGCTTTGGCTGTAGTCTTGCTCTCTCCGCTCTTCTTCGGTGGTTTGGGTGTGGACATTAACTGGAGCTCCGCCGCTTGAGAGACGCTGCCCTCGTGGACCCTCACGTCTCCATTGAGGACTTGACAGGGTTATTGCTCTCACTCATGTTTACCGcggcaggaggaggaggaggaggctgaggaaGAGTCTGAGGAGCACACACACTACAGCGTGAAGGAGCGTTCTCTGTGATCTGTGGAAGAGCTAGAGATGAAGACGGGTCTGGAGCAGCGGCTCTGTCTGAAGCTCCAGGAGAAGCTGAGGGAGATCTCAGCGAGAGAGCTTTGTGCGTCTCAGGAGTCGAAGGTGAACCGGTGGATGGAGGAAGAGCGGGATGGGATGAAGAACACAGAGGGTCTGCTAAACGCCGGTGAAGCTCAGACTCAGGAGGACACTGAGGAGGTTCTGGAGGCTCTCTAAGGGTTTCAGACACACACTACCCGTCAAACGTTTCTAAAACGTAAGatctttgatgtttttaaaagaagtctcttctgttcTCCAagcctgcttttatttgatccaaaatacagcagtGATATTGTGAATATcctactatttaaaaatgctttctattaGAGTTTTAgcagcattactccagtcacatgatcctttagaaatcgtTCTAATGTTCTGATTTGCTCGTTTATTATTATGTCTAAAACAGCTAATTAGAAATTCATCTCAAATAGAAAGcctttgtaacattacaaacatCAGTTTCGATcgatttaaatgaaatgattgaTTTCTAGAACTCAAGCTTTTAAATTGTGTAGTGTATAATTtcacaaaagctttttatttgagATAAATGCTATTCAGCAGAGGATCCTGAAAGAATGCATTGATGATAATGATAAGGATCGCGTGACTGAAAAATCTGCTTTGaaatcatttgattttaaaacattttcaaatatttacactttattcgtatttacattttaaagcagacGCTTTTCTCTCGAAAATGAAGACGGTGGAAGCAATCGAAACCAACAGAAGAGCAGTAACACGCACACAAAGATGAGTCTCTTAGTGCaatatatatgctttaaagaaaacaagtagaGAATATCAAcaaaattaagaaacaaacagaatagaaaaaagaaatctagtgtcagaaagagagcaagagaatGAATATGCCATTGATAAATGGTCaaggctgtgtttttttgtaaataaaacagacagacGGATCAAATAGAATTAGAGTAGATGTGCTAACGATGAAGGAGATGTGTCTTAGCTGTTTCTTGAAGAAGGTTAAGGACCGCTCGGATAGAGTTACACATAGAAAgcatctatattttaaatacaagtatctactgtttttgctgtactttgaaTCAAACAAGCAGCGTctcggtgagcagaagagactcgTGAAAGATCTTACGGAGGTGTCCCACCTCTGCCAGAAGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141816 False 817 TUCP 0.56 4 22138329 22143970
XR_006252426.1 True 1687 lncRNA 0.43 3 22137388 22142772

Neighbor

gene id symbol gene type direction distance location
pwwp2b pwwp2b,LOC107670800,LOC107754010,LOC107744923,LOC107653191 coding downstream 85702 22041455 ~ 22051686 (-)
LOC122356328 inpp5a,LOC107744939 coding downstream 112778 21908358 ~ 22024610 (-)
valopa valopa,LOC107689369,LOC107688178,LOC107754013,LOC107745034 coding downstream 270490 21847430 ~ 21866898 (-)
trnag-gcc_71 NA coding downstream 563067 21574251 ~ 21574321 (-)
trnag-gcc_70 NA coding downstream 723517 21413800 ~ 21413871 (-)
srfb LOC107689574,LOC107570739 coding upstream 13695 22157665 ~ 22183174 (-)
ptk7b LOC107672339,LOC107577581,LOC107742082 coding upstream 41070 22185040 ~ 22227004 (-)
zmp:0000000755 LOC107672344,LOC107742077,LOC103371009 coding upstream 110209 22254179 ~ 22283646 (-)
slc30a10 slc30a10,ypel5,LOC107672346,LOC107601641,LOC107568027,LOC107683860,LOC107568031 coding upstream 173270 22317240 ~ 22323509 (-)
LOC122356263 ypel5,slc30a10,slc30a1b,LOC107568027,LOC107672346,LOC107601641 coding upstream 341319 22485289 ~ 22489323 (-)
G95922 NA non-coding downstream 997 22135936 ~ 22136391 (-)
G95902 NA non-coding downstream 16946 22114696 ~ 22120442 (-)
G95903 NA non-coding downstream 97282 22039782 ~ 22040106 (-)
G95899 NA non-coding downstream 262459 21874513 ~ 21874929 (-)
trnag-gcc_72 NA non-coding downstream 483707 21653612 ~ 21653681 (-)
G95934 NA non-coding upstream 30356 22174326 ~ 22244477 (-)
G95933 NA non-coding upstream 84214 22228184 ~ 22230539 (-)
G95938 LOC107711401,LOC107568028,LOC107683865 non-coding upstream 104086 22248056 ~ 22370625 (-)
G95941 NA non-coding upstream 159335 22303305 ~ 22303781 (-)
G95949 lclat1,LOC107568033,LOC107742083,LOC107601640 non-coding upstream 169686 22313656 ~ 22483219 (-)
G95646 adgra1,LOC107750141,LOC107567015,LOC107663568,LOC106903219,LOC107720869 other downstream 957171 21007472 ~ 21180217 (-)
G95526 NA other downstream 1565826 20570038 ~ 20571562 (-)
G95511 NA other downstream 1640524 20493642 ~ 20496864 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other downstream 1645312 20488785 ~ 20492076 (-)
G95520 NA other downstream 1650684 20479925 ~ 20486704 (-)
tmem254 LOC107689576,LOC107653189,LOC107742085,LOC107711410 other upstream 7772 22151742 ~ 22156859 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other upstream 87479 22231449 ~ 22250313 (-)
G95932 NA other upstream 92134 22236104 ~ 22238570 (-)
G95936 lbh other upstream 152371 22296341 ~ 22297227 (-)
ypel5 ypel5,slc30a10,LOC107568027,LOC108441457,LOC103458748,LOC102788175,LOC102210471 other upstream 182735 22326705 ~ 22329292 (-)

Expression


Co-expression Network