LOC122356262 (stk32c,LOC107570736,LOC107708193,LOC107670801,LOC107653186,LOC107717191)


Basic Information

Item Value
gene id LOC122356262
gene name stk32c,LOC107570736,LOC107708193,LOC107670801,LOC107653186,LOC107717191
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22371567 ~ 22448011 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU141882
GGGACATCAAACCGGACAACATCCTCCTGGACGAGCAagGTCATGCGCATTTAACAGACTTTAACATCGCTACCATAATCAAAGACGGCGAACGAGCCACGGCGTTAGCGGGTACGAAGCCTTACATGGCTCCAGAGATCTTCCAGTCGTTCGTGAGCGGAGGAACCGGTTATGCGTTCGAGGTGGACTGGTGGTCGCTGGGCGTGACCATCTTTGAGGTTCTGCGAAGTTGGaggCCGTACGACATCCACGCCAGTAACTCGGTGGAGTCCCTGCTGCAGCTCTTCAGTACGGTCAGTGTTCAGTACAGCTCATCCTGGCACAAAGACCTCATCTCGCTGCTGAGGAAGTTATTGACCGTGAACCCCGAGCATCGCTTCTGTAGTCTGGCTCAGATGCAGACGGCTCCCTACCTCTCCGATGTCAACTGGGACGACGTTTATGAGAAGAAGATGGAGCCCGGCTTTGTTCCCAATAAAGGTCGTCTGCACTGCGACCCCACCTTTGAGCTGGAGGAGATGATTCTGGAGTCTCGTCCGCTTCATAAGAAGAAGAAACGACTGGCCAAGAACAGATCGAGAGACAACAGCAAAGATTCTCAGTNNNaaacacacacacacacacacacacacacacacacacacacacacacactcacacacaaacacatacacacacacacacacacacacacaaatacatacacacacacacaaacacacactcacactcatacacactcacacacaaacacatacacacacacacacatacacacacacacatacacacacacactacacacacacaaacacacactcattctcagac
>TU141887
aaagaaaaaatgtataaacatgatatagacatattaaaaaaagtaataaaaatgacagaaaacgagactgttttttaaaaaatgaaacgaaaatgacttttaaaaaaagaaagtttaactaaaattaaaattaaaataagatattgATTCTCGTGTATTATGTGTCAGATATGGTTTTCGTTATAACTGCTTTTTAAAGTCAAATAACGTTTGTAGCGGCTCCCAGGACACTTTTGAGCGTGTATACTTTATAGAGCTTCATAGAATACAGATAAAGTATAGAACAGAAAAGGAACAGCATCAGTGATAGAGTCAGGTCAGTAACAGAGCTGATGCTGCAAAATTCATCAATTATGAATATTAGATTCAGCTGTGCATGTAAAGAGAAAGAGTCAGTTCCTGCCACATCTATCAAACTCTCAAGTTTCTCCTACAtagcattaatattaaatgcaaagcgCTTGTGAGGTATTGCTTATGCTCCTCTGTTGTAGGACGTTGTTGATGAGTAGACATGAAATGTGCCGTTTTCTCGCTTCTTAGATGTCTCTCCTGAGAAAAAGACCTTGGTTTTATGTTTGTAAATAAGTTTCAAACTGTGGCTGATACACAAAGAGATGAACACGTTCCCTCATTAGTGTCTGAAGAATCAAACGCACACTTAAATAAAAGCCGAGATCTCCTGAGCTGAAAGACGAAGTTAACAAAAGCACGCTGAAAGAAGGTTGTGCTGACGTTCGCATGaagttatgaaaatgtaatttctctgaacattcaaaacagctttatttaCATCCCTTTTATCATTTTGCAAGCACTGTGATGTTTGTGAAGGTTACTTCTGGTTTAGTTGTTACTAATCGGATGCTATTTTTGAACGTTATCTAAACTTTCTGAAacttgcaacatttaaaaaagcctTATATAAACGTCCAACgtttcagaaatgcatttcatgattaatgttttgaaaacattcTATTAACGTTTTCAGGGTCTGTGTAATAAATGTTCTTTCATTTTGCTCCTTATTTCCTGTTTTACTCAGGAACATGTATATATGAGTATGTGtggatgtttgtgtgtgagtgagaagTGTGTTTGGTTTGTCCGATGCTTGATCGGCCCGTGTTTCGTGTTTCTGTAGTTATTGACCGTGAACCCCGAGCATCGCTTCTGTAGTCTGGCTCAGATGCAGACGGCTCCCTACCTCTCCGATGTCAACTGGGACGACGTTTATGAGAAGAAGATGGAGCCCGGCTTTGTTCCCAATAAAGGTCGTCTGCACTGCGACCCCACCTTTGAGCTGGAGGAGATGATTCTGGAGTCTCGTCCGCTTCATAAGAAGAAGAAACGACTGGCCAAGAACAGATCGAGAGACAACAGCAAAGATTCTCAGTNNNaaacacacacacacacacacacacacacacacacacacacacacacactcacacacaaacacatacacacacacacacacacacacacaaatacatacacacacacacaaacacacactcacactcatacacactcacacacaaacacatacacacacacacacacacacacacacacacacacacaca
>XM_043254793.1
AAGACGGCTGTGATGAAGGTCTGAGGCTGATGATGGGCAGGAGTCAGTCCCGTGGAGCTCCGCTGCTGTGTGAGGATGATGAGGTTTCCTTTGACCACTTTCAGATTCTCAGAGCCATTGGAAAGGGAAGCTTTGGAAAGGTGTGTATCGTGCAGAAGACAGACTCCAGGAAGATGTACGCCATGAAGTACGTGAACAAGCAGAAATGCATCGAAAGAGATGAAGTCCGAAACGTCCTCCGAGAGCTGCAGGTCATGCGACGACTCCAACATCCGTTCCTCGTCAACCTGTGGTTTTCGTTTCAGGACGAGGAGGATCTCTTCATGGTGGTGGATCTGCTGCTAGGAGGTGATTTACGCTTCCACCTGCAGAAGAAGGTGTGTTTCACCGAGCAGACGGTCAAGCTGTACGTGTGTGAGCTGGTGCTAGCGCTCGACTACCTGCAGAGCTCCAACATCATCCACCGGGACATCAAACCGGACAACATCCTCCTGGACGAGCAagGTCATGCGCATTTAACAGACTTTAACATCGCTACCATAATCAAAGACGGCGAACGAGCCACGGCGTTAGCGGGTACGAAGCCTTACATGGCTCCAGAGATCTTCCAGTCGTTCGTGAGCGGAGGAACCGGTTATGCGTTCGAGGTGGACTGGTGGTCGCTGGGCGTGACCATCTTTGAGGTTCTGCGAAGTTGGaggCCGTACGACATCCACGCCAGTAACTCGGTGGAGTCCCTGCTGCAGCTCTTCAGTACGGTCAGTGTTCAGTACAGCTCATCCTGGCACAAAGACCTCATCTCGCTGCTGAGGAAGTTATTGACCGTGAACCCCGAGCATCGCTTCTGTAGTCTGGCTCAGATGCAGACGGCTCCCTACCTCTCCGATGTCAACTGGGACGACGTTTATGAGAAGAAGATGGAGCCCGGCTTTGTTCCCAATAAAGGTCGTCTGCACTGCGACCCCACCTTTGAGCTGGAGGAGATGATTCTGGAGTCTCGTCCGCTTCATAAGAAGAAGAAACGACTGGCCAAGAACAGATCGAGAGACAACAGCAAAGATTCTCACTTTCAGCACCGGAGCTTCTCCTGGAGCACGGCGAGCTATTTCTGGCGTCTTCCAGCAGGAACAGAGTTCAGAGCTCGACGCGAGCCGCTGCAGCAGGTCACCGAGCTCAGAGCCCGCTCACGAGACGTCTCTCTGTTTTCCTCGCAGGAGAACGAGTATCTTCAGGAGTGCCTTGAAGTTGTCCAGCAGGAGTTCATGATCTTCAACCGTGAAAAGTGA

Function

symbol description
stk32c Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation.

NR:

description
PREDICTED: serine/threonine-protein kinase 32C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141882 False 831 TUCP 0.51 8 22379092 22443286
TU141887 True 1592 TUCP 0.38 3 22371567 22438998
XM_043254793.1 False 1286 mRNA 0.54 11 22435248 22448011

Neighbor

gene id symbol gene type direction distance location
slc30a10 slc30a10,ypel5,LOC107672346,LOC107601641,LOC107568027,LOC107683860,LOC107568031 coding downstream 48058 22317240 ~ 22323509 (-)
zmp:0000000755 LOC107672344,LOC107742077,LOC103371009 coding downstream 87921 22254179 ~ 22283646 (-)
ptk7b LOC107672339,LOC107577581,LOC107742082 coding downstream 144563 22185040 ~ 22227004 (-)
srfb LOC107689574,LOC107570739 coding downstream 188393 22157665 ~ 22183174 (-)
pwwp2b pwwp2b,LOC107670800,LOC107754010,LOC107744923,LOC107653191 coding downstream 319881 22041455 ~ 22051686 (-)
LOC122356263 ypel5,slc30a10,slc30a1b,LOC107568027,LOC107672346,LOC107601641 coding upstream 37278 22485289 ~ 22489323 (-)
LOC122356266 LOC107671403,LOC107756883,LOC107688264,LOC107592480,LOC107592170 coding upstream 354707 22802718 ~ 22819457 (-)
c1d c1d,LOC107551342,LOC107754748,LOC107717833,LOC107702672,LOC107660245 coding upstream 686807 23134818 ~ 23136642 (-)
LOC122356317 psap,LOC107575616 coding upstream 709091 23157102 ~ 23167091 (-)
mrps6 LOC107717855,LOC107702688,LOC107660242,LOC107754760,LOC107575615 coding upstream 719862 23167873 ~ 23168903 (-)
G95938 LOC107711401,LOC107568028,LOC107683865 non-coding downstream 942 22248056 ~ 22370625 (-)
G95941 NA non-coding downstream 67786 22303305 ~ 22303781 (-)
G95934 NA non-coding downstream 127090 22174326 ~ 22244477 (-)
G95933 NA non-coding downstream 141028 22228184 ~ 22230539 (-)
G95922 NA non-coding downstream 235176 22135936 ~ 22136391 (-)
G95937 lbh non-coding upstream 17135 22465146 ~ 22471340 (-)
G95984 NA non-coding upstream 73005 22521016 ~ 22521948 (-)
G95985 NA non-coding upstream 73944 22521955 ~ 22523449 (-)
G95990 NA non-coding upstream 173031 22621042 ~ 22621428 (-)
G95992 NA non-coding upstream 186255 22634266 ~ 22634490 (-)
ypel5 ypel5,slc30a10,LOC107568027,LOC108441457,LOC103458748,LOC102788175,LOC102210471 other downstream 42275 22326705 ~ 22329292 (-)
G95936 lbh other downstream 74340 22296341 ~ 22297227 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other downstream 121254 22231449 ~ 22250313 (-)
G95932 NA other downstream 132997 22236104 ~ 22238570 (-)
tmem254 LOC107689576,LOC107653189,LOC107742085,LOC107711410 other downstream 214708 22151742 ~ 22156859 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other upstream 373970 22821981 ~ 22823259 (-)
G96053 NA other upstream 546026 22994037 ~ 22995599 (-)
si:ch211-130h14.4 LOC107660236 other upstream 981635 23429646 ~ 23444063 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other upstream 1894738 24342749 ~ 24344657 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other upstream 1951112 24399123 ~ 24404715 (-)

Expression


Co-expression Network