G96053


Basic Information

Item Value
gene id G96053
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22994037 ~ 22995599 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU142008
TTTCATAGAGGCGGCGATAGcgctcttcctttttctctttgtttcctccgttctcttgcgcttaaaaactgcccgcattctccaccacttgtggcgaggcagaggaagcacaagagaaacgggtgcagtgaaaacccccggagggtgtatttattagacaatacacagaaggtgagcggtgagtccgtgcgaggagtgcggcggtgagtccgggggtggtgtagcggtgaatccggtgagtgcagcggtgagtcgtctcggtgtttcccgtgcttagtaccgtgagggagtccactgtgaggtagtaggggaagtagctcaggcaggcccgtcacgttgtagcttctgggagacaaagaaagagacaacaggttagcttgcgtttccggagtctcgtggctccctgaagccgtcgcctggccgggcttatctggcccgcggctgatgagctccaggtgtggcgaatccgtcgttgagtggctggtgtaggtgttccgtgtttgttcccagggcaacgctgatcgatcctcggg
>TU142010
ccgTTTCCGCGGTTCCGCGCGCGGGGTAGAaggcgggactgaaccaggctgatggtactgccagagtcaaggagggctCTGAACTTCCGTCCATTCAGGCCGACGGGGATTTCCGGTGCGGCGCGGGGAAGCTCCCGGTGGagactgcagcctgccagccacgctctagaggagttggaagcctcttcggttggcatcggctcatctttcacggtcgggaccgccgcccTCTCCATCGGTCGCCGGGTGCCCTCCGCGCGCGTCGCTCcctgggacaccctccggggaaaagatggcgcccgctCCCCGGCCTCTCGACGCTGTgcggcttccgccagctcgaccgcctcaaccaactccatgacgttcttggggtttctcataccgaccgcctggcgataattccgggggagagcccgcaggagccggtctatcaccaccctttccacaatgatggcgggggttggtgtcccgtccaggagccagtgttgcgctagccgagtaagttcggcagcctgggtccttgccggctggcgagactggaagacccactcttggaaggcttgggctgcgcagaccggtgacagaccgaccctgcccaagatttccctctttaggtcgtcgtatacattcgccaggtcggccggcatgctgaaataggcgcgctggggctctcctgacagcagcggggccaACGCCACGTGCCCAATCCCTCCGGTCCCATCCTTCCGTGGTTGCGACGCTCTCGAACATCTCGAGATATATTTCAGGGTCATCGCTGGCGGCCATTTTGGgtagcagctgtgtggcttgcatccggggatcaggcacgacggggcgtggttgagtggcggcgcggagagcagcgagctcctgctcggtctcgttctggcgggtagccaaatgctcgacgatctgttgctggcgaatggaaacc
>TU142011
TTTCATAGAGGCGGCGATAGcgctcttcctttttctctttgtttcctccgttctcttgcgcttaaaaactgcccgcattctccaccacttgtggcgaggcagaggaagcacaagagaaacgggtgcagtgaaaacccccggagggtgtatttattagacaatacacagaaggtgagcggtgagtccgtgcgaggagtgcggcggtgagtccgggggtggtgtagcggtgaatccggtgagtgcagcggtgagtcgtctcggtgtttcccgtgcttagtaccgtgagggagtccactgtgaggtagtaggggaagtagctcaggcaggcccgtcacgttgtagcttctgggagacaaagaaagagacaacaggttagcttgcgtttccggagtctcgtggctccctgaagccgtcgcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142008 False 533 lncRNA 0.57 1 22994037 22994569
TU142010 True 937 TUCP 0.64 1 22994663 22995599
TU142011 False 418 lncRNA 0.56 1 22994152 22994569

Neighbor

gene id symbol gene type direction distance location
LOC122356266 LOC107671403,LOC107756883,LOC107688264,LOC107592480,LOC107592170 coding downstream 174580 22802718 ~ 22819457 (-)
LOC122356263 ypel5,slc30a10,slc30a1b,LOC107568027,LOC107672346,LOC107601641 coding downstream 504714 22485289 ~ 22489323 (-)
slc30a10 slc30a10,ypel5,LOC107672346,LOC107601641,LOC107568027,LOC107683860,LOC107568031 coding downstream 670528 22317240 ~ 22323509 (-)
zmp:0000000755 LOC107672344,LOC107742077,LOC103371009 coding downstream 710391 22254179 ~ 22283646 (-)
ptk7b LOC107672339,LOC107577581,LOC107742082 coding downstream 767033 22185040 ~ 22227004 (-)
c1d c1d,LOC107551342,LOC107754748,LOC107717833,LOC107702672,LOC107660245 coding upstream 139219 23134818 ~ 23136642 (-)
LOC122356317 psap,LOC107575616 coding upstream 161503 23157102 ~ 23167091 (-)
mrps6 LOC107717855,LOC107702688,LOC107660242,LOC107754760,LOC107575615 coding upstream 172274 23167873 ~ 23168903 (-)
micu1 micu1,LOC107702683,LOC107754762,LOC107717828,LOC107660220 coding upstream 188316 23183915 ~ 23238517 (-)
pla2g12b pla2g12b,LOC107702679,LOC107551354,LOC107564523,LOC107660215 coding upstream 329183 23324782 ~ 23329933 (-)
G96044 NA non-coding downstream 159625 22833829 ~ 22834412 (-)
G95997 NA non-coding downstream 334725 22658667 ~ 22659312 (-)
G95995 NA non-coding downstream 336133 22657670 ~ 22657904 (-)
G95992 NA non-coding downstream 359547 22634266 ~ 22634490 (-)
G95990 NA non-coding downstream 372609 22621042 ~ 22621428 (-)
G96060 NA non-coding upstream 10680 23006279 ~ 23007463 (-)
G96061 NA non-coding upstream 21599 23017198 ~ 23029900 (-)
G96108 NA non-coding upstream 156606 23152205 ~ 23154495 (-)
G96117 NA non-coding upstream 181203 23176802 ~ 23178096 (-)
G96254 myom2,LOC107566060,LOC107660212,LOC107702662,LOC107717844,LOC107572023 non-coding upstream 543179 23538778 ~ 23542300 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other downstream 170778 22821981 ~ 22823259 (-)
LOC122356262 stk32c,LOC107570736,LOC107708193,LOC107670801,LOC107653186,LOC107717191 other downstream 546026 22371567 ~ 22448011 (-)
G95972 NA other downstream 571168 22420936 ~ 22422869 (-)
ypel5 ypel5,slc30a10,LOC107568027,LOC108441457,LOC103458748,LOC102788175,LOC102210471 other downstream 664745 22326705 ~ 22329292 (-)
G95936 lbh other downstream 696810 22296341 ~ 22297227 (-)
si:ch211-130h14.4 LOC107660236 other upstream 434047 23429646 ~ 23444063 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other upstream 1347150 24342749 ~ 24344657 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other upstream 1403524 24399123 ~ 24404715 (-)

Expression


Co-expression Network