G96279


Basic Information

Item Value
gene id G96279
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24042528 ~ 24067735 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU142336
ttttttttttttttgttttaataatattgagCCATGTCCAAAAGGTAAAGAGGAAGGTTTTGCTACAATTTATAGCAGTACtctcagtacttctcagagggcatgctttaagtataactcatttaaaGTAAATCCCCTGTCATGTTTGTGCTGGATACTGTATACAGGTCATCAAGGCACCACacagattttattaaagaatttgctgatttttgagttggctgcagataaagtttttattactggtgattttaatatccatgttgataatgaaaaagatgaacTGTACACCTTATCTAGCTGCACCGTAGTTTGATTTAACCTATTAGTAGGgatgtgttgtattacaaatttataaaaggttaaacacagattccaatataacagtatatgctgaatgtgtattgtgatttacattctaagagcaggaagcccaagccccgagacagttatcttttgtctttcagttcttgaacatctggtaggtgtcctaagtcaagtgtgaatgctaatcctaaggtacaactgtgccttttgtttcacctatgcatttgaatgacacttggatgctaaatagatcaaggatcgggaaagttcctgttctgggctaagttcctgatctgcatttgcatacttttgttttactggtctccacctctgtgtactcctcccccttgaaacatataaacttcaaactagcatgtttcagttagatttgtttcttggagatttcttgaagattttcttggagattgcttgattttcttaaagatttcttgaagacttcttgcagatgactacagcaatgaaataaaaacaaactcctgctttaccaagaatctcctggtctccacctctatgtactcctcccccttaaAACCTATATACTCCACTGTGCTGGGTAATAGTTAGATTTCTTGGAGAATTTTTTGAAGATTTCTTGCAGACTTCTTGATGACTTCAGCGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142336 True 969 lncRNA 0.36 2 24042528 24067735

Neighbor

gene id symbol gene type direction distance location
csmd1a csmd1,LOC107702659,LOC107717843,LOC106589815 coding downstream 46935 23633716 ~ 23995593 (-)
rnaset2 LOC107750751,LOC107702666,LOC107717820,LOC107566062,LOC107660213 coding downstream 522874 23513815 ~ 23519654 (-)
rps6ka2 rps6ka2,LOC107750746,LOC107717821,LOC107702677 coding downstream 536836 23465789 ~ 23505692 (-)
sft2d1 sft2d1,LOC107660214,LOC102776618 coding downstream 577677 23447333 ~ 23464851 (-)
prr18 prr18,LOC107750748,LOC107702669,LOC107717824,LOC107660240,LOC107564522 coding downstream 596362 23444179 ~ 23446166 (-)
LOC122357144 NA coding upstream 202579 24270314 ~ 24270449 (-)
LOC122356174 polr1c coding upstream 231200 24298935 ~ 24302415 (-)
inaa inaa,LOC107588658,LOC107656930,LOC107707692,LOC107716329,LOC107673959 coding upstream 243292 24311027 ~ 24313946 (-)
cnnm2a cnnm2a,LOC107716327,LOC107588659,LOC107673921,LOC107585325 coding upstream 260130 24327865 ~ 24341452 (-)
wbp1la LOC107694985,LOC107716324,LOC107585326,LOC107673922,LOC107588740,LOC107708389 coding upstream 283112 24350847 ~ 24361296 (-)
G96265 NA non-coding downstream 114468 23927331 ~ 23928060 (-)
G96254 myom2,LOC107566060,LOC107660212,LOC107702662,LOC107717844,LOC107572023 non-coding downstream 500228 23538778 ~ 23542300 (-)
G96117 NA non-coding downstream 864432 23176802 ~ 23178096 (-)
G96108 NA non-coding downstream 888033 23152205 ~ 23154495 (-)
G96061 NA non-coding downstream 1012628 23017198 ~ 23029900 (-)
G96286 NA non-coding upstream 2425 24070160 ~ 24070488 (-)
G96295 NA non-coding upstream 39698 24107433 ~ 24107818 (-)
G96301 NA non-coding upstream 182698 24250433 ~ 24250755 (-)
G96303 NA non-coding upstream 196933 24264668 ~ 24264917 (-)
G96329 NA non-coding upstream 206960 24274695 ~ 24282617 (-)
si:ch211-130h14.4 LOC107660236 other downstream 598465 23429646 ~ 23444063 (-)
G96053 NA other downstream 1046929 22994037 ~ 22995599 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other downstream 1219269 22821981 ~ 22823259 (-)
LOC122356262 stk32c,LOC107570736,LOC107708193,LOC107670801,LOC107653186,LOC107717191 other downstream 1594517 22371567 ~ 22448011 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other upstream 275014 24342749 ~ 24344657 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other upstream 331388 24399123 ~ 24404715 (-)

Expression


Co-expression Network