G96295


Basic Information

Item Value
gene id G96295
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24107433 ~ 24107818 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU142361
acccgtgtgtttctggatgcggttgttacctggtgttaggtgatggtcacaatcgttgcctcgtgtgcctgggctgagcatgctgaggtggcggttgtggatgaatcatttcctcgcggggagatggtcatctcggagtgatgggcgggctctgtcgccttgaaaaaaggaggcggagcttgtgtttgctcgacttggttctcattctggctgcagacaggtgggctccatttcgttgtgacacaaagcttaaactctgcaaccagtggagctgcaaaaggggcagtctggaccctcacgtggggtatcagctgtaccctcttgggctccccctgatgatcagaagtcaatcgctgcatcggaaggtgagccagacatttctggaa

Function

GO:

id name namespace
GO:0009078 pyruvate family amino acid metabolic process biological_process
GO:0009080 pyruvate family amino acid catabolic process biological_process
GO:0042851 L-alanine metabolic process biological_process
GO:0042853 L-alanine catabolic process biological_process
GO:0006522 alanine metabolic process biological_process
GO:0006524 alanine catabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142361 True 386 lncRNA 0.55 1 24107433 24107818

Neighbor

gene id symbol gene type direction distance location
angpt2a angpt2,angpt2a coding downstream 49529 24043636 ~ 24057904 (-)
csmd1a csmd1,LOC107702659,LOC107717843,LOC106589815 coding downstream 111840 23633716 ~ 23995593 (-)
rnaset2 LOC107750751,LOC107702666,LOC107717820,LOC107566062,LOC107660213 coding downstream 587779 23513815 ~ 23519654 (-)
rps6ka2 rps6ka2,LOC107750746,LOC107717821,LOC107702677 coding downstream 601741 23465789 ~ 23505692 (-)
sft2d1 sft2d1,LOC107660214,LOC102776618 coding downstream 642582 23447333 ~ 23464851 (-)
LOC122357144 NA coding upstream 162496 24270314 ~ 24270449 (-)
LOC122356174 polr1c coding upstream 191117 24298935 ~ 24302415 (-)
inaa inaa,LOC107588658,LOC107656930,LOC107707692,LOC107716329,LOC107673959 coding upstream 203209 24311027 ~ 24313946 (-)
cnnm2a cnnm2a,LOC107716327,LOC107588659,LOC107673921,LOC107585325 coding upstream 220047 24327865 ~ 24341452 (-)
wbp1la LOC107694985,LOC107716324,LOC107585326,LOC107673922,LOC107588740,LOC107708389 coding upstream 243029 24350847 ~ 24361296 (-)
G96286 NA non-coding downstream 36945 24070160 ~ 24070488 (-)
G96279 NA non-coding downstream 39698 24042528 ~ 24067735 (-)
G96265 NA non-coding downstream 179373 23927331 ~ 23928060 (-)
G96254 myom2,LOC107566060,LOC107660212,LOC107702662,LOC107717844,LOC107572023 non-coding downstream 565133 23538778 ~ 23542300 (-)
G96117 NA non-coding downstream 929337 23176802 ~ 23178096 (-)
G96301 NA non-coding upstream 142615 24250433 ~ 24250755 (-)
G96303 NA non-coding upstream 156850 24264668 ~ 24264917 (-)
G96329 NA non-coding upstream 166877 24274695 ~ 24282617 (-)
G96411 NA non-coding upstream 498312 24606130 ~ 24606376 (-)
G96415 NA non-coding upstream 522735 24630553 ~ 24675946 (-)
si:ch211-130h14.4 LOC107660236 other downstream 663370 23429646 ~ 23444063 (-)
G96053 NA other downstream 1111834 22994037 ~ 22995599 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other downstream 1284174 22821981 ~ 22823259 (-)
LOC122356262 stk32c,LOC107570736,LOC107708193,LOC107670801,LOC107653186,LOC107717191 other downstream 1659422 22371567 ~ 22448011 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other upstream 234931 24342749 ~ 24344657 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other upstream 291305 24399123 ~ 24404715 (-)

Expression


Co-expression Network